Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->ANAC58                  --------->ANAC58     --------->ALFIN1                  --------->ANAC46   --------->ALFIN1                 ------->MYC3      <---------ANAC55(1)                 <-------MYC3      <---------ANAC58                --------->At4g35610<---------ANAC58                <---------At4g35610<---------ANAC46         <---------ARR11(3)      <---------At5g28300          <---------ZAT6                 <-------     ---------->DOF2            <-----------GT1      --------->AHL20(2)            <-------MYC3     -    ------>ZmHOX2a(1)     <---------YAB1         --------->AHL20(2)                ------->MYC3<----- ----GT1 --------->ARR11(3)--------->YAB1        --------->YAB1                <-------TEIL  <-------   aatgtcctaaagatagtcacatgccactatcattttgccgtgtgggactaataaaaaaaatgtagtgttatagaatacacatacatgtgtcttcacttta  12750800                                                             <----------DOF2                                                        ------->TEIL                <---------YAB1                     <---------ICU4          --------->AHL20(2)                       --------->YAB1              --------->CCA1(2)          <---------AHL20(2)                      --------->ICU4              <---------ARR11(3)     <-------TEIL--------->ATHB12                 <---------ATHB51       --------->YAB1 ---DOF2 --------->AHL20(2)     <----------DOF2   <---------ATHB12       --------->AHL20(2) -------->AHL20(2) <---------WOX13(1)<----------DOF2 <---------YAB1     <---------YAB1      <-------- ------GT1<---------AHL20(1) <-----------GT1    --------->WOX13(1)      <---------ATHB51 <-----------GT1 --DAG2--------->TOE2(3) <---------AHL20(2)   <---------ATHB12          --------->ICU4<----------DOF2   cattatatacattaaattttgattgattttttttcttttcttttctaaatcaattatgaatttctttgaatgcaattatagatataaacttttactttct  12750900                                                                            <---------AHL20(2)                                                                          --------->CCA1(2)      <----------DOF2                                                   <<<<<<<<<RAP2.2          ---- --------->AHL20(2)                                              ------->TEIL                 ------- --------->YAB1      --------->YAB1        ----------------->AGL1<-------TEIL         <---------AHL20(2) --DOF2         <---------ARR11(3)    --------->TOE2(3)      <---------------AtSPL8  --------->AHL20(2)   caataaaactttagagaagacattaatagaagaagttttatcttagccaaataagaaaacatatatgtacatttagatataaatctatataatataagat  12751000                                                                     <---------ANAC46                                                                    <------NtERF2                                                                   ------>NtERF2                                                                  <---------DEAR3(1)                                                                  --------->DEAR3(1)                                                              <---------LBD16                                                              <---------At5g28300---------->DOF2 <---    <---------YAB1                                 <---------WRKY18(1)    ---------->DOF2   ---------  --------->YAB1            <---------YAB1<---------ICU4    ----------->HVH21--------->At4g35610 ---- --------->ICU4   --------->YAB1--------->AHL20(2)--------->WRKY38(1)----------->GT1        --------- ----->AHL20(2)  --------->ICU4<---------YAB1     --------->WRKY12<---------ANAC46     ---------->DOF2 ---->GT1 ---------->DOF2 ----------->GT1------->TEIL      <-----------HVH21 <---------At4g35610-----   aaaatgatgaaacaaagaaatgatgagattgtgattatatatgaacatgacattgaccttctgtcacggcgtcgtttaaagctgaaagttaaagaagcaa  12751100                                                                                       <-----------GT1                                                                                   --------->ATHB51                                                                                   <---------ICU4                                                           ------->MYC2            <---------AHL20(2)                                                        <---------ALFIN1           --------->AHL20(2)                                                      --------->TCP15(2)          --------->ICU4                                                      --------->TCP23             <---------YAB1                                                     <---------TCP15(1)         <--------HAHB4                            <----------DOF2          --------->PCF2             <--------ATHB1                         <------NtERF2               <---------TCP20            <---------ICU4                        ------>NtERF2               --------->TCP20             -------->HAHB4                        --------->ZAT18             <---------PCF2              --------->YAB1                        <---------ZAT18            <---------TCP15(2)           --------->ATHB51                       --------->RAP2.6(2)         ----------->HVH21           <---------YAB1 ----------->RAV1(1)   --------->DEAR3(1)          <---------TCP23             <---------ATHB51 ------ARR14(2)     --------->DAG2             <------MYB46(1) <----------DOF2 --------->ICU4 >ANAC58           ---------->DOF2          >>>>>>>>>CBP60g<-------MYC2        --------->AHL20(2) ----->ARR14(2)    --------->DAG2    <----------DOF2--------->TCP15(1)       <---------ICU4 >ANAC58 --------->GLK1(2) <---------DAG2   >>>>>>>>>SARD1 ------->MYC3      --------->YAB1 ---->GLK1(1)     ---------->DOF2---------->ID1<------MYB83<-------MYC3   --------->YAB1          <--   atccaacaaaaattctgacaaaaaggcgcccttttgtttctttgaaatttggtgggacccacatgcttttgcagactaataataattattttcttcatcc  12751200         <---------ALFIN1   <----------DOF2                             <------ZmHOX2a(2)       --------->ANAC58     <---------DAG2    =================================HOX2a_HOX2a       <---------ALFIN1    <---------ANAC58   ------>ZmHOX2a(1)         =============================       --------->ANAC58    <---------ANAC58====================================HOX2a_HOX2a     <---------ALFIN1      *TSS       <---------HSFC1(2)               <---------ARR14(2)     --------->ANAC58  <------------CBF    ------>ZmHOX2a(1)           --------->ARR14(2)           -     --------->ANAC58 --------->ATHB12--------->HSFC1(2)           <------ZmHOX2a(1)                =    <---------ZAT18 <----------DOF2   --------->HSFB2a(1)       <---------ICU4             <--------- -------MYB52(1)   --------->TOE2(3) <-----------ARR10          --------->YAB1            <<<<<<<<<<GT-3b   gtttggcacacacactctcttcctttattgctttttgcgaaactcctcctctctctcacaattgaatcaggacgatccaattgaatcgctatttttcttc  12751300                        --------->ARR14(2)              ------>ZmHOX2a(2)                                        <-----------RAV1(1)        <-- ======HOX2a_HOX2a      <---------ZAT14  --------->YAB1             <----------DOF2   <---------ANAC46 ----->ZmHOX2a(1)       <---------ARR14(2)  <---------ICU4        ------>ZmHOX2a(1)  --------->ATHB12 ====================HOX2a_HOX2a        <-------TEIL         XXXXXXXXXXXXXXXXXXXX>MIR776     <------- --GT1  ----------->RAV1(2)        <-----------GT1         <---------YAB1---------->ID1      --------   tccttcgtatgcctgatccctgtgagtattctgcatttaacattcatcttcacaattgattctaattcctcttttgttgttttcgattgtttggagattt  12751400                                             <---------ANAC46                                           <---------MYB46(3)                            <---------ARR11(3)                                 <-------GAMYB                                           --------->ARR11(3)                                <---------MYB46(3)                                       --------->GLK1(2)                             <---------LBD16 <--------P                                  --------->ARR14(2)                            <-----------RAV1(1)                                          <---------ARR14(2)                            <---------HSFB2a(2)<------MYB46(1)                     <---------WOX13(1)                            --------->HSFB2a(2)<------MYB83                     <---------AHL20(2)  --------->ATHB12         <---------LBD16 --------->MYB55(2)                   --------->AHL20(2) ---------GT1           <----------DOF2   <---------TOE2(3)                     --------->AHL20(1) --ARR11(3)         ---------->ID1        <---------YAB1---------->DOF2        --------->AHL20(2) ->ARR11(3)        <-----------GT1<--------P<-------GAMYB              --------->At5g28300          <   taactgatttgagtttttttttttctctttctgggggttgaattgtggttgggattgggaaagttgttttctcggtgaaaaattaattgaaaatctgaga  12751500                                                                                --------->ATHB12                                                                              <---------TOE2(3)                                                                            <---------AHL20(2)               <---------At4g35610                                         --------->AHL20(2)          ------->MYC2                                                    <----------DOF2          ------->MYC3                                               <------MYB46(1)          <-------MYC2                                               <------MYB83          <-------MYC3                                            <-------GAMYB <---------ICU4    <---------WOX13(1)                    <---------AHL20(2)     --------->MYB52(2)   <---------ANAC58              ---------->DOF2                 <---------MYB46(3)   <---------ANAC58           --------->TOE2(3)                  <-----------RAV1(1)  --------->ATHB12           ----------->GT1                     --------->MYB111(2) ---------WOX13(1)           <---------ANAC55(2)  ----------->GT1--------->MYB55(2)            <-----   agattgattgcatatgcagcaacttaagaaaacgtaaatgcaaatttatctctggtaacaacattgtttgttggtgatttaatgtttgctctctactctt  12751600                   <------MYB83<-----------HVH21                  --------->ANAC58                   ----------->GT1                                --------->ANAC58                   <------MYB46(1)                            --------->ANAC58                  <---------AtMYB61    <---------MYB46(3)     --------->ANAC58                --------->ARR14(2)     <-----------RAV1(1)  ---------->DOF2               <------ZmHOX2a(1)    <-----------RAV1(1) --------->At4g35610      <---------AHL20(2)      --------->ANAC46       <------ZmHOX2a(1)                   --------->ARR11(3) -----DOF2     --------->ATHB12<-----------TGA1    <---------TOE2(3)                 ---------->DOF2   tggtttatgaaattgcaggattggtttattaagcgtcactgttgttggattttgaggaagatgaaagcaaacaatgtctaggctaagtaaagacattgat  12751700  Previous    Next  AGI:  At2g29880.1    Description:  Identical to Uncharacterized protein At2g29880 [Arabidopsis Thaliana] (GB:O82368;GB:Q1PEY9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27260.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74698.1) Range:  from: 12749613    to: 12750826    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g29890.1    Description:  VLN1 (VILLIN 1); actin binding. Identical to Villin-1 (VLN1) [Arabidopsis Thaliana] (GB:O81643;GB:O82367;GB:Q9SIK8); similar to villin, putative [Arabidopsis thaliana] (TAIR:AT5G57320.1); similar to VLN4 (ARABIDOPSIS THALIANA VILLIN 4), actin binding [Arabidopsis thaliana] (TAIR:AT4G30160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21469.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61893.1); similar to actin filament bundling protein P-115-ABP [Lilium longiflorum] (GB:BAC77209.1); contains InterPro domain Gelsolin; (InterPro:IPR007122); contains InterPro domain Gelsolin region (InterPro:IPR007123); contains I Range:  from: 12751227    to: 12756673    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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