Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->ORA47(1)                                                            --------->DEAR3(1)                                              --------->ZAT6--------->MYB46(3)       <----------DOF2                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      ------>ZmHOX2a(2)                 <---------ANAC55(2)--------->At4g35610    --------->ARR11(3)               <------ZmHOX2a(2) <-----------HVH21    <---------ARR11(3)           --------->ANAC55(1)  --------->bZIP60(2) ---------At4g35610              --------->ANAC58     --------->ANAC46 -------->At4g35610              --------->ANAC58--------->AtMYB61 ---------ZAT2                   --------->ANAC46<---------ALFIN1  --------->AHL20(2) -----HSFB2a(2)                  --------->ANAC55(2)--------->AtMYB61 ---->HSFB2a(2)                  <---------ANAC55(2)<---------ALFIN1                        <-------- ----LBD16                      <---------LBD16<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <-------- ->GLK1(2)  <----------ID1 <-----------GT1    --------->ANAC46     <---------ATHB12      <-----------GT1   ggagctgatcttttaagacaaacactgttttacatacggatcatgtgaacaccaccacatcaccggccaataaatgtagtatcaaacattttcacttttt  12806100                  --------->CCA1(2)               <---------YAB1             --------->CCA1(2)            --------->ARR11(1)            <---------ARR11(3)              --------------->AGL15            --------->ARR11(3)              <---------DAG2                                <---------DOF5.7(2) -DAG2    ----------->ARR10                 <----------DOF2                               --------->MYB52(1) --DOF2<------ZmHOX2a(1)                    <---------------AGL15         --------->AHL20(2)     ----   cttatgtgaggaaagatatgatatgaactagtatatgttatcgatacttttttgagtaaaaccagagaaaaaaaaaaaaaattcttatgagataacggat  12806200                           <---------ANAC58                 <---------AHL20(2)                 --------->AHL20(1)                 <---------AHL20(1)                                                               ---                 --------->AHL20(2)                                --------->At5g28300     ----------  --------->GLK1(2)        <---------ANAC46                       ----------->GT1      <---------ZAT14 <---------GLK1(2)         <---------ANAC58                 --------->ANAC46           --------->ZAT14 --------->ARR11(3)        ----------->GT1                <-----------GT1              <---------ARR14(2) ------>DOF2    <---------ATHB12                        <---------AHL20(2)             --------->ARR14(2)   aaagattctggtgaggcaataaatttagttcgtgaaaattggataaccaagaacatatttatacaaaactgtaaatagttgaaactgagtatacagaaaa  12806300                                                                                       <xxxxxxxxxxxxx              <---------------AtSPL8       --------->At4g35610                    --------->YAB1              --------->DAG2               <---------At4g35610                <---------MYB52(2)             ---------->DOF2 ---------->DOF2  --------->At4g35610             --------->MYB46(3) ---------->DOF2  --------->MYB52(1)    <---------ANAC58                   <------ZmHOX2a(1) ------>AHL20(2)  ------->TEIL          <---------ANAC58                   <----------ID1           < ->GT1 ----------->GT1  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <---------------AtSPL8   <--   ataaaaagagggagaaaaagtacctgaaaatgaaagactgatgcgagcagaagagagaagagcaaatgtgaagaagaggaacaaacataacccaattctt  12806400                                                                                                *TSS                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                      ------>NtERF2       --------->ORA47(1)                                                                     --------->ANAC58    --------->DEAR3(1)                                                                     --------->ANAC46   --------->DEAR3(2)                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)----------->RAV1(1)   <------             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <---------AHL20(2)      --------->MYB52(1)          <-----------GT1           <-----------GT1       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<-----     <---------YAB1            <----------DOF2           <---------CCA1(2)         ----------->HVH21 xxxxxxxxxsmallRNA(fl3)    <----------DOF2      <---------ALFIN1     --------->ANAC58 <---------ALFIN1 ------ZmHOX2a(1)     <-----------GT1  <----------DOF2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<------- -------TOE2(3)   <------------------------ANAC81      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxx   gaggatgatgaataacccattgttttactctttctttttttctttctctctcacctcttgtatatttatagacgccacaaaacgtctcacaccggccttt  12806500                                                 <---------ANAC46                                                 <---------ANAC58                   --------->AHL20(2)    --------->YAB1                   <---------AHL20(2) <---------AHL20(2)               --------->AHL20(2)    --------->AHL20(2)         <---------DAG2 --------->HSFB2a(2)              <---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <--------- <---------HSFB2a(2) ----------->TBP <---------AHL20(2)         <----------DOF2            <---------DAG2 ----DOF2  ----------->GT1  <----------DOF2      <---------ANAC58                         <---------ANAC58 ----MYB52(1)  <---------AHL20(2)<---------AHL20(2) ---------->DOF2  <-----------GT1      <---------ANAC58 ---DOF2 <----------DOF2 <-----------GT1<---------YAB1       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <- xxxxxxxxxxxxx>smallRNA(si3)<---------DAG2 <---------YAB1   <---------CCA1(2)           <-----------GT1   agtctcgaagactttgttaaattatatatactttttttatttattatagttgcttcaagcgcataactttataacattttaagacatattttgctttttt  12806600                                                    --------->LBD16                              xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          <------MYB83    --------->ANAC55(2)                          <------MYB46(1) <---------ANAC55(2)                         --------->MYB111(2)      --------->ANAC46      --------->TOE2(3)                         --------->MYB46(2)      <XXXXXXXXXXXXXXXXXXXXMIR395B/C/F                         --------->MYB59 <---------TOE2(3)              --------->TOE1(3)                         --------->MYB111(1) ---------->DOF2            <----------DOF2                        <---------MYB55(1)<---------ANAC46           <-----------GT1                      <------MYB46(1)    <-----------------------TaNAC69(2) -DOF2      ------->TEIL<--------P    <---------WOX13(1)    <----------DOF2                        <- ----------GT1        <------MYB83 --------->ICU4<XXXXXXXXXXXXXXXXXXXXMIR395A/D/E           ---------   ttaacaacatgatgcatttacatttggtaggtatgccaagattgacgtaaaccccccaaatactttagaattaactttaacaaaaattttaaaaatgtta  12806700                                                                                                  ---                                       <---------YAB1                                             <--                           --------->AtMYB61                                                      <--                          --------->MYB46(3)                                                      ---                        --------->ANAC46                                                        <----                       ------->GAMYB  --------->TOE2(3)                                         -----     ------->TEIL     <---------MYB52(2)        ---------->DOF2                                 <---- --------AHL20(2)     --------->MYB46(3)    --------->YAB1                  <---------ATHB12    ----- -->GT1              XXXXXXXXXXXXXXXXXXXX>MIR162A/B                    >>>>>>>>>>>>>>>>>LFY--------->AtLEC2   ttttatgaacttattcaaatatcaacaaaccactgcatattgttaatgagaaaagaatataagaaaaactagtcaccaatgtttatatgtttcatgaaaa  12806800                                                <-----------GT1                                               --------->KAN4(2)                                              <---------KAN4(1)                                              <----------TaMYB80                                             --------->ARR14(2)                                             ------->TEIL        <---------ARR11(3)                   <---------ARR14(2) ------>AHL20(1)                             ---------->TaMYB80    --------->YAB1 -------AHL20(1)                          <---------ANAC46      --------->YAB1 -------ARR11(3)                          --------->ANAC55(2)  <---------AHL20(2) ------>ARR11(3)      <---------ICU4      <---------ANAC55(2)  --------->AHL20(2)               ----- -----AHL20(1)     --------->YAB1  <---------ANAC58          --------->TOE2(3)                 <----- ---->ARR11(3)    --------->AHL20(2) <---------ICU4  <----------DOF2 <-----------GT1           ------ -----ARR11(3)  --------->TOE2(3)  --------->ANAC55(2)      --------->REM1(1)         ----------->GT1 ---->AHL20(1)<-------TEIL         <---------ANAC58  <---------MYB52(1)--------->ANAC46        <-----   tattttccaagatagtttcattaaaaattagaaacttacttatcacgtatattccctttgctacattaattatacgctcttacacaattcgaaaaataag  12806900                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                             <---------ANAC46                                       <                                             <---------ANAC58                                 -------                                             <---------ANAC58            <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                      ------>ZmHOX2a(1)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                   <------ZmHOX2a(2)                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  <---------ARR14(2)              <---------ANAC58       ----------->GT1                                  --------->ARR14(2)              <---------ANAC58      <---------TOE2(3)     <------MYB46(1)           --------->At4g35610                <---------ANAC46      --------->MYB59     <------MYB83           <---------At4g35610<------NtERF2 ------>ZmHOX2a(2)          <---------TOE2(2) ------>GT1             <---------REM1(1) --------->ANAC46 <---------ARR11(3)         <xxxxxxxxxxxxxx ----TOE1(3)           <---------YAB1 ==============================HOX2a_HOX2a      <---------ANAC46 --->DAG2           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->ARR11(3)     xxxxxxxxxxxxxxxxxxx ----TOE2(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <---------At4g35610      ----------->GT1 xxxxx   gttaagttggtatgttgaaccagttattgtagcagcgatcctccaaggcgtagattgagatgatcttgtcttgtatatcaaatagtgacttaggttaaaa  12807000  Previous    Next  AGI:  At2g29995.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07175.1) Range:  from: 12803984    to: 12806496    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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