Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                          <------NtERF2                                                                                         <---------RAP2.6(3)        ----------->RAV1(1)        --------->TOE2(3)                                     ------>NtERF2     --------->ANAC46              --------->TOE1(3)                               --------->GLK1(1) ---------ARR14(2)                --------->At4g35610                              <---------GLK1(1) ------>TEIL              --------->GLK1(2)                                       <---------ARR14(2) -------->ARR14(2)        <---------ARR14(2)                                      --------->ARR14(2) --------CCA1(2)          --------->ARR14(2)                                  <---------At4g35610 --->At4g35610       <-----------GT1                                          --------->At4g35610   - ----At4g35610     --------->AHL20(2)       --------->MYB46(3)         --------->YAB1   <---------ANAC46 --->ZAT2 --------->MYB46(3)      <---------At4g35610                 <---------ATHB12<---------At5g28300   tgtatctgagcaacaatccattttaacaaatctgtaagcttaatgaacaaacattttgactaaaatcatcgaatcataccagcggatttgccgtcgatct  12777300                                             <---------ANAC58                                             <---------ANAC46                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  --------->ARR14(2)                                  <---------ARR11(3)                                  <---------ARR14(2)                                  --------->AGP1                                  <---------ARR14(3)                                  --------->ARR14(3)       --------->MYB52(1)                                  --------->ARR11(3)     --------->MYB46(3)       --------->YAB1                                ----------->ARR10    <---------AHL20(2)          <---------YAB1                      <---------ARR14(2)     <---------AtLEC2                  --------->YAB1 >ZmHOX2a(2)          <-----------GT1        <---------ANAC58      --------->CCA1(2) --------->YAB1 -------->REM1(1)     --------->ARR14(2)<----------DOF2<-----------GT1        --------------->AGL15   ctacatcgaagtaaaccttgtgagtaacctccttgagatcttcttttgcctgaattttaacaaacagagatttgaactctctcataatagtcacatagtt  12777400                                                                          ------->TEIL                                                                      <---------TOE2(3)                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                                 --------->ARR11(3)                                                                 <---------ARR14(2)                                                                 <---------AGP1                                     ----------->GT1             --------->AGP1                --------->ZAT6       --------->At4g35610         <---------ARR11(3)           --------->YAB1       --------->WOX13(1)              <---------CCA1(2)       --------->ANAC58      --------->LBD16        --------->ANAC58               <---------REM1(1)           --------->ANAC58      ------>ZmHOX2a(1)      --------->ANAC58              <---------TOE2(3)    --------->MYB52(2)   cttaattcctgaagtataacactagaagcttaagcaatctggtgacttccattagaatgttgatgtagatctaatgtatcgtttgtggtaacgaaacatt  12777500                     --------->CCA1(2)                    <---------ARR14(2)                    --------->ARR14(2)                   <------ZmHOX2a(1)              --------->HSFB2a(2)              <---------HSFB2a(2)                                                            <-------            <-------TEIL                                                     --------->REM1(2)           --------->CCA1(2)        --------->TOE2(3)                      --------->LBD16  <--------          --------->ARR11(1)       <---------ANAC46                       <---------ANAC46  <--------          <---------GLK1(2)        --------->At4g35610                <---------GLK1(1) <---------ANAC58     --------->CCA1(2)             <---------ANAC55(2)         <------ZmHOX2a(1)    ---------->DOF2    --------->ARR11(3)             ----------->RAV1(2)   --------->LBD16 <-----------------------TaNAC69(2)    <---------ARR14(2) <---------YAB1                  <------NtERF2  --------->GLK1(1) <---------ANAC58   tgaacagatatagattcgagaggatatgaatgaagttacctgaattgaagctatggctccgaagaggaagagagttccgagtagaataaagcttgctttc  12777600                                                                                                    -                                                                                                 ----                                                                                      ------------>CBF                                                <---------ZAT14                      <------ZmHOX2a(2)                                                --------->ZAT14                     <---------ARR14(2) ---DOF2                            ----------->GT1                  --------->ICU4 --------->ARR14(2) -ANAC58     <---------MYB52(1)    --------->DAG2       *TSS ---------->DOF2    <-----------GT1------ -ANAC58   ------>ZmHOX2a(2)      ---------->DOF2    <---------MYB46(3)    <---------YAB1  --------->YAB1   gccatcttcgtgatcgtttttttttttctcaaatcgaaaagtgaaaacagagtagtagttgaagaaaggaaatgtttatgtttgacgatccaatgctaac  12777700                                                  --------->TCP16(1)                                                  --------->PCF5                                                 <---------TCP16(2)                                          <---------AHL20(2)                                         <---------AHL20(2)                                         --------->AHL20(1)                                         --------->AHL20(2)                         --------->ZAT6             <------------CBF        <---------AHL20(2)       --------->LBD16  <---------ICU4           <---------YAB1           <---------AHL20(2)       --------->HSFB2a(2)   <---------At5g28300         <---------MYB46(3)         --------->AHL20(2)<----------DOF2         --------->ICU4 -------->ANAC46                <----------DOF2--------->ALFIN1               <---------YAB1 ----->TOE2(2)              --------->ZAT18   --------------->AtSPL8     <---------CCA1(2)    <------ ----->ARR10--------->ATHB12<---------ZAT18 <---------TOE2(3)<---------HSFB2a(2)  <-----------GT1   atacgctggagttgttattggacttcttagtgggctttttaaatttaatgtggacccttttatccagaacaacttgtatcatttttacagtattggtttt  12777800                                                        ------>ZmHOX2a(1)                                               --------->ANAC55(2)                                        --------->AHL20(2)           <---------ICU4              <---                              <----------DOF2 <---------TOE2(3)      --------->YAB1             -----                     <---------ICU4     <---------AHL20(2)          <---------YAB1        --------->ANAC46                    --------->ICU4      <---------AHL20(1)          --------->ICU4       <---------TOE2(3)                <---------ARR11(3)      --------->AHL20(1)        <---------ICU4   --------->AHL20(1)   ----------->GT1--------->YAB1  <-----------GT1      --------->TOE2(3)           <---------AHL20(2) ----DOF2   --------->YAB1<----------DOF2<---------AHL20(2)       --------->YAB1   --------->AHL20(2)   atggtgagaaaatatcaaaatcataatgctttctttatacaatttattcaggtaattcctcaatttcatcatcatgaaattgaaattttttgacgaaacc  12777900                                                                      <---------ANAC55(2)                                                                      --------->ANAC55(2)                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                   --------->ARR14(2)                                                              ----------->GT1                                                            <---------ZAT14                                                          --------->ZAT18                                                          --------->ZAT14                                                        <---------------AtSPL8                                                       <---------ANAC58                                                       <---------ANAC46--------->LBD16                  ---------->DOF2                      <---------ANAC58<-----------HVH21      <---------ANAC58                            <---------YAB1   <---------ARR14(2)      <---------ANAC58   <-----------HVH21        --------->ICU4   --------->GLK1(2) -------DOF2    --------->MYB46(3)              --------->YAB1<---------ZAT6                 <------- ---->TOE2(3) ----------->RAV1(1)         <----------DOF2 <---------ZAT14                    <-------   tttttttttcttgtggcaacaaaagaaggtcagagaagactagtcttttgttataatgggtgtactgtgaatccgtgagagaataactcttaatttctta  12778000                                                        --------->ZAT2      ---------->DOF2                         <----------DOF2     --------->YAB1                           <---------DAG2    <---------YAB1                    <-------TEIL      <---------ZAT2 --ANAC58                         <---------TOE2(2)   ------>ZmHOX2a(1) --ANAC58                       --------->TOE2(2) <-----------GT1    <-----------GT1   ctgaccattatagctcagaggtaaatgttttcaacataggttcattcacttttttcctagctgtgtttaatattccatacatatcagtatgcattagtag  12778100                                     <---------ATHB12      <-----------GT1                                  <-----------GT1       --------->ARR11(3)                             --------->ARR11(3)         <---------ARR11(3)                             --------->AHL20(1)         <---------AHL20(1)                             <---------AHL20(1)         --------->AHL20(1)                             <---------ARR11(3)       --------->AHL20(1)                           --------->AHL20(1)         <---------AHL20(1)                           <---------AHL20(2)         <---------AHL20(2)                           <---------AHL20(1)      --------->AHL20(2)                ----------->GT1                        --------->AHL20(2)        <---------AHL20(2)          ---------->DOF2--------                        <---------AHL20(2)       --------->AHL20(2)   <XXXXXXXXXXXXXXXXXXXXXMIR853   caaaaaatactgctaatttcaaagattaaaatattttcactcatttgaaaatttaaaatattttctatatttctccaaaaaaaagaggggtttttttata  12778200  Previous    Next  AGI:  At2g29960.1    Description:  CYP5 (cyclophilin 5); peptidyl-prolyl cis-trans isomerase. Identical to Peptidyl-prolyl cis-trans isomerase CYP19-4 precursor (CYP19-4) [Arabidopsis Thaliana] (GB:Q8LDP4;GB:O22515;GB:O80876); similar to ROC7 (rotamase CyP 7), peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT5G58710.1); similar to unknown [Populus trichocarpa] (GB:ABK93462.1); contains InterPro domain Cyclophilin-like (InterPro:IPR015891); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; (InterPro:IPR002130) Range:  from: 12776110    to: 12777656    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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