Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ----------->GT1        --------->DAG2       ---------->DOF2              --------->ICU4    --------->YAB1                  <---------YAB1<---------AHL20(2)   <---------ATHB12      --------->ZAT18          --------->AHL20(2)                        <--------   <<<<<<<<<ARR2         <---------ZAT18 --------->YAB1                                 >>>>>>>>>SARD1 --------->WOX13(1)      <---------ZAT14 <---------ICU4                  ----------------->AGL1     < --------ATHB12       <---------ANAC46  --------->ICU4           --------->YAB1         >>>>>>>>>CBP60g   aaacaatcaaaaagtataaacatcgtgtggactatgtaatgaataatgagatttaaacaagtagcgatgagaattgccaaaatcgatgaaatttgggacg  12915900                <---------TGA1a                                                    --------->LBD16                <---------O2                                                      <---------ANAC58           --------->REM1(2)                                                      <---------ANAC46          --------->ALFIN1                                                        <---------ANAC58        <---------ANAC55(1)                                                      <---------LBD16        <---------ANAC55(2)                                                   --------->CCA1(2)        <---------ANAC46                      <------ZmHOX2a(1)               <---------GLK1(1)        <---------bZIP60(2)               --------->LBD16                    --------->ARR11(3)        <---------O2                 --------->GLK1(1)                       <---------ARR11(3)        <---------ANAC58             <---------GLK1(1)                       <---------ARR14(2)    <---------ANAC58                <---------ARR14(2)                       --------->ARR14(2)    <---------ANAC58                --------->ARR14(2)                     ----------->ARR10       -- --ID1  <---------ANAC58           <------ZmHOX2a(1)                  <------ZmHOX2a(1)<------ZmHOX2a(1) ------ZmHOX2a(1)    --------->CCA1(2)  <---------LBD16     --------->GLK1(1)--------->ARR11(1)    <-   aaggaggcttacgtggagacgagagatggagaagagaggaactccggaggaatcaaggagagatttcaaggaggaagaagatttgcggaggatgaagacg  12916000                                                                                              <------                                                                                             ------>ZmHOX2a(1)                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR14(2)                                                                                         <---------ARR14(3)                                 <------NtERF2                                           --------->ARR14(3)                           ================HOX2a_HOX2a                                   --------->ARR14(2)                          <---------ARR11(3)--------->LBD16                              <---------ARR11(3)                          --------->ARR14(2)<---------HSFB2a(2)                          --------->ARR11(3)                       --------->LBD16     <---------LBD16                              <---------GLK1(1)                   --------->ARR14(2)     <---------LBD16                               --------->GLK1(1)                   --------->GLK1(2)   <---------HSFB2a(1)                             ----------->ARR10           --------->GLK1(2)    --------->LBD16    <----------DOF2                   --------->LBD16           --------->ARR14(2)  --------->DEAR3(1)  <---------DAG2                   --------->DEAR3(1)           <---------ARR14(2) <---------LBD16    --------->HSFC1(2)                 <---------ANAC46          <---------ARR14(2)------>ZmHOX2a(2)    <---------HSFC1(2)                <---------LBD16  <         <---------HSFB2a(1)===============HOX2a_HOX2a                           --------->ANAC46   -         <---------HSFC1(2)<------ZmHOX2a(2)--------->HSFB2a(2)      <------ZmHOX2a(2)<------NtERF2 <   <---------LBD16 <---------ARR14(2)  --------->HSFB2a(1)           ===============================HOX2a_HOX2a ------->ARR11(3) --------->GLK1(1)  ---------->DOF2   --------->HSFB2a(2)    <---------ARR14(2)   -- --------ARR11(3) <---------GLK1(1) <------ZmHOX2a(1)  <---------HSFB2a(2)    --------->ARR14(2)  <--   agatgttcggaagaatcggcaaatccgagatcgccggaggaaagtccgggaagctttttggaagcgaagagatcgactggtatacgccggagatcctcag  12916100          --------->ANAC55(2)         <---------LBD16        --------->CCA1(2)     ----------->HVH21     ----------->ARR10  <------NtERF2 -----RAV1(2)<---------GLK1(2)                         --------->At4g35610 ---------DEAR3(1)                                     <---------At4g35610                          - -------->ETT(1)                                   <-----------HVH21                                - ---------ANAC46                               --------->YAB1           >>>>>>>>>TBF1               - ------->ALFIN1                             --------->YAB1    --------->SPL7            <---------At4g35610 ---------HVH21  <---------LBD16--------->AHL20(2)------->GAMYB--------->DAG2           --------->At4g35610   ggtcggggtgatacggagtctcggaatcagccatttacatagtctctaataacagtcagaagcgtaaggtagaagaagaacaagagaagcagcttatatt  12916200                                                     ------>NtERF2                                      <---------GLK1(2)                                  <------ZmHOX2a(2)  <------NtERF2                                 <---------ARR14(2) --------->LBD16                              --------->ETT(1)      <---------RAP2.3(1)                            <-----------HVH21      <---------DEAR3(1)                          <-----                           --------->bZIP60(1)     <---------RAP2.3(2)                 <---------At4g35610                           <---------bZIP60(1)     <---------RAP2.6(2)          <---------ATHB51                         --------->YAB1            <---------RRTF1(2)           --------->AHL20(2)      <---------ATHB12   <---------ICU4<---------RVE1(1)                        <---------AHL20(2) ------->GAMYB          <---------ATHB12          <---------LBD16             --------->YAB1   ------ -------->ANAC46        --------->ICU4--------->ARR11(3)                    --------->AHL20(2)------- -------->ANAC58       <---------TOE2(3) <---------AHL20(2)             --------->ANAC46      <------ -------->ANAC58  ---------->ID1 --------->ARR14(2)<---------ANAC46   --------->REM1(1)--------->At4g35610   caacgccaatgtttttttttgttctaatgatgtcggatcagatttttttttttgcggcgaaacattcttcttacaccaaaaaataattcagatgaataaa  12916300            --------->ATHB12            <---------ICU4            --------->ATHB51           <---------ATHB51                      --------->YAB1           <---------AHL20(2)                    -------->HAHB4           --------->AHL20(2)         --------->AHL20(2)       --------->AHL20(2)             --------->AHL20(1)     ----------->GT1                  <---------AHL20(2)     --------->ANAC58                 <---------AHL20(1)     --------->ANAC58            --------->ARR11(3) --------->ANAC58                <---------ARR11(3)<---------YAB1 --------->ANAC58        --------->ANAC58       <---------YAB1  <---------ANAC58 ----AHL20(2)            --------->ANAC58       --------->ICU4  <---------ANAC58 --->AHL20(2)      <---------REM1(1)  *TSS --------->YAB1  <----------DOF2 -->AHL20(2)<--------ATHB1      --------->YAB1  ----------->GT1<---------TOE2(3) ---AHL20(2)-------->HAHB4   ---------->DOF2  --------->YAB1  <-----------GT1------------>CBF      --   attaagcaagtaaataattggatgtagaagccaaagataataaaatagtaatgataattttcttttacgttcttgagataccaattcttgtttttttttt  12916400                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                       <---------AHL20(1)                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                  <---------WOX13(1)                                                               <---------YAB1            ------------------------>ANAC81                  ------>ZmHOX2a(2)            --------->AtLEC2                               --------->ARR11(3)            ----------->GT1           <-----------GT1      <---------ARR11(3)                      <-    --------->MYB52(1)          ----------->GT1      <---------YAB1 --------->YAB1     --------->At5g28300 --------->ANAC46              --------->DAG2       <---------TOE2(3)  --------->AHL20(1)          <- ------->ANAC46               ---------->DOF2 <---------AHL20(2)--------->ATHB12      ----------->GT1   cacacaaaactgaaatgcaaaaaaaaaaactaaaaagtaataacacatttttttgatgtttgatcttgattaataaattaatagaaaatggtaaatgtgt  12916500            <------MYB46(1)            <------MYB83                              <-------TEIL            ----------->GT1                          --------->CCA1(2)          <--------P                      <-------GAMYB        <------MYB46(1)                  --------->MYB55(2)        <------MYB83                     <---------MYB46(3)                 ----------->HVH21   <----       --------->MYB59                   --------->MYB52(2)               <----------DOF2     ------- --------ANAC58               >>>>>>>>>MYB98    ---------->DOF2      --------->KAN4(2)   <---------WOX13(1) --------ANAC58         ----------->GT1  --------->MYB111(2)     <---------ZAT18       --------->ATHB12   tacttacattaggttggaaaaacgtatggtttaacatatgtgtttgttggaaaagatacatttttagtgaacatacctttgacatgaattgatttataaa  12916600                                                         <---------YAB1                                                         <---------ANAC46                <---------AHL20(2)           <---------AtLEC2                              <---------ANAC55(2)        <---------AHL20(2) -----TOE2(3)                                       <---------ICU4             --------->ICU4 --->DOF2<-----------GT1                          <---------TOE2(3)  --------->YAB1 --------->AHL20(2)   ggtttttttttttgcatttccatccctctcaaatgtttgttttaaaaaaactaagaattatgtataatctttcaaaatgtattgattttatttttttttt  12916700                           ------>ZmHOX2a(2)                         <-----------ARR10                         <---------ARR11(3)                         --------->ARR11(3)                       <---------YAB1                     --------->YAB1                                                          --------                <---------AHL20(2)                                                        --------->DAG2              --------->AHL20(2)                                                   <---------ANAC58             --------->ARR11(3)                           ------->TEIL             <---------ANAC46             <---------ARR11(3)                         <-------TEIL               <---------ANAC58             <---------AHL20(1)                        --------->AtLEC2<-----------GT1   ---------->DOF2   atgttttctgtagaatatatatatgatgatctactctgttcaaaacatcacccttacatgcatttcagtgatttcacctctaatttcgtttaaaagtgga  12916800  Previous    Next  AGI:  At2g30270.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01750.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21348.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) Range:  from: 12914918    to: 12916338    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g30280.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO21344.1) Range:  from: 12916670    to: 12919417    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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