Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->AHL20(2)                    <---------AHL20(2)                   <---------AHL20(2)                --------->AHL20(2) --->GAMYB      <---------AHL20(2) ---->MYB46(3) --------->AHL20(2)                                                     <---------TOE2(3) --->At4g35610 <---------AHL20(1)                                            --------->ANAC58 ----At4g35610 <---------AHL20(2)                                            --------->ANAC58       < --WRKY12  <---------AHL20(1)                                                --------->YAB1        <- --WRKY38(1)   --------->AHL20(1)                  --------->ZAT14           --------->ANAC46     <-- --ETT(2)  --------->AHL20(2)                      <---------ZAT14           --------->ANAC55(1)  <-- ->ETT(2) <---------AHL20(2)                       --------->ZAT18           --------->ANAC55(2)  <-- >WRKY18(1)<---------AHL20(2)                      <---------ZAT18          <---------TOE2(3)   <---- --HVH21  --------->AHL20(2)                  ---------->DOF2      <---------TOE2(3)  <---------TOE1(3)   agccactagttattaaatttatttattttttaaaaaaactcatcaaaacaaagtccactagttatattcgaggttataaacgtaattcaaggttattgtg  12854500                                                --------->ANAC46                                                --------->ANAC58                                                --------->ANAC55(1)                                                ================================bZIP_DOF                                                <---------O2                                                --------->O2                                                --------->TGA1a                                                <---------TGA1a                                                --------->ANAC55(2)                                                --------->bZIP60(2)                                                <---------ANAC55(2)                                                ================================bZIP_DOF                                                --------->ANAC58                                           --------->bZIP60(2)           ===============================================bZIP_DOF           ---------->DOF2             ------>NtERF2 <---------At4g35610        <----------DOF2               --------->ANAC46        ==================================================bZIP_DOF ---------MYB52(1)                    --------->ANAC58  --------->At4g35610 ------GAMYB                          <---------bZIP60(1) --------DOF2             <---------YAB1   ----------->HVH21                                <-------- ---------RAV1(1)       --------->YAB1--------->bZIP60(1)                        ---------->DOF2<---- -------MYB46(3)       <---------YAB1 --------->ANAC58 --------->RAP2.6(2)    >>>>>>>>>>MYB80  <----- -----At4g35610  <------NtERF2     --------->WRKY12--------->SPL7    <----------DOF2       <---------   ctgttgggagctttgaagcggcacgatgataaataagttgacgccatgacacgtaagccgcttagtagcctctttcttcaaaccaaagactattcaccgt  12854600                                                   --------->MYB46(3)                                                  <---------TOE1(2)          <------MYB46(1)                    --------->TOE1(3)             --------->SPL7             <------MYB83                    --------->YAB1               ------>ZmHOX2a(1)          --------->MYB59               ------------>CBF                 --------->TOE2(2)       --------->AHL20(2)              --------->ANAC58                  --------->TOE1(2)       --------->AHL20(1)              --------->ANAC58            --------->AHL20(2)            <---------AHL20(2)           <---------ZAT18                <---------AHL20(2)           <---------AHL20(2)         <---------At4g35610           <---------AHL20(2)           --------->AHL20(2)    <---------YAB1  --------->TOE2(3) --------->AHL20(2)           --------->AHL20(2)    <---------TOE2(3)             --------->AHL20(2)               <---------AHL20(2) -At5g28300--------->ZAT18        --------->AHL20(1)           --------->AHL20(2)             <------ -----MYB52(1)--------->ANAC46    <---------AHL20(1)           --------->AHL20(1)         <----------DOF2 --GAMYB --------->At4g35610      <---------AHL20(2)           <---------AHL20(2)   <---------MYB52(1) --GT1---------->DOF2  <-----------GT1<---------AHL20(2)----------->GT1--------->AHL20(2) ------>ZmHOX2a(1)   tggattaagaaagctcactcaatcttaacccttcattttattaaataaatcctacgaccagaaaataaaataaataatttggttctgttatcctttcatt  12854700                                        --------->TOE2(3)                        <---------AHL20(2)                        --------->AHL20(2)                                              --------->GLK1(2)                     <----------DOF2   <---------YAB1               --------->HSFB2a(2) --------->ARR11(3)               ---------->DOF2        --------->ARR11(3)            <---------HSFB2a(2) <---------ARR11(3)           --------->LBD16            <---------ARR11(3)      <------NtERF2      --------->ANAC58           ------>ZmHOX2a(1)          <-----------ARR10      <---------MYB46(3)  --------->ANAC46 ------CBF<---------ANAC46         <---------GLK1(2)        <---------RAP2.6(2)  --------->ANAC58 <--   gtcttcttcattcctggtaaaggcttttaatttcatggattatcttagcttctactctcatggtggctatcgagaaatcactcacaccaaaatctttgaa  12854800                                                <-----------GT1                                            --------->YAB1                                       ------------>CBF                                      --------->ANAC58                                      --------->ANAC58                                    --------->LBD16                              --------->HSFC1(1)                                   --------->LBD16                               <---------HSFB2a(2)                                   --------->ANAC46<---------DAG2                --------->HSFB2a(2)                                  --------->HSFB2a(2)                            --------------->AGL15                                  <---------HSFB2a(2)                    <-----------GT1 -------ARR14(2)              <----------DOF2  <-----------GT1 <----------DOF2  <---------LBD16     <   gttctgagtttcaaagtttttcgaatttgaaactttcccgaagcaattttaaaccttttctcttcctttcgattttttctcttctggaattagaaaactt  12854900                                                                    ------>NtERF2                               >>>>>>>>>WRKY6                       <---------ALFIN1                             --------->WRKY12                      --------->LBD16                             --------->WRKY45                 ------>ZmHOX2a(1)                             --------->WRKY38(1)          --------->ARR14(2)     <---------ANAC46       --------->DOF5.7(2)         --------->HSFB2a(1)            ----------->GT1     <---------ANAC58       <---------MYB52(1)      ----------->HVH21                  <---------ANAC46     <---------ANAC58      --------------------->WRI1------>NtERF2--------->LBD16 --------->AtMYB61 ---------ICU4            <---------ANAC46          --------->DEAR3(1)           --------->MYB46(3)   agttatggcttatgctcatgttttcgcttcgttgactatctcgacgatttctctccgacgattcctcccccgacttcatcgaaaccacagcgtaaaaccc  12855000                                                 <---------HSFB2a(2)     --------->ALFIN1                                                 --------->HSFB2a(2)    <---------LBD16                                      <---------HSFB2a(2)               --------->LBD16        --------->YAB1                --------->HSFB2a(2)              <---------ANAC46   --------->LBD16                  --------->At4g35610                <---------ANAC55(1)  --------->HSFB2a(2)               --------->ZAT2                     <---------ANAC58         -----  <---------HSFB2a(2)               <---------ZAT2                     <---------ANAC58         ----- <---------LBD16                    <---------At4g35610           <---------ANAC55(2)           -----   aattcccgaatcatatgcaatctgaaactaaactactctgctggaaaatttcgcgagatgggactatcacgttccgtggagctagaccaattcatcacaa  12855100                                                                                             <-------                                     <---------ARR11(3)                                 --------->CCA1(2)     <------ZmHOX2a(1)               --------->ARR11(3)                                --------->ARR14(2)  <------ZmHOX2a(1)        --------->CCA1(2)                       <------ZmHOX2a(1)   <---------ARR14(2) ---->ANAC58           <------ZmHOX2a(1)                 <---------ARR14(2)            --------->ARR11(3) ---->ANAC58     --------->At4g35610<------ZmHOX2a(1)   <------ZmHOX2a(1)         <-----------HVH21 ---->ANAC46<------ZmHOX2a(1) <------ZmHOX2a(1)       <---------TOE2(3)         --------->MYB46(3)  -   gcgaggaggaagaaggagaagcagaggagataggagaaggatttttcgaagcgattgaggaactagagaggatgactagagaaccatcagatatactcga  12855200                                                                                 <----------DOF2               --------->ARR11(3)       <---------ANAC46                       ------->TEIL       ---       --------->YAB1--------->HSFB2a(2)<---------ANAC58                     --------->ZAT18      <--     ------->TEIL    --------->HSFC1(1) <---------ANAC58                     <---------ZAT18      --- --HSFB2a(2)   <---------ARR11(3)     <---------YAB1                         <---------ZAT14   <----- -------->CCA1(2)    <---------HSFB2a(2)--------------------->WRI1    <-------TEIL       --------->ALFIN1   agagatgaatcatcgattatcttctagagaattgcaattgatgcttgtttacttcgcacaagaaggtagagattcatggtgtactttagaagtgtttgaa  12855300                                                                 <---------ANAC46                                                                 <------MYB46(1)                                                                 <------MYB83                                                                 ----------->GT1                                                                <------MYB46(1)                                                                <------MYB83                                                              <--------P                                                             <-------GAMYB                                                            --------->MYB55(2)        ----------->GT1                                     <---------MYB46(3)      --------->DAG2                                       <---------AtMYB61                       --     ---------->DOF2                                     <-----------RAV1(1)          <---------YAB1 ------>ATHB12                                           --------->ALFIN1      <---------WOX13(1)  -- -------MYB46(3)                                       <---------YAB1 <---------TOE2(3)  ------->TEIL -------->GT1                   --------->MYB52(1)     <---------ANAC46 --------->ARR11(3)         -- ----AtLEC2                   --------->ARR11(3)       <---------ANAC55(1)   --------->ATHB12   <----   tggttgaaaaaggagaatagagttgatgaagagataatggagttaatggtttcgattatgtgtggttgggttaagaaattgattgaagatgaatgtaatg  12855400  Previous    Next  AGI:  At2g30100.1    Description:  ubiquitin family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21413.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype (InterPro:IPR003591); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 12854905    to: 12859169    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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