Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(1)                              --------->ARR11(3)                              --------->AHL20(2)                              <---------AHL20(2)                              <---------ARR11(3)                                               ------                              --------->AHL20(1)                                      <---------REM1(1)                            ------->TEIL                                           <-----------RAV1(1)                         <---------YAB1                                       --------->AHL20(2)                       <---------ICU4                                         <---------AHL20(2)                       -------->HAHB4                                     <---------CCA1(1)   <------                       --------->YAB1                                     <---------RVE1(1) ---------                 ----------->GT1                           <----------ID1<---------AHL20(1)<---------ZAT6 -------->AHL20(2)    <---------ATHB51       <---------------------WRI1  --------->ARR11(3)<---------YAB1 ---------AHL20(2)    --------->ICU4     ---------->DOF2---------->DOF2  <---------ARR11(3)--------->ICU4   atttaaaaatcgagggattgggtaattatgaatatattgattttaaagtcgattttttaaaagaacaaaatccaagatatttattttgttgtagtgattg  12884500                                               -------->P                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         --------->YAB1                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->AHL20(2)                 --------->AtLEC2           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)         <---------AHL20(2)   <-----------GT1                         <-----------GT1                            --------->YAB1  --------->AHL20(2)           <---------AHL20(2)                                    --------->AHL20(2) ----->GT1       --------->ANAC58  <---------AHL20(2)       <---------REM1(1)        <---------AHL20(2) ---WOX13(1)     --------->ANAC58--------->ANAC55(2)     <-----------RAV1(1)        <---------ATHB12- >ATHB12    -------->P    <-------TEIL     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->AHL20(2)   ttaatttactaaactacccatgcaaaaattcatttacttaattttaaactacccttacaatgttgtagttcatacaatacttctcaattaataatataga  12884600                                                                                          --------->YAB1                                                                                          --------->AHL20(2)                              <-----------GT1                                           --------->AHL20(1)                           <---------AHL20(2)                                          --------->YAB1                          <---------AHL20(2)   --------->AHL20(2)                    --------->AHL20(2)                          --------->AHL20(2)   <---------AHL20(2)         <---------TOE2(3)   --------->ICU4  ----------->GT1      <---------ZAT18                  <-----------GT1--------->AHL20(2) -------->ZAT6    ----------->GT1      <---------ANAC46                 XXXXXXXXXXXXXXXXXXXX>MIR3932A/B   taacacttattagttttcaagggataaatttttttccacttgtgtacatttaaattctaccaaagttttaaaaatttacgatgacaaaaaaataatattc  12884700                                                             --------->TOE1(2)                                             <---------CCA1(2)       <---------AHL20(2)        <-----                                          <-------TEIL     <---------TOE2(3)               ----------                                       <------MYB46(1)     --------------->AtSPL3          <---------                                       <------MYB83<----------DOF2   --------->AHL20(2)    --------->DAG2                                      --------->MYB111(1)  <---------------AtSPL8          ----------                                      --------->MYB52(2)   --------------->AtSPL8          <---------                                      --------->MYB59      <---------------AtSPL3         ---------->DOF2             --------->YAB1           --------->MYB46(2)  ---------->DOF2           ----------->GT1     --------->AHL20(2)             <---------MYB52(1)   --------->AHL20(2)        --------->DAG2  --------->YAB1 --------->GLK1(2)<---------MYB46(3)     <---------AHL20(2)       ---------->DOF2   gtattcataatataaacataatctaataagtttttttggttaggttcatatcgcttaaattaaagtacgatttaaaaaaaaaaaaaaagtaaaaaagtac  12884800                                                                <---------LBD16                                                             <---------ANAC58                                                    <---------AHL20(1)                                                    <---------ARR11(3)                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                                    --------->ARR11(3)                                                   --------->AHL20(2)                                          ----------->GT1    <---------ANAC58                                   --------->TOE2(3)--------->AHL20(1)                   --------->ANAC58 --TEIL ----------->GT1           ----------->GT1--------->AHL20(2)                 --------->ZAT18 ----->AtSPL3                     <---------ANAC55(2)<---------AHL20(2)        ---------->DOF2     <- ------AtSPL3             ----------->GT1--------->DAG2    <-----------GT1--------->ARR11(3)  ------- ----->AtSPL8        ---------->DOF2   ---------->DOF2 <---------AHL20(2) <---------ARR11(3)  ------- ------AtSPL8    --------->ZAT6  <-----------------------TaNAC69(2)   ---------->DOF2    --------->ANAC58   gtttttgttttggtaaaaaacactaaagaggcaaaaacgtaaaaaggcaaaaaatatatttttacttggggaaaaagatgttaaagcccacaagacaagg  12884900                                          ------>ZmHOX2a(1)                                      <---------ARR14(2)                                      --------->ARR14(2)                                     <---------ALFIN1                                    ------>NtERF2                                    <------NtERF2                                   --------->RRTF1(2)                    <------MYB83                                   --------->RAP2.6(2)               <---------GLK1(2)                                   --------->RAP2.3(2)            --------------->AGL15                                   --------->DEAR3(1)            <-----------------AG                                  --------->RAP2.3(1)            ----------------->AGL2                                --------->ANAC46                 <-----------------AGL1            --                                ------->GAMYB                    ----------------->AGL1         -----                                --------->DEAR3(1)          <---------GLK1(1)                --------   <---------ARR14(2)          --------->DEAR3(2)           --------->GLK1(1)    <-----------GT1<----   --------->ARR14(2)          --------->MYB46(3)     <---------DEAR3(1) <------MYB46(1)    --------- -----NtERF2                 <-----------GT1          --------->ETT(1)  --------->MYB59     <-------- -->ANAC58     <----------DOF2<---------At5g28300   <-----------HVH21--------->ARR14(2)     <-------- -->ANAC58     *TSS  <----------DOF2<---------ATERF1(1) <------NtERF2<---------ARR14(2)<---------ATHB12   cagaggtttctcccatgctttgtctttagtttaaccgccgcatcctctctctctggtcggagaaatctccagatttggtcatttctccaatcttctcgga  12885000          --------->AtMYB61 ------->TOE2(3)                                                                                    - ---->ARR14(2)                                                                                      - ->ANAC46 <---------MYB59         <---------At4g35610                                               - -----ARR14(2)       ------>ZmHOX2a(1)  ------>ZmHOX2a(1)                                        ---- >HSFB2a(2) ------>MYB46(1)    <-------TEIL                                          <<<<<<<<<<<<<<<< -LBD16<-----------GT1       <---------GLK1(2)        ---------->DOF2       <---------ATHB12   ------ -HSFB2a(2) ------>MYB83------>ZmHOX2a(1)  ------>ZmHOX2a(1)              --------->WOX13(1)  -------   accctaatttaaccaaacctctcctccttcagattcatcttcctcctaatctccctaaaagctcaaacctttctctcaatcaattctaaacaatggcaac  12885100                     --------->ARR14(2)                     <---------ARR14(2)            --------->ARR14(2)           ------>MYB46(1)         ------->GAMYB         <---------MYB59                              --------->GLK1(1)       --------->ANAC58                              --------->ARR14(2)       --------->ANAC58                              <---------ARR14(2)      ------->GAMYB  --------->GLK1(2)               <---------GLK1(2)     <---------MYB111(1)    ------>ZmHOX2a(2)      --------->LBD16     <---------MYB55(2)    <------ZmHOX2a(2)    --------->MYB52(1)     --------->MYB46(3)    --------->GLK1(1)   ------->GAMYB                   --------->ZAT2     <---------MYB52(2)    <---------GLK1(1)   <---------ALFIN1                <---------At4g35610 -------->ANAC46    <---------GLK1(2)          --------->AtMYB61     <---------ICU4 -------->ANAC58  --------->LBD16             <---------MYB55(2)     --------->YAB1 -------->ANAC58 <---------HSFB2a(2)       --------->MYB46(3)  --------->ANAC58--------->At4g35610 --->GAMYB ------>MYB83   <---------ARR14(2)  --------->MYB46(3)    --------->ICU4 <LFY<---------MYB111(2)  --------->ARR14(2)  <---------MYB52(2)    <---------ATHB12 --->At4g35610   --------->HSFB2a(2)     --------->ANAC46      --------->ANAC58<---------ZAT2       - ---->RAV1(1)   <---------LBD16 <-----------HVH21<---------LBD16  --------->WOX13(1)   --------->ANAC46   agaagcaacaaccaaattcccagaatccgatctccgtccaatcccacaaccaccggattttcatccagcaatcatcgttccagctcaaaacacaactctt  12885200                     <---------DEAR3(2)                     <---------MYB46(3)                    <---------DEAR3(1)                    <---------TOE1(2)                   --------->ATERF1(1)                   <------NtERF2                                       ----------->GT1                   <---------LBD16                                   <-------TEIL          <---------ARR11(3)                 --------->ETT(2)                                   --------->CCA1(2)      --------->ARR11(3)               <-----------HVH21                                   <---------ARR14(2)    --------->ANAC58           --------->MYB52(1)                   <-------MYC3       --------->ARR14(2)    --------->ANAC58         <---------MYB52(2)      ------>NtERF2  ------->MYC3 <---------HSFB2a(2)    <-------MYC3 -------->GLK1(2)<---------DEAR3(1)  <-----------RAV1(2)     --------->HSFB2a(2)    ------->MYC3   aaattctggcaactaatggtcgccggttcaatcgctggctcagtcgaacacatggctatgtttccagtagatacagtcaaaacccatatgcaagctcttc  12885300                            <---------MYB52(1)                            --------->WRKY18(1)                       <---------ARR14(2)                       --------->GLK1(2)        <---------YAB1                       --------->ARR14(2)     --------->YAB1                   --------->YAB1            <---------ATHB12         <---------------AGL15                 --------->MYB52(1)   <---------ANAC58                <----------DOF2                 ------>MYB46(1)      <---------ANAC58                --------------->AGL15                 ------>MYB83     <----------DOF2--------->YAB1       <---------DAG2            <-----------GT1<-----------HVH21 --------->ICU4  ------->TEIL      <---------TOE2(3)    -   gttcatgtccgattaaaccaatcggaatccgtcaagctttccgttcaattatcaaaaccgatggaccttctgctttatatagaggtatttgggctatggg  12885400  Previous    Next  AGI:  At2g30160.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G07030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21380.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 12884915    to: 12886726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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