Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------YAB1                                                        --------------->AGL15                                                        <---------------AGL15                                                       ==============================================                                                       <-----------------AGL2                                                       <-----------------AG                                                       <-----------------AGL3                                      ===================================MADS_MADS                                      ===============================================================                                      ----------------->AGL3                     --------->AHL20(1)              <---------YAB1                     <---------AHL20(1)    --------->DAG2                                 <---------ARR11(3)                     --------->AHL20(2)--------------->AGL15               <---------AHL20(1)                     <---------AHL20(2)<---------------AGL15               --------->ARR11(3)                    --------->AHL20(2)----------------->AG                 --------->AHL20(1)                    <---------AHL20(2)----------------->AGL1        <---------YAB1       --------->RVE1(1)   --------->ICU4  <---------YAB1     ----------------->AGL2  <---------TOE2(3)          --------->CCA1(1) ->ZAT18        <---------YAB1  --------->DAG2      <---------GLK1(2)   --------->AHL20(2)--------->ARR11(3) --ZAT18     <---------YAB1    ---------->DOF2   <---------WOX13(1) ----------->GT1  --------->AHL20(2)   tagacataatttgtttttattattaaattgacataaagttaccaaaaattgaatgattcttattttggttatgaaaaaatattggaataaaaaatctcat  12821100                <---------ICU4                --------->ATHB51                <--------HAHB4  <---------RVE1(1)               --------->ICU4   <---------CCA1(1)               <---------YAB1  <---------ARR11(3)              --------------->AGL15              <---------------AGL15             --------->YAB1    --------->ARR11(3)           <-----------GT1    --------->YAB1                        <---------WRKY38(1)     <-------TEIL    <---------TOE2(3)   <---------MYB52(1)         <---------WRKY12    <-----------GT1  ----------->GT1<-----------GT1----------->RAV1(1)          <------ZmHOX2a(1) =============================MADS_MADS <----------DOF2             <---------WRKY45  --------->ANAC58 =============================MADS_MADS--------->TOE2(3)           --------->WRKY18(1)--------->ANAC58   ggatatatacatttttcattattaagaaaaaatgatattttcctttattttgccaacaaaaaaaaactggtcaacaagagtaggattcaagctaattttg  12821200                                       ----------->RAV1(1)                                    <------ZmHOX2a(1)             <-----------GT1       <----------ID1          --------->YAB1        ---------->DOF2           ---------->DOF2          --------->AHL20(2)----------->GT1       <---------TOE2(3)        --------->AHL20(2)---------->DOF2       --------->MYB52(1)                     ---------->DOF2   ------>ZmHOX2a(1)   --------->HSFB2a(2)      ---------->DOF2                     <-----------GT1  --------->TOE2(3)    <---------HSFB2a(2)--------->TOE2(3)                 <---------TOE2(3)--------   ttttcctcaaaataatatccattttgtagaaagtaaaaggacaacataaataaaggaaatgaaagttgtaagggcataaatgttatttacaaagtcaaag  12821300                                                         <-----------GT1        <---------AHL20(2)                               --------->ANAC58       <---------ICU4            --------->AHL20(2)                               --------->ANAC58       --------->YAB1    <----------DOF2 ----------->GT1              <---------LBD16        <-------TEIL      --------->TOE2(3)    <<<<<<<<<TBF1 -->DOF2        ---------->DOF2--------->ANAC46    --------->YAB1  <----------DOF2  <-----------GT1   agactgaaaaactttgaataaagctcgataaacacggactctaattcattcaatattcattaccttcttctttcctttatatttaaaaaccttcttcttc  12821400                                                             <---------At4g35610                                                      <---------ICU4                           --------->MYB52(1)    ------------>CBF           <-----------TGA1------------------------>ANAC81   --------->At4g35610           <-----------HVH21       <------ZmHOX2a(1)  --------->YAB1                   *TSS    ------   tctctctgtacatcgtcacaacaaaaaaaaaacagaaggagaagaaacaaaaacaataatctcagcaaaaacaaatctctactcatcgaaatcgaaatca  12821500                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                            ---------                            <---------SPL7                                                  =========                          <------NtERF2                                                     =========                         ------>NtERF2                                                      ---------                        <---------DEAR3(1)                                                  <--------                        --------->DEAR3(1)           --------->DEAR3(1)              <---------GLK1(2)                       --------->ATERF1(1)        <-----------GT1             <---------ARR14(2)                      <-----------HVH21    <---------MYB52(1)                 <---------ARR11(3)                      <---------ATERF1(1) --------------------->WRI1          --------->ARR14(2)   --                     --------->DEAR3(1)   --------->LBD16                     --------->ARR11(3)  ---              <---------ANAC58          <---------LBD16                    --------->MYB46(3)<------- --->YAB1     <---------ANAC58   <---------AHL20(2)<---------At5g28300   ----------->RAV1(1)---------   aaatatagaaacgatgtcttgctccgtcgccgtatgtaattctccggtgttttcaccgtcgtcttctctattctgcaacaaatcttcgattctctcgtca  12821600  --------->ANAC58  --------->ANAC58 ----HVH21                                                                <---------ARR14(2) -TGA1a                                                                   <-----------ARR10 >bZIP60(1)                                                         --------->AtMYB61 >TGA1a                                                             <---------ALFIN1 ====================bZIP_DOF                                       --------->DEAR3(1) ====================bZIP_DOF                                      --------->MYB46(3) >ANAC46                                                           <---------MYB55(2) -O2 --------->GLK1(2)                                           --------->ANAC46     <---------ARR11(3) ------->LBD16                                                  <---------MYB55(2)   <---------CCA1(2) ------>ANAC46                                       ------>ZmHOX2a(1)   <---------MYB52(1)     <---- ----TGA1 <----------DOF2            --------->TOE1(3)          --------->MYB46(3) ------>ZmHOX2a(1) >O2<---------GLK1(2) <----------DOF2--------->TOE2(3)   ------>ZmHOX2a(1)--------->ARR14(2)    <----   ccgcaagaatctctttctctaacgctttctcatcgcaaacctcagacctcttctccttcctctccatccaccaccgtttcttctcctaaatctccatttc  12821700                                                          ------->TEIL                                                          --------->ARR14(2)          <------MYB83                                                          --------->GLK1(2)           <------MYB46(1)                                                          <---------ARR14(2)         <---------AtMYB61                                                      ================================HOX2a_HOX2a                     <---------LBD16                  ===========================HOX2a_HOX2a                     --------->SPL7                   ------>ZmHOX2a(2)              <---------DEAR3(1)         --------->LBD16 <---------GLK1(2)           <---------At4g35610           <---------MYB52(1)        --------->HSFC1(1)                           --------->At4g35610          --------->HSFB2a(2)        <---------HSFC1(1)--------->ARR14(1)        --------->ARR14(2)            --------->LBD16        --------->HSFB2a(2)                   <----------DOF2                     <---------HSFB2a(2)        <---------HSFB2a(2)       ------>ZmHOX2a(1) <---------ARR14(2)           --------->HSFB2a(2)     <---------ARR14(2)  --------->ARR14(2)<---------ARR11(3)                    <---------HSFB2a(2)     --------->ARR14(2)  <---------ARR14(2)--------->ARR11(3)                    <---------LBD16    <---------MYB52(1) --------->LBD16   <---------MYB52(1)                     <---------LBD16 -----ANAC58       <---------SPL7 ===========================HOX2a_HOX2a       ------>ZmHOX2a(1)    < -----ANAC58   --------->TOE2(2)----------->RAV1(2) <---------AGP1        ------>ZmHOX2a(1)   -------   gtctccgtttccagaaacctccgtccggattcgctcctggtccattatcttttggatctgaatctgtttctgcatcctctcctccgggaggtgttttaaa  12821800                                                                                     <------NtERF2                                                                                  --------->ATERF1(1)                                          <---------ARR14(2)                     <---------ATERF1(1)                                          --------->ARR14(2)                    ----------->HVH21                                      <---------ANAC46                         <------NtERF2                                      <---------ANAC58                         --------->ATERF1(1)                <---------ANAC58 <-----------RAV1(1)                         <---------DEAR3(1)                <---------ANAC58 <---------REM1(1)                           <---------ANAC46          -------->P           <------MYB83                                <---------MYB46(3)     ---          ------>MYB46(1)      <------MYB46(1)                          <-----------RAV1(1)       ---          ------>MYB83        <---------AtMYB61                        <----------CDC5 ------>NtERF2          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <------NtERF2 ------>NtERF2 <--   --------->DEAR3(2)         <---------MYB46(3)                <---------At4g35610--------->DEAR3(1) <---------ARR14(2)         <---------MYB52(1)                  --------->At4g35610<---------DEAR3(1) --------->ARR14(2)        --------->ATHB12      --------->At4g35610  <---------At4g35610        ---- ------ZmHOX2a(1)      <-----------GT1<---------ANAC58  --------->GLK1(1) --------->ALFIN1     <----- --->DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------At4g35610  --------->At4g35610     <------ZmHOX2a(1)   gaggaaacgacctacaaggcttgatataccgattggtgttgctggatttgtagctccgatttcttcatcggccgctgtggctgcgacgccgagagaggag  12821900                                                                        ------>ZmHOX2a(2)                                <---------YAB1                        <---------ARR11(3)                                <---------------AGL15                 <---------ARR14(2)                            --------->KAN4(2)                         --------->ARR14(2)        <----                         <-------GAMYB                                --------->ARR11(3)     -------- ------>REM1(2)         ----------->GT1                    --------->ANAC58                 <-------- ------>ZAT14           <---------MYB46(3)                 --------->ANAC58      --------->At4g35610 -------ZAT14          <---------YAB1            ==============================HOX2a_HOX2a ------>MYB83 ----->ALFIN1       --------->ALFIN1             <------ZmHOX2a(1)   <------ZmHOX2a(1)     ------>MYB46(1) ----ANAC46      --------->DAG2 --------------->AGL15      --------->GLK1(2)     <---------At4g35610   tgtagagaggttgagagagaaggtgatggttattctgtttattgtaagagaggaagaagagaagctatggaggatcgtttctctgctatcaccaatcttc  12822000  Previous    Next  AGI:  At2g30020.1    Description:  protein phosphatase 2C, putative / PP2C, putative. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT1G07160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21431.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045); contains InterPro domain Protein phosphatase 2C, manganese/magnesium aspartate binding site; (InterPro:IPR000222) Range:  from: 12821487    to: 12823165    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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