Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <------ZmHOX2a(2)                                      --------->ARR11(3)                                      <---------ARR11(3)                        --------->ANAC55(2)                        <---------ANAC46              <----------DOF2        --------->GLK1(1)            ------->TEIL<---------ANAC55(2)         --------->ANAC55(2)         <---------GLK1(1)   <---------YAB1        --------------->AtSPL8     <------ZmHOX2a(1)  --------->ICU4                     <---------AHL20(2)  <------ZmHOX2a(2)     <---------ANAC58            --------->YAB1                   <---------ICU4 --------->ARR11(3)     <---------ANAC58            ---------->DOF2             --------->AHL20(2) <---------ARR11(3)    <---------TOE2(3)  --------->At4g35610            <----------ID1 --------->AHL20(2)   agagatcatctacgtacttttagtttacgtagttgaaggagatcatctaactaataaagattatagagaaccaatactacaaaaaaatcattttatatca  12831100                                                                                         ----------->GT1                                           <---------YAB1                                <------MYB46(1)                                         -------->ATHB1                                  <------MYB83                                         --------->ATHB51                               --------->MYB59                              <---------REM1(1)      --------->ATERF1(1)              --------->ARR14(1)                             <---------TOE2(3)      <---------ATERF1(1)               --------->CCA1(2)                          <---------WOX13(1)    --------->ANAC46                     --------->ARR11(1)                        --------->ATHB51 --------->YAB1                              <---------ARR14(2)                       <---------YAB1    <--------HAHB4                              --------->ARR11(3)                     --------->YAB1      <---------ICU4                 <----------DOF2 --------->MYB111(1)                   <---------ANAC46     <---------YAB1    ------>ZmHOX2a(1)        <---------TOE2(3)                   <---------ANAC55(2)  --------->ICU4  ----------->RAV1(2)        <---------TOE1(3)   cttgttttgaatatttgtattacttataattgatgtaagagaattattacaaggagcctcctgcaaatggttttctttgagttttaagatttggtagaaa  12831200                                                                             ------>MYB83                                                                             ------>MYB46(1)                                        <---------TOE2(3)                  <---------MYB46(2)                     <----------DOF2   ---------->DOF2                     <---------MYB59                     <---------DAG2 <----------DOF2                  --------------->AtSPL8                  <-----------GT1 <-------TEIL                    --------->ATHB12             ----------->GT1      --------->ZAT18               <---------WOX13(1)       --------->ANAC58           <---------ZAT18               <--------P <---------MYB111(1)       --------->ANAC58       <---------ICU4                  <---------MYB46(3)       --------->ANAC46    <---------HSFB2a(2)               <---------AtMYB61     --------->MYB52(1)    --------->HSFB2a(2)      --------->ALFIN1 <---------ICU4         ---------   aatgcaaaaacggaattgtataactttttccataagtgcattaaagtttaaacagtgtgagtattggttgattagtacctaatccattttctaaataaaa  12831300                                                                      ------>ZmHOX2a(2)                                                                     <---------At4g35610                                                                     --------->At4g35610                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                 <---------WOX13(1)                                                               --------->ATHB12                                                              <---------ATHB12              <--------        <--------P                                            --------->ICU4       <------ZmHOX2a(2)      <---------MYB46(3)          --------->DAG2     <---------ICU4 ------->TEIL  <---------ARR11(3) >AHL20(2)     ---------->DOF2   ---------->DOF2    --------->ICU4  <---------AGP1--------->ARR11(3)   acacatactggttgagaaaaagaatagtaggcccataaagcgcatattgcagtatttatggcccatgatggatctgaacttatagatcacttgcagtagc  12831400                                                                              <---------ANAC46                                                                     -------->P                                                                     ------>MYB83               ------>ZmHOX2a(2)                                     ------>MYB46(1)              --------->At4g35610                   --------->LBD16 <---------ALFIN1--------->ANAC46              <---------At4g35610                 <---------LBD16  --------->MYB46(3)           <----             <---------AGP1                --------->At4g35610     <---------MYB55(2)       ---------             --------->ARR14(2)            <---------At4g35610   --------->PCF2  <---------ARR14(2)             <---------ARR14(2)     <------ZmHOX2a(2)           <-----------GT1  --------->ARR14(2)          <---------WOX13(1)       --------->ARR11(3)    ------------>CBF--------->LBD16  <---------LBD16 -At4g35610  ------->TEIL          <---------ARR11(3)<---------MYB52(1)<---------LBD16 <---------GLK1(1)   catggcccattgatggatctgaagttcagaacttatagatcactcatctccctccggttttcaatttgacccacccggtttagtatacgaactccggttt  12831500                      --------->AHL20(2)                     --------->AHL20(2)                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              --------->AGP1              <---------ARR11(3)              --------->ARR11(3)              --------->ARR14(2)              <---------AGP1 <-----------GT1              <-----------ARR10              <---------ARR14(2) --------->ANAC58                             ------>NtERF2      ----------->HVH21     *TSS --------->ANAC58                   --------->ARR14(2)      --------->WRKY45<---------AHL20(2)                            <---------ARR14(2)      --------->WRKY38(1)  <---------AHL20(2)                    <---------ANAC58                 <--      --------->WRKY12--------->AHL20(1)                         <---------ANAC58        <<<<<<<<<TBF1    <----------DOF2  <---------AHL20(2)                <------ZmHOX2a(2)      --------->LBD16     --- -------TBP  <---------CCA1(2) --------->MYB46(3)     --------->ARR14(2)     <---------DEAR3(1) <---- >LBD16  -------->ZAP1<---------AHL20(1)              <---------ARR14(2)    <---------LBD16 <<<<<<<<<TBF1   atataactttgacccagatctaattttattttaaccagcaaatacaaaaaacttccgatcccccttagcgtttccttctccggcgatattcttcttcttc  12831600                                       <---------TOE2(3)                                       <---------TOE1(3)                                   <----------DOF2                                <---------MYB52(1)                             <---------TOE1(2)                                                 <-----                            ------>ZmHOX2a(1)                                    ------>ZmHOX2a(2)                          --------->HSFB2a(1)                          --------->LBD16         <-----                          <---------HSFB2a(1)                         --------->ANAC46       --------                          <---------HSFC1(2)                 <---------RVE1(1) <---------ARR11(3) -------At4g35610         --------->HSFC1(2)              --------->LBD16      --------->ARR11(3) ------>At4g35610        <------ZmHOX2a(2)  <---------MYB46(3)       <---------LBD16     <----------DOF2 -----DEAR3(1)          --------->ARR14(2)  --------->MYB52(2)   <---------AHL20(2)   ------>ZmHOX2a(1)   ggctcacattgcatcgtctctcactcgatccttcgttctttcaggtttgttatctcttccctgatattttatgcgcagttcgatcttcctcctttctctt  12831700                                                             <---------TOE1(2)                                                       <---------ANAC58      <---------DAG2                                   <---------ANAC58            <---------YAB1      <----------DOF2            --------->HSFB2a(2)  --------->At4g35610        <---------ANAC46 <---------MYB52(1)              <---------HSFB2a(2)  <---------At4g35610     <-----------RAV1(1) -----DOF2             <---------ZAT2            ------>ZmHOX2a(2)          <---------ANAC46 ----DAG2             --------->ANAC58          <---------WOX13(1)       <---------MYB52(1) ------->AGL15        --------->ANAC58      <---------WOX13(1)        ------>ZmHOX2a(2)  <---------ETT(1)   tttgttagctttatcgacaaatgtaagctagggttctcgcagagtaattgatcgatagcttccttcgtttgatctgttttgtgttgtgattccgacctct  12831800                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                               <-----                                                                                               ------                                                                                            ---------                                                                                            <--------                 <---------ANAC58                                          ------->TEIL    <-------TEIL       --------->ATHB51      <-----------GT1                               <-------TEIL  <---------GLK1(2)      <---------YAB1<---------ARR14(2)                              <---------DAG2       --------->ARR14(2)  ----------->GT1<---------ANAC58------>ZmHOX2a(1)----------->GT1   <----------DOF2      <---------ARR14(2)   tgaaccgtataattgaatcgcgtttccatagtttcctctcgatttttgaatcgcgttatacaattgtctactttatgtacatttcgcttcggattcgtaa  12831900                                                        ------>ZmHOX2a(2)  <---------ZAT2                                       <------ZmHOX2a(2)  --------->HSFC1(2)                                   --------->GLK1(1)  --------->ZAT2                                       --------->At4g35610  <---------HSFC1(2)                                  <---------ARR11(3) ---->GAMYB                                           --------->ARR14(2) ------>TOE1(3)                                       --------->ARR11(3) ---------AtMYB77                                     <---------ARR14(2) ----ARR14(2)                                        ================================HOX2a_HOX2a --->ARR14(2)                                        <------ZmHOX2a(1) >ANAC55(2)                              <---------AHL20(2)<---------AtLEC2   ------>ZmHOX2a(2)    <- -ANAC55(2)                   --------->ATHB12  <----------DOF2             --------->ARR11(3)    <--   ccgtagcttcgatttttgtgtttgaatcggtttgattagataatttatgcctttaggatctgcatcgattcgaatttcgatcttgaaatctatactactg  12832000  Previous    Next  AGI:  At2g30050.1    Description:  transducin family protein / WD-40 repeat family protein. similar to protein transport protein SEC13 family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G01340.1); similar to protein transport protein SEC13 family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G01340.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN73348.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 12831528    to: 12833761    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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