Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->ANAC55(2)                  --------->ANAC46                  <---------ANAC55(2)              ------>MYB83              <-----------HVH21 --------->ABI4(2)          ------>MYB46(1)       <---------ZAT18          ------>MYB83          <---------At4g35610          -------->P            --------->At4g35610         ------>NtERF2      <---------DEAR3(1)        --------->DEAR3(1) <---------LBD16      ------>NtERF2    <----------DOF2     --------->ANAC58  <---------DAG2     --------->RAP2.6(2)<----------DOF2     --------->ANAC58 <------NtERF2     --------->ANAC46------>NtERF2    --------->SPL7--------->ANAC58  <---------SPL7  --------->ANAC58                                                                 <-  ----------->HVH21 --------->ANAC46                       ------>ZmHOX2a(1)                      --- ---------At4g35610 --------->ANAC58        <---------ARR11(3)                        <---------YAB1 -------->At4g35610 --------->ANAC58       --------->REM1(1) >>>>>>>>>MYB98 --------->ANAC46      --- ----->TEIL   ------>MYB46(1)   --------->ZAT14    <<<<<<<<<TBF1         <---------ZAT18          ---   gcatcggacgccaacctatcacgcgcctttgcggtgctcacttctacatcttcttcttctcctaacttactatattgccctcaacattctcatggtcaaa  12875300                                                                              <---------ZAT18                                                                              <---------ZAT14                                                                       <---------ARR14(2)                                                                   ------>ZmHOX2a(2)                                                                   <-------TEIL                                      <---------ARR14(2)          <------ZmHOX2a(2)                                     <---------CCA1(2)           --------->ARR14(2)                                     <---------GLK1(1)           <---------ARR14(2)                                  <-------TEIL                <---------TOE2(3)                              --------------->AtSPL8   --------------->AGL15  --------->ZAT14         ------>MYB46(1) <---------MYB52(1)           ----------------->AGL3--------->ANAC46         ------>MYB83   --------->At5g28300    ===========================HOX2a_HOX2a ----------TGA1         <---------RAP2.6(3)    ------>ZmHOX2a(1)<------ZmHOX2a(1) <----------DOF2 ------>ANAC46         ----------->GT1--------->ARR14(2)      <---------TOE1(3) ------->TEIL   <----- ------>ANAC58     <-----------GT1------->TEIL ==========================HOX2a_HOX2a          <------ ------>ANAC58<----------DOF2 <---------------AtSPL8--------->GLK1(2)  --------->ARR14(2)     -------   acgtcattaccaacgtcttttttagccgttaatatgtacatatcccgtcctaagaatccaaattaaggatccatatacactgtacttttgaactatttaa  12875400                                                                           <---------AHL20(2)                                                                        --------->AHL20(1)                                                                       <---------ICU4                                                                       --------->ATHB51                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)                                                                      --------->ICU4                                                                ----------->GT1                                                                <---------YAB1                                                              --------->YAB1                                                   <---------AHL20(2) <---------YAB1         <-------TEIL                            <---------RVE1(1)  <---------ICU4        --------->CCA1(2)                        <---------CCA1(1)  --------->YAB1 ----AHL20(2)                                   --------->ARR11(3) <---------YAB1 ---AHL20(2)                                    <---------ARR11(3) --------->ICU4   ---------->DOF2 -->AHL20(2)            --------->TOE2(3)       <---------GLK1(2)--------->YAB1  <----------ID1 <----   attgcataagattcaaacaagacttaacttaaaatgacatctattttgaagatttttttttctaaaatgataattattttataacgaaaagaatacaact  12875500                                                                                          --------->ANAC58                                                         --------->AHL20(2)        --------->YAB1                                                         <---------AHL20(2)     --------->YAB1  <----                                                      --------->YAB1           --------->AHL20(2)                                              ----------->GT1      <---------TOE2(3)      --------->ANAC58                                             <---------TOE2(3)     <---------TOE1(3)      --------->ANAC46                        <---------TOE2(3)    <---------TOE1(3)    ---------->DOF2 <---------YAB1-----              --------->ANAC58               --------->MYB59     <---------AHL20(2)<---------ICU4   < ------DOF2   --------->ANAC58        --------->YAB1 <---------AHL20(2)        <---------AHL20(2)   -   ttgtggtgagaagaacaagaaaaactaagaataggtgttttcatatttaggttaaataataaaacatttaaagttaagacattaattataacacacaaaa  12875600                                                <---------HSFB2a(2)                                                --------->HSFB2a(2)                                   ------>MYB46(1)             <---------AHL20(2)   --------->MYB55(1)            <---------AHL20(2)   --------->DEAR3(1)            --------->AHL20(2)   --------->AtMYB61  <---------TOE2(3)              <---------MYB46(2)                             <---------ALFIN1 ---------->DOF2                 <---------MYB111(2)                            --------->ANAC46 -----AHL20(2)                   --------->MYB46(3)---------->DOF2      ----------->TBP ---->AHL20(2)                   <---------MYB111(1)                    <---------YAB1 ---------AHL20(2)     ------->MYC3-------->P   --------->HSFC1(1)    --------->YAB1 -------->AHL20(2)     <-------MYC3------>MYB83 <---------HSFC1(1)   <---------YAB1                 <   aattaaagttggaattaaatgaacacatgtgaacaccaacctcgctctctctagaaagccttcaaaaccctattataaatacacacctctcaaactctct  12875700                                <---------At4g35610              <---------AHL20(2)                                --------->ZAT14             ------>ZmHOX2a(1)       *TSS       <----------DOF2     ---------->DOF2       --------->ICU4                          <     --------->ZAT6      <----------DOF2                    <---------YAB1 --------->YAB1       ----- ----------DOF2<-----------GT1  --------->At4g35610        --------->TOE2(3)            ----------->GT1   ccctttaactctaagtttttctttcttctttctctgctctcaaagctcaagagaactctatccttattaacttacaaggataactaaaaccggtgtaatc  12875800                             --------->YAB1                            <------ZmHOX2a(2)                           <---------ARR14(2)                           <-----------ARR10                           --------->ARR14(2)                         --------->LBD16                        --------->LBD16                       <---------LBD16                     --------->ARR14(2)                     --------->PCF5                     --------->TCP16(1)                     <---------ARR14(2)                    <---------SPL7          <---------ANAC58                    --------->ATERF1(1)     <---------ANAC58   <---------------------WRI1  --------->YAB1    <-----------HVH21       <---------ANAC46  ------>NtERF2                 <-------- <------ZmHOX2a(2) <---------ATERF1(1)------->MYC2           --------->DEAR3(1)           ------->TEIL <---------YAB1    <---------DEAR3(2) <-------MYC2 --------->HSFC1(2)                    <---------ALFIN1 ---------ARR11(3) <---------MYB46(3) ------->MYC3 <---------HSFC1(2)                 --------------- ---->YAB1        <---------DEAR3(1)  <-------MYC3 <---------At4g35610            ------->TEIL    <--   acgatcatagtagaagatgggcggtcccggatcatcaccatgtgcttcgtgtaagcttcttcgacgacgatgtgcaaaagattgcatcttcgcaccttat  12875900                                                          --------->TGA2(2)                                                        --------->bZIP60(2)                                                        --------->ANAC58                                                        <---------O2                                                        --------->O2                                                        --------->TGA1a                                                        --------->ANAC58                                                    <------NtERF2                                                    <---------ZAT2                                                    --------->ZAT2                    --------->ARR14(2)             ------>NtERF2                    <---------GLK1(2)              --------->ANAC58           <------ZmHOX2a(2)                       --------->ANAC46          --------->ARR14(2)                      --------->ATERF1(2)          <---------ARR11(3)                      <---------ATERF1(2)     ----------->HVH21                           <------NtERF2          <-----------RAV1(2)     =============HOX2a_HOX2a                   ------>NtERF2      <-----------RAV1(1)     ------>ZmHOX2a(1)  >>>>>>>>>>>>>>>>>LFY <---------ANAC58<---------At4g35610   ----------->RAV1(2) --------->ANAC46      <---------ANAC58--------->At4g35610  ================HOX2a_HOX2a             <----------DOF2<-----------HVH21  ------>ZmHOX2a(1) <---------ARR14(2)    ========================bZIP_DOF -DAG2    <---------ARR14(2)           <---------ARR11(3)<-----------TGA1<---------TOE1(2)        --- >AtSPL8  --------->ARR11(3)           --------->ARR11(3)--------->TOE2(3)            ------>ZmHOX2a(1) ---------GT1 ------>ZmHOX2a(1)      --------->DAG2--------->ANAC58=================RAV          ----   tttcctcctgacgatcctcacaaattcgccattgttcataaggtctttggtgccagcaacgtcagcaaaatgttgcaggttccatctccttctcatttcc  12876000                                              <-------GAMYB                                              --------->At4g35610                   --------->ARR14(2)                                             <---------MYB46(3)                     <---------ARR14(2)                                        --------->MYB59                             <---------ARR11(1)                                   <---------RVE1(1)                                --------->ARR11(3)              <---------ARR11(3)   <---------CCA1(1)               <----------DOF2  <---------ARR11(3)              <---------AHL20(1)  <---------ARR11(3)           <-------MYC3        <---------CCA1(2) ------>ANAC46--------->ARR11(3)  --------->ARR11(3)           ------->MYC3   <-----------GT1 ------- ----->LBD16  --------->AHL20(1) --------->YAB1    <---------GLK1(1)       <---------AHL20(2) <------   ccataactatatgctatatattggtttttcttccatgatattttggtccgttgaaatcccttccatatgctttctatttttatccatatctctcttccaa  12876100                                                                                          -------->P                    <---------ANAC55(2)                                                  ------->GAMYB                    --------->ANAC55(2)                                                 --------->AtMYB61                 <<<<<<<<<<WRKY26                                                       <---------MYB111(1)                 <<<<<<<<<<WRKY43                                                       <---------MYB55(2)                 <<<<<<<<<<WRKY38                                        --------->YAB1 <---------MYB111(2)                 --------->WRKY18(1)                               --------->YAB1       <---------MYB52(2)               <------MYB46(1)                                  --------->YAB1<-----------GT1 <------ -->HSFB2a(2)  <------MYB83                                    --------->AHL20(2) --------->ANAC46 <- ---HSFB2a(2) --------->MYB59    <----------DOF2         <-------TEIL--------->AHL20(2) --------->MYB46(3)   aacattcagtgtgtgtttggtcaagtatcaaacttctttaaacatttgtatagtatacatacacattaaaaataaacatatttcactccaacaaccctta  12876200  Previous    Next  AGI:  At2g30130.1    Description:  ASL5 (phosphoenolpyruvate carboxykinase1). Identical to LOB domain-containing protein 12 (LBD12) [Arabidopsis Thaliana] (GB:Q8LBW3;GB:O64734;GB:Q549W5); similar to LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT1G31320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68873.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 12875707    to: 12876801    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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