Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  --------->ARR14(3)                                          -------                                  <---------ARR14(3)               <---------GLK1(1)          -------                             <---------WOX13(1)   <---------MYB46(3)                          <------                           --------->ATHB12    <-----------RAV1(1)<---------ARR14(2)          <------                           <---------ICU4     <---------TOE2(3)   --------->ARR14(2)       <---------TOE2(3)                          <---------YAB1<---------ANAC58     --------->At4g35610           <---------TOE1(3)   --------->ATHB12       --------->ICU4<---------ANAC46     --------->ZAT2         <---------ANAC58  <---------YAB1        --------->YAB1  <---------ANAC58     <---------ZAT2         <---------ANAC58< ---ANAC58       --------->GLK1(2)<---------ARR11(3)         <---------At4g35610  <-----------GT1   < ---ANAC58       <-----------ARR10--------->ARR11(3)        <---------AGP1 <------ZmHOX2a(1) <------ZmHOX2a(1)   gacgatgtttggatgagataatcttctcatgattgagatctcgcgtttgatgttgttggctagagctggatttgtgaggagttttttcttgttgaggatt  12945500                                  <---------ANAC58                               ------->PIF5                               <-------MYC4                               <-------MYC2                               <-------PIF5                               ------->MYC3                               <-------MYC3                               <-------PIF4                               ------->PIF4                               ------->MYC2                              <---------ANAC46                   --------->LBD16                              --------->O2                       --------->HSFB2a(2)                              <---------O2                   <---------ARR14(2)                              <---------TGA1a                --------->ARR14(2)                              --------->TGA1a              <------NtERF2                              <---------ANAC58             <---------ATERF1(1)                              <---------ANAC55(2)         --------->RAP2.6(2)                              =========================bZIP_DOF  <---------HSFB2a(2)                              <---------ANAC58            --------->RRTF1(2)                              --------->ANAC55(2)         --------->DEAR3(1)          ==============================bZIP_DOF          --------->RAP2.3(2)          <----------DOF2    ------------>OsbHLH66        --------->RAP2.3(3)      <------NtERF2  <---------TOE1(1)                   <------NtERF2     <---------ATERF1(1)    <------------OsbHLH66        --------->ATERF1(1)               ----------     ------>NtERF2<---------SPL7--------->ALFIN1         --------->RAP2.3(1)               <---------MYB59    <---------DEAR3(1)     <------ZmHOX2a(2)             --------->ORA47(2)                <---------    ----------->HVH21<---------TOE2(1)                   --------->DEAR4(2)               -----------    --------->DEAR3(1)    <-----------HVH21             <---------RAP2.3(1)          <---------ICU4 --------->ANAC46 <---------MYB52(1)                    <---------ATERF1(1)    --------->ZAT2       < -->ARR11(3)     <---------DEAR3(2)                    --------->ANAC46        <---------ZAT2    ---- -->ARR14(2)    <---------MYB46(3)<---------ANAC46    --------->ZAT18--------->GLK1(2)    ----------- ---ARR11(3)    <---------ATERF1(2)                   <---------ABI4(2)        <---------At4g35610  < ---ARR14(2)   <---------ORA47(1)<-------TEIL       <---------ARR14(2)--------->HSFC1(2)  <---------- ---------At5g28300 --------->SPL7<---------ANAC58  --------->ARR14(2)<---------HSFC1(2) <---------At5g28300 ---------LBD16<---------ANAC46------->MYC4 <----------DOF2------>NtERF2<----------DOF2 <-----------GT1   ttcacggcgacgctttggccggtacgacgatcacgtgcgtggaagactttggcgaatgcgccgcatccgagaagctttccgagctcatatttaccgaata  12945600                         --------->RAP2.6(2)                         ------>NtERF2                        <---------ATERF1(2)                        --------->ATERF1(2)                        <---------DEAR3(1)                       --------->ATERF1(1)                       --------->RAP2.3(1)                       <------NtERF2                      <---------ERF1                      <---------ATERF1(1)                      --------->LBD16                      <---------ORA47(2)                      <---------RAP2.3(1)                      <---------RRTF1(1)                      ------>NtERF2                     <---------RAP2.3(2)                     --------->DEAR3(1)                     --------->ATERF1(2)                     <---------ATERF1(2)                     <---------RAP2.3(3)                     <---------DEAR3(1)                     <---------DREB2C(2)                    <---------LBD16                    --------->ATERF1(1)                   ------>NtERF2                   --------->ZAT2                   <---------ATERF1(1)                  ----------->HVH21                  --------->DEAR3(1)                --------->ZAT2                <---------ATERF1(1)                --------->At4g35610               --------->DEAR3(1)              --------->ATERF1(1)         <-----------RAV1(1)    <-------GAMYB--------->ATERF1(1)  <------NtERF2<---------DEAR3(1) ----->AGL15  <------NtERF2 ------AGL15  --------->RAP2.3(1) ------>AG<-----------HVH21                     <---------WOX13(1) ---------ANAC58------>NtERF2                 --------->ATHB12          <---------YAB1          ----- ----->DAG2  ------>NtERF2<------NtERF2      --------->ICU4       --------->ATHB12          <------NtERF2 ------>AGL1 <---------RAP2.3(1)             <---------YAB1     <---------WOX13(1)        --------->DEAR3(1) ---------ANAC58<---------At4g35610  ------>ZmHOX2a(2)     --------->LBD16   --------->YAB1--------->LBD16 -------AGL1<---------DEAR3(1)      <---------GLK1(1)  ------->TEIL <---------WOX13(1)   <---------LBD16   aggcgtcgttgttgtcgccgctgccggcggcaatctcgatctctggcatgattgatgaatccagagattgattgatgaataagaaaacttcgccggagaa  12945700                  --------->ANAC46                  --------->ANAC58           <---------At4g35610                  --------->ANAC58          --------->ANAC58                 --------->LBD16            --------->ANAC58                                 --------                <---------ANAC46        --------->ANAC58                                     <-------                <---------ANAC58        --------->ANAC55(1)                                  <-------          <---------ANAC58              <---------ANAC55(2)                                  <-------          <---------ANAC46              --------->ANAC46                                    <--------          <---------ANAC58 <---------At4g35610        <<<<<<<<<TBF1                         <--------       <---------MYB52(1)  --------->At4g35610        <------------------------ANAC81     <----------  ------->TEIL  <---------ANAC58        --------->ANAC55(2)  <----------DOF2              <---------AHL20(2) ---->GLK1(2)  <---------LBD16          --------->ANAC58    <------------------------ANAC81 <--------   tttgaatctgtttcgtttgcgcgtaatgcagatgtgatgaacacgtaagctaattcttcttctctttttttttttttggttttgttgtgaatttactttt  12945800                                                                       <----------DOF2                                                                 --------->LBD16                                                                --------->ANAC46                                                               <---------LBD16                                                              <---------ANAC46                                                            --------->SPL7                                                            ---------->DOF2                                                         <---------ANAC58                                                         <---------bZIP60(1) ------->AGL15                                           <---------ANAC46 --DAG2                                    <---------ANAC46----------->HVH21                        - --------AGL15               <---------TOE1(3)           <---------ANAC55(2)                        < ---DOF2                     <---------TOE2(3)           <---------ANAC58                           - ---------AGL1               --------->MYB59       --------->ALFIN1  --------->HSFC1(2)            <- ---------AGL3      --------->DAG2  --------->AHL20(2)   --------->bZIP60(1)                       <- -GT1--------->YAB1---------->DOF2  <---------AHL20(2)   --------->ANAC55(2) ---------->DOF2       -- ---------AGL2 ---------->DOF2--------->ANAC55(2)  ----------->HVH21 <---------HSFC1(2)          ----   tatggaataagaaatttgaaagaaagtggtttaggtatttaaatggtggagaagtgatggcgtaacgcggaagcttttaaaaagataagttcgatagaat  12945900                                                                          <---------MYB52(1)                                                                         <-----------HVH21           *TSS                                                        <------------AtMYB77         <---------TOE1(3)                                             <------------MYB.PH3(1)         <---------TOE2(3)                                            <---------At5g28300 ------->HAHB4                         --------->DAG2                <-----------GT1           ------ ---------ICU4                   <---------------AGL15               ------------>MYB.PH3(1) -------- -------->YAB1                   --------------->AGL15            --------->ANAC55(2)    <-------GAMYB --------ATHB51                 <---------ANAC46               <---------AHL20(2)       <---------MYB46(3) --------YAB1     <---------TOE2(3)   ---------->DOF2         --------->YAB1            --------->MYB52(2) ------->ICU4   ---------->DOF2 ----------------->AGL1        --------->AHL20(2) --------->GLK1(2)--- ----->YAB1----------->GT1      ----------------->AGL3       <---------YAB1     <---------GLK1(2) ---   aataatggattaagggtataaaggaattagagttgcctaaaaaaggagtttaactgaagcactattatatgtaaccgttacagaatttgtttgttgtcaa  12946000                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                        ----------->RAV1(2)                                                                                       --------->MYB52(1)                                                                                       -------->P                                                                                      ------->GAMYB                <---------TOE1(3)                                            ------->GAMYB   <-------       <---------AHL20(2)                                                    ----------->HVH21 <-----       --------->AHL20(2)                                                 --------->MYB52(1) --------       --------->AHL20(1)                                            --------->ICU4  <---------MYB52(2)  --------->AHL20(2)                                                 <---------YAB1  --------->MYB46(3)  <---------AHL20(2)                                               --------->YAB1    <---------MYB111(1) --->WOX13(1)  ---------->DOF2                                  <---------ZAT6       <---------MYB111(2) ---->CBF  ----------->GT1<-----------GT1               <---------TOE2(3)--------->AHL20(2)  -------- ------>AHL20(2)<---------TOE2(3)   <---------AHL20(2)  <---------TOE1(3)<---------AHL20(2)  <------- ------>YAB1--------->TOE2(3)      --------->AHL20(2)----------->HVH21--------->YAB1 <---------MYB46(2)   ttaaaaaaataaaatgttaaagtttttttaacccaaattttatatatgtgaagcagtgaaggtttactgttataattaactgacacaactacctgagcac  12946100 ---->ANAC58 ---->ANAC58 ---->ANAC46 --->ZAT18 --At4g35610                                                        <------------AtMYB77      ------- ----ZAT18                                                     --------->ANAC58               <------ ->At4g35610           ----------------->AGL3<---------WOX13(1)--------->ANAC58              <------- ->ZAT14           ---------->DOF2        <---------AHL20(2)  --------->DAG2                ------->TEIL --ZAT18      <---------ALFIN1  <---------At4g35610          ---------->DOF2        <-------TEIL   acaatccatctattcaacacatgaagccaaatttagccgataatgtaattgatagtcttcacataaagcaactgttcttgagtcgatgcatatgtatatc  12946200                                                                      <---------ANAC55(2)                                                                      <---------bZIP60(2)                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                    <-----------GT1                                                                 <--------HAHB4                                                                 --------->ATHB51                                                                 --------->YAB1                                                                 -------->HAHB4                                                                 <---------ICU4                                                                 -------->ATHB1                                                                <---------ATHB51                                                                <---------YAB1                    <--                                                              ------>MYB46(1)                  <-----                                                              ------>MYB83                   <-------                                                            <---------MYB111(1)              --------                                                            <---------MYB59                  --------                                                           --------->ANAC46                  --------                                                           --------->ANAC55(1)               <-------      XXXXXXXXXXXXXXXXXXXX>MIR407                     <---------ZAT14 <---------ANAC55(1)   ---------    ------>ZmHOX2a(1)                                 --------->ZAT14 <---------ANAC46      <--------   --------->TOE2(3)                                  <---------ZAT18 --------->ANAC55(2)   <--------   --------->TOE1(3)                                  --------->REM1(2)                --------->ANAC46 -->ARR11(3)                                        --------------->AtSPL8             --------->ANAC58 ---ARR11(3)         <-----------GT1             --------->ZAT14<---------ATHB12       --------->ANAC58 --CCA1(2)--------->YAB1                         <---------ZAT14--------->ICU4--------------->AtSPL8   tagttccttaaatcatatagttttttcattttgtacaatcgatctacagactacagtgtacacctaattattacgtggtttttgtactcactcaattatt  12946300                                         --------->ICU4                                         <---------YAB1                                  --------->ANAC55(2)                                  <---------O2                                  <---------ANAC58    --------->ETT(2)              <---------ANAC55(2)    <---------ETT(2)              <---------ANAC46 ---------RAV1(1)                 --------->O2                                           <-----------GT1 ----YAB1                         <---------TGA1a                               --------->TOE2(1) --ICU4                   --------->At4g35610                                   --------->TOE1(1) >ATHB1                   ==========================HOX2a_HOX2a                --------------->AtSPL3 ->ATHB51        <---------DAG2   --------->TGA1a                              --------------->AtSPL8 ->YAB1          ===========================bZIP_DOF<---------ANAC55(2)        <---------HSFB2a(2) -HAHB4          <----------DOF2  <---------ANAC58  --------->ANAC55(2)        --------->HSFB2a(2) >ICU4<---------MYB52(1)  <---------At4g35610------>ZmHOX2a(2)      --------->YAB1   <---------DAG2 -ATHB51      <-----------GT1------>NtERF2 <---------ARR11(3)       <---------ICU4   <----------DOF2 -ATHB12--------->MYB52(2)------>ZmHOX2a(1)--------->ARR11(3)      <---------YAB1  <---------TOE1(2)   atgttgtcgatagtttctactttatttcctctgcctacgtgtcatgatcttatcacttaacttactctgatcataactcttctcgtactttttacatcta  12946400  Previous    Next  AGI:  At2g30360.1    Description:  CIPK11 (SOS3-INTERACTING PROTEIN 4); kinase. Identical to CBL-interacting serine/threonine-protein kinase 11 (CIPK11) [Arabidopsis Thaliana] (GB:O22932;GB:Q7FYB7;GB:Q944I6); similar to ATSR1 (SERINE/THREONINE PROTEIN KINASE 1), kinase [Arabidopsis thaliana] (TAIR:AT5G01820.1); similar to CBL-interacting protein kinase 16 [Populus trichocarpa] (GB:ABJ91223.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro d Range:  from: 12944056    to: 12945911    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g30362.1    Description:  other RNA Range:  from: 12944428    to: 12946715    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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