Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->ANAC58                                          --------->ANAC46                                     <---------ANAC46                            <---------ANAC46                            <---------ANAC58                       --------->MYB52(1) --------->ANAC58                       <-----------GT1------>NtERF2                 ------>NtERF2       --------->bZIP60(1)               --------->ZAT18       <---------bZIP60(1)       <-----------------AGL1               <---------ZAT18       <---------ATERF1(2)   <---------ANAC58              <---------RAP2.3(1)    --------->ATERF1(2)   <---------ANAC58             <---------RAP2.3(3)    --------->RAP2.6(3)  --------->MYB52(2)             <---------RAP2.3(2)   --------->MYB52(1)    <---------MYB46(3)             --------->HSFB2a(1)             --------->ANAC46     ----------->HVH21    <---------MYB52(1)   <------NtERF2<---------GLK1(2)            <---------At5g28300   ----------->TGA1--------->ARR14(2)       <-----------------AGL1         <----------DOF2<---------At5g28300       <---------ARR14(2)       ------>NtERF2<---------HSFB2a(1)        --------->TOE2(3)   <---------ANAC58    <---------ATHB12          <---------ALFIN1--------->GLK1(2)        --------->TOE1(3) ------->GAMYB<------NtERF2------>ZmHOX2a(2)     --------->DEAR3(1)  ------>ZmHOX2a(1)   tgatcagaaacctttacggcgctattaacggcgtgagtgacggcaagccactgatccgtttgtttgccgaatttcgccaccgtaatggcaagattcctaa  12936400                                                                                    <---------ANAC46                                                                                    =================                                                                                    <---------ANAC58                                                                                    --------->TGA1a                                                                               --------->ANAC46                                                                           <---------MYB52(1)                                                                         --------->DEAR3(1)                                                                    --------->ARR14(1)                                                                    <------ZmHOX2a(2)                                                                    --------->CCA1(2)<-------MYC3                                                                   --------->ARR11(3)------->MYC3                                                                   <---------GLK1(2)--------->ATERF1(1)                                                     ------>NtERF2 --------->AGP1  ------>NtERF2                                                    --------->DEAR3(1) --------->LBD16                                                  <---------At5g28300------>ZmHOX2a(2)          <----                                                --------->ZAT14    <---------ARR11(3)------->PIF5                                                <---------ZAT14    <---------ARR14(2)<-------PIF5                             --------->HSFB2a(1)--------->WRKY12  --------->At4g35610------->MYC2                             <---------HSFB2a(1)--------->WRKY38(1)--------->ARR14(2)<-------MYC2                        --------->ANAC46       <-----------HVH21  --------->GLK1(1)<------NtERF2<----                       <---------TOE1(3)       <---------MYB52(1) <---------GLK1(1)--------->LBD16                       <---------TOE2(3)   =================================HOX2a_HOX2a      <-------                      <---------DOF5.7(2)  ================================HOX2a_HOX2a     --------->ATHB12             <---------MYB52(1)    ------>ZmHOX2a(1)--------->DREB2C(2)------>NtERF2<---------ANAC58  ------>NtERF2     --------->DOF5.7(2)    ------>ZmHOX2a(1)     ----------->ARR10--------->DEAR3(1)   tctccgactcaatccgtttctcgttaacgaaacattcctctactcctccgttcaccgccttcactagcagatccgccgttctcgccgcgtgcctgattgc  12936500                                                                                                    <          ------>ZmHOX2a(2)                                                                         -     --------->HSFB2a(2)                                                                            <     <---------HSFB2a(2)                                                                            < <----------DOF2                                                               <---------At4g35610 -- ===========bZIP_DOF                                                           --------->At4g35610<-- -----ANAC58                                   <----------DOF2                 --------->ZAT2   <---- -----ANAC58                            ------->TEIL                   --------->YAB1<------ZmHOX2a(1) --WOX13(1)          ----------------->AGL1    <---------DAG2 --------->AHL20(2)   <---------TOE2(3)-   ttcctttctcgatctctctgttttccattttgtgtctctgtgaatctcactttttcattctcgattatttgaatcagaattagctgaggaatgggtcgat  12936600                    --------->ZAT2                    <---------ZAT2                    --------->At4g35610                    <---------At4g35610       <---------MYB52(1)     <------------MYB.PH3(1)   ------->TEIL--------->HSFB2a(2)   --------->MYB52(1)      --------->ICU4 <---------SPL7<---------LBD16 ---------ANAC58 --------->LBD16 -------->ANAC46--------->ANAC46 ---------ANAC55(2)--------->ARR14(2) ---------ANAC58--------->LBD16                                                                    <- ------------->AtSPL3 <----------DOF2         <---------------------WRI1                        <---- ---------GT1  <---------HSFB2a(2)------>ZmHOX2a(2)  --------->At4g35610                        ----- ------DOF2   <---------LBD16 <---------YAB1  <------NtERF2                                  <------- -------->ANAC55(2)<---------ARR14(2)       <---------ANAC46             --------->LBD16   <---------At4g35610   ttacgtaccggttttttcccggagctgtaacgatgatcgacgattgtcgtcgattagctgtaagagactcgattccagagtttcagactcttcttctgat  12936700                                       ------>NtERF2                                      --------->DEAR3(1)                                    ------>NtERF2                                    <---------ATERF1(1)                                    --------->ABI4(1)                                   --------->RAP2.3(2)                                   --------->RAP2.3(3)                                   --------->ATERF1(2)                                   --------->RRTF1(2)                                   <---------ATERF1(2)                                   <---------DEAR3(1)                                   --------->RRTF1(3)                                  --------->DEAR3(2)                                  --------->ATERF1(1)                                  <------NtERF2                                  --------->RAP2.6(1)                                  --------->RRTF1(1)                                  --------->ERF1                                  --------->DEAR4(2)                                  --------->RAP2.3(1)                                  --------->ORA47(2)                                 ------>NtERF2                                 <---------ATERF1(1)                                --------->ANAC46                               ------->MYC2                               <-------MYC3                               ------->PIF5                               <-------MYC2                               <-------PIF5                                                 ---------                               ------->MYC3                                            --------->DOF5.7(2)                              --------->ANAC58                                        <------MYB83            ---------->DOF2   --------->TGA1a                                         <------MYB46(1)            ============================bZIP_DOF                                     --------->MYB46(2)        <---------------AGL15 --------->ANAC46          --------->ARR14(2)           --------->MYB59        --------------->AGL15 <---------ALFIN1          <---------ARR14(2)       <---------MYB46(3)   ------>ZmHOX2a(1)   --------->SPL7<------NtERF2<---------DEAR3(1)            <---------------AtSPL3 ----------GT1       <---------SPL7--------->DEAR3(1)<---------ANAC46     --------->At5g28300 -----GLK1(1)      <---------------AtSPL3      --------->bZIP60(1)       ----------->GT1   --------->ICU4 ---->GLK1(1) --------->DAG2<---------ALFIN1----------->HVH21            --------->LBD16 <---------DOF5.7(2) --YAB1<-----------------AGL3 --------->ANAC58 <---------bZIP60(1)      <---------DEAR3(1) <---------YAB1   ttctccttctctaaaaaaggtagcatacggccacgcgccgccgagagtgacatcggcgtattcattctctctcgccggtgaattggttcggtaacgattg  12936800                                  <-----------GT1                                <---------MYB52(1)                                 --------->ANAC58                           --------->ARR14(2)                                      --------->ANAC55(2)                        <---------ANAC55(2)                                        <---------ANAC55(2)                        <---------ANAC55(1)                                    <-----------TGA1                        --------->ANAC55(2)                                   --------->O2                        <---------ANAC58                      <---------MYB52(1)   --------->ANAC58                       <------NtERF2                        <---------ANAC46  --------->ANAC46                   <---------ANAC58                      --------->ANAC46     --------->ANAC58                   <---------ANAC58              --------->ZAT18              --------->bZIP60(2)              *TSS <---------ANAC46              <---------ZAT18              --------->ANAC58           ------>NtERF2<---------ANAC46<---------ARR14(2) <------NtERF2 --------->ANAC46 <---------ANAC58          --------->LBD16  <---------ARR14(2)<-----------RAV1(1) <---------YAB1<-----------HVH21 >ATHB12 --------->LBD16<---------ANAC58--------->ARR14(2)------>NtERF2  --------->AtLEC2 <---------ANAC58   aattagttatccccgactatttcgtggcgtatcagttaaccatatacttgttgcactacgcgccgttttgattccatgaaacgtcacgcatttcgtctta  12936900                                         --------->TOE2(3)                                        --------->ANAC55(2)             <----------DOF2            <---------ANAC55(2)             --------->TOE2(3) --------->AHL20(2)             <---------AHL20(2)           <---------YAB1  <---------AHL20(2)                <---------AHL20(2)          <---------ARR11(3)   <---------AHL20(2)            --------->AHL20(2)          --------->ARR11(3)  <---------AHL20(2)          --------->ATHB12             <-------------         --------->YAB1    --------->AHL20(2)         --------->ATHB12                <xxxxxxxxxxxxxx      <---------ICU4    <---------ICU4  --------->ANAC46<---------WOX13(1) <---------At5g28300     --------->ICU4  --------->YAB1   <-----------GT1<-------TEIL      <---------MYB46(3)   aatactactaattatctttaaaatcatatttatttattttttacgtcaaaacaaattcattgattaaatagagttgttacagtgatgtttttgaagccaa  12937000          --------->HSFB2a(2)          >>>>>>>ZML2                                                                          <-----          <---------HSFB2a(2)                 <<<<<<<<<CBP60g             <---------ZAT18     -------          <---------HSFC1(1)                  <<<<<<<<<SARD1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          --------->HSFC1(1)                 ------>MYB83            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <------ZmHOX2a(1)                           ------>MYB46(1)        --------->TOE2(3)         <------ --------WRI1         --------->YAB1       <---------MYB59   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxsmallRNA(i)  --------->YAB1             ------->GAMYB <---------ATHB12<-----------GT1   ------->TEIL   ctaggaagagttctagaatcagaataaaaacaagatgaattacaaccaaatttcgccaaatcatgtgttatcttattgccctccctcttgatgaatttaa  12937100                                                         --------->ANAC58                                                         --------->ANAC58                                                     <---------DOF5.7(2)                                                     --------->MYB52(1)                                                   --------->DOF5.7(2)                    ------>NtERF2               <-------TEIL                 <---------At4g35610           --------->ARR14(1)        --------->ANAC55(2)                   <---------GLK1(2)      <-----------GT1                         --------->ARR14(2)               <-----------GT1 ----AHL20(2)    --------->At4g35610          <---------ARR14(2)        ----------->GT1 -->AHL20(2)    <-----------RAV1(1)           --------->ARR11(1)        <---------ZAT6 ---AHL20(2)    <-----------GT1             ----------->ARR10      <---------ANAC46                --   attgaatgttactgaattttgctgcccaaaactgaatatttgtgagtagattcgctaacgagcaatgtgaagtagagttattaactagttgtatcaaagt  12937200                                                            --------->ATHB51                                                            --------->YAB1                                                            <--------ATHB1                                                            -------->HAHB4                                                            <---------ICU4     --------->YAB1           <---------AHL20(2)           <---------ATHB51     --------->TOE2(3)    ----------->GT1                  --------->ICU4     --------->TOE1(3) ---------->DOF2                     <---------AHL20(2)     <---------ZAT18   --------->GLK1(2)<---------AHL20(2)      <---------ZAT6 <---------YAB1   ------->TEIL ------->YAB1 --------->YAB1 --------->AHL20(2)          --------->YAB1<---------ANAC46   ttgataatcttaaaaatcatattttaaaagataaaattgttgtttagagttaagaagattaataattgttgtttcatgtatttgtgcaattagatgtgtt  12937300  Previous    Next  AGI:  At2g30330.1    Description:  GCN5L1 family protein. Identical to GCN5-like protein 1 [Arabidopsis Thaliana] (GB:O22929); similar to unnamed protein product [Vitis vinifera] (GB:CAO21335.1); contains InterPro domain GCN5-like 1 (InterPro:IPR009395) Range:  from: 12935844    to: 12936814    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version