Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->CCA1(2)                             --------->ARR14(2)                             <---------ARR14(2)                        --------->MYB52(1)                                                         <-               --------->At4g35610                                                                ---        <---------GLK1(2) <---------ANAC46                                                      <----      ----------->ARR10----------->HVH21                                           <---------At4g35610 ----->At4g35610 --------->ANAC58                                                  --------->At4g35610 ------At4g35610 --------->ANAC58      ----------->RAV1(1)                       <-----------GT1----- ----->ZAT2    <---------At4g35610   <-------TEIL  ----------->GT1 --------->AHL20(2)         <------   gctcagagttgattctcagaagccagtgacggatatagatgcaacaagaagagaggtaaaaccctgcaatttcatatagaaatttagctctcttatatac  12756400                                   <---------ANAC58                                   <---------ANAC58 --------ALFIN1                <-----------RAV1(2) ------>ANAC46          <-----------GT1 -------GT1            <-----------GT1           ---------->DOF2                <---------GLK1(1) ---->ANAC46          <---------AHL20(2)  --------->MYB52(1)               ----------->GT1      ----- -----GT1            --------->AHL20(2) <---------------AGL15      --------->CCA1(2)          <------   accacatgaatacttcaatgcaattttatctcttcaggcgtacttaacagagaaagagtttgaagagagatttggaatggcgaaatctgagttctatgca  12756500                                                                         ---------->DOF2                                                               <------ZmHOX2a(2)                                                              <---------ARR14(2)                                                              <-----------ARR10                                                              --------->ARR14(3)                                                              <---------ARR14(3)                                                              --------->ARR11(3)                                                              --------->AGP1                                        <----------DOF2       --------->ARR14(2)                                       <---------ICU4         <---------ARR11(3)                             <---------ARR11(3)             ----------->ARR10                     ---  ---------->DOF2            --------->ARR11(3)         <---------ZAT6----------->RAV1(1)         --- -->TEIL                    --------->RVE1(1)--------->HSFB2a(2) <----------DOF2               ------ ---ZAT18                   --------->CCA1(1)<---------HSFB2a(2)------>ZmHOX2a(2) <---------AHL20(2)-   cttccaaagtggaaacagaataaactcaaaatatctcttcatcttttctaaaaacctagagtaagatctttgcaacaaagctatttttttgggtcttacc  12756600                                                                                     ------>MYB83                                                                                     ------>MYB46(1)                                                                                   <---------MYB111(1)                                                                                   <---------MYB46(2)                                                                                   --------->AtMYB61                                                                                   --------->MYB46(3)                                                                             --------->ANAC46    ----                                                                           <-----------GT1       ---- --->MYB46(1)                                                   ----------->GT1   --------->ANAC58 --->MYB83    --------->ICU4            --------->LBD16<---------TOE2(3)   --------->YAB1 ---------->DOF2 ----------->AG                         ------>ZmHOX2a(1)     <---------ANAC58    --------->ANAC46<-- ---------->GT1                       ----------->RAV1(2)     <---------ANAC58    --------->ANAC58---   aaatgtaaaaactgtaatgtttttgtttattgcaatgacctcctgatatataagtttgaggctagcctgttacaaaatcacaacaccaaacaaaaagaca  12756700                                                           --------->ARR14(2)                                                        <---------ANAC46                                                     --------->bZIP60(1)                                                     <---------O2             <-------MYC2                            --------->O2             <-------MYC3                            <---------bZIP60(1)          <---------ALFIN1                      ------>MYB46(1)  >>>>>>>>>>AGL22                               ------>MYB83  >>>>>>>>>>AGL24                               --------->MYB52(1)  >>>>>>>>>>AGL20 <---------RAP2.6(3)         --------->AtMYB61         <---------ANAC46 ----->ANAC58------->MYC3                    --------->MYB46(3)         <---------ANAC58 ----->ANAC58------->MYC2         <-------TEIL------->GAMYB<---------ARR14(2) ---------------AGL3     <-----------HVH21  --------->ANAC58            <---------ANAC58 ------>TOE2(3) ----------------->AGL1      --------->ANAC58   <---------LBD16   cctaaatatggaccacatgccttcatgggtcatagtttcatactgcaaccaaacgacgtcgtatttggggaatgacttgaataaaactcacaaaattcag  12756800                          --------->ANAC58                          --------->ANAC58                         --------->SPL7                         <-------TEIL                     --------------->AtSPL3                     --------------->AtSPL8                     <---------------AtSPL3                     <---------------AtSPL8                                                    ------                    --------->DAG2                 --------->YAB1                              <-----                   ---------->DOF2               ------>ZmHOX2a(1)                            -------           <---------GLK1(1)             ----------->RAV1(2)                             --------->At4g35610           --------->GLK1(1)    <---------MYB52(1) --------->REM1(1)                     <---------At4g35610      ---------->DOF2--------->DAG2<---------At4g35610                                ---------->DOF2     <---------AHL20(2)--------->TOE1(2) <---------At4g35610                    <---------ANAC58     --------->AHL20(2)*TSS    <----------DOF2 ------>ZmHOX2a(2)                <---------ANAC58  <--   ttcttaataaaagaaatctgaaaaaggtacgacctttagcttcttctgatccttcatcatcttcatcgaatttgtcaatttgacttgccaaagctgaaat  12756900         --------->MYB52(1)       --------->MYB46(3)      --------->ANAC58      --------->ANAC58      <<<<<<<<<<<<<<<<<LFY     --------->ZAT18                                       --------->ARR11(3)  <---------ANAC58                                  <---------ANAC46  <---------ANAC58            <-----------RAV1(2)   <------MYB83 --->ARR11(3)                 <---------HSFB2a(2)   <------MYB46(1)            ----------->RAV1(2) ----ARR11(3)          ---------->DOF2         --------->ATHB12            <---------ALFIN1 -->GLK1(1)<---------ATHB12   --------->HSFB2a(2)   <---------ANAC55(2)   ------>ZmHOX2a(1) --------DOF2   ------>ZmHOX2a(2)             <-------TEIL <---------ARR11(3)<---------ALFIN1       <   ctttgagtacccaatggatcgaaatcaaagacccagaagcattttggattcattaggtgaagaactcatcgcaatcctcacacctgtctcgatttgtatg  12757000                                    --------->HSFC1(2)                                    --------->HSFB2a(1)                       --------->At4g35610                                    <---------HSFC1(2)                        <---------ZAT2                                --------->DEAR3(1)                            --------->ZAT2                                <---------ETT(1)                              <---------At4g35610                                ----------->HVH21                          --------->LBD16                         ------>ZmHOX2a(1)                                --------->DEAR3(1)                        --------->TOE1(3)                                <------NtERF2                     ------->TEIL------>NtERF2                          ------>NtERF2                     --------->ARR14(2)                        ------>ZmHOX2a(1)    <---------MYB52(1)  --------->TOE2(3)          <---------At4g35610 <---------ALFIN1   <-------GAMYB     <---------ARR14(2)         ------>ZmHOX2a(1)     --------->MYB46(3)            < ---------At5g28300 <---------CCA1(2)     <<<<<<<<<TBF1 <----------DOF2--------->DEAR3(1)          <-   ttcaccgttgttcttctggtctgtatcctaaactccgacccttcttcttcctccgcttctttctcctctatagccaccgcagcttactctgagagcgatt  12757100                          --------->ZAT18                       <-----------RAV1(1)                       <------MYB83 <---------GLK1(1)--------->At4g35610                       <------MYB46(1)              <---------DEAR3(1)                      <---------TOE2(2)            <---------------------WRI1          <----------ID1  <---------ZAT18  <---------ANAC46 --------->MYB46(3)                 <-----     ------>ZmHOX2a(1)<---------DEAR3(1)  ---------->ID1  --------->WOX13(1)           ------>ZmHOX2a(1) ---------GLK1(2)     <---------TOE1(2) <-----------RAV1(1) <---------ATHB12        ---------->ID1 --------At4g35610<-------TEIL<----------DOF2     <-----------HVH21   ----------->RAV1(1)   <--------   cagattcctcatgggacaaattcgtaggtgcccttttgaattctgtcgtcttcgtcgctgcaatcactgttgcaacatttgttctcgtccttctctttta  12757200                                                                           --------->TOE2(3)                                                                         --------->ARR11(3)                                               ---------->ID1            <---------ARR11(3)          <---------AHL20(2)                   <-----------------AGL1   <---------GLK1(1)      ----------->GT1                     <----------DOF2<---------ZAT18--------->GLK1(1)   <---------MYB52(1)            <---------GLK1(1) <----------DOF2 ----------->GT1       <---------WOX13(1) ----CCA1(2)              <---------REM1(2)   <-----------GT1     --------->ALFIN1<---------YAB1 --DOF2----------->GT1--------->GLK1(2) <---------At4g35610     <---------ANAC46  <---------AHL20(2)   tctccgatgtgttaaattcttgaaattctacatgggtttctcagcttttatcgttttagggaacttaggtggagaaatcttagttttattgatagatcga  12757300  Previous    Next  AGI:  At2g29890.1    Description:  VLN1 (VILLIN 1); actin binding. Identical to Villin-1 (VLN1) [Arabidopsis Thaliana] (GB:O81643;GB:O82367;GB:Q9SIK8); similar to villin, putative [Arabidopsis thaliana] (TAIR:AT5G57320.1); similar to VLN4 (ARABIDOPSIS THALIANA VILLIN 4), actin binding [Arabidopsis thaliana] (TAIR:AT4G30160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21469.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61893.1); similar to actin filament bundling protein P-115-ABP [Lilium longiflorum] (GB:BAC77209.1); contains InterPro domain Gelsolin; (InterPro:IPR007122); contains InterPro domain Gelsolin region (InterPro:IPR007123); contains I Range:  from: 12751227    to: 12756673    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g29900.1    Description:  presenilin family protein. Identical to Presenilin-like protein At2g29900 [Arabidopsis Thaliana] (GB:Q9SIK7;GB:Q0IGK6); similar to presenilin family protein [Arabidopsis thaliana] (TAIR:AT1G08700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64430.1); contains InterPro domain Peptidase A22A, presenilin; (InterPro:IPR001108); contains InterPro domain Peptidase A22, presenilin signal peptide; (InterPro:IPR006639) Range:  from: 12756823    to: 12758202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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