Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          ================MYC_MYB                                        --------->bZIP60(2)                                        --------->ANAC46                                        <---------TGA1a                                        --------->TGA1a                                        --------->O2                                 --------->KAN4(1)                          ----------->RAV1(1)    <------MYB83                         ----------->HVH21       <------MYB46(1)                         --------->ANAC58       <---------AtMYB61                         --------->ANAC46      <--------P    --------->AHL20(2)                  --------->ATHB51--------->KAN4(2)          <---------AHL20(2)                 <---------AHL20(2)     <---------O2        <---------AHL20(2)              ------->TEIL                 <---------YAB1  <---------KAN4(1)          --------->AHL20(2)           --------->ANAC55(2)         <---------YAB1  --------->ANAC58     <---------MYB52(1) --------->AHL20(2)      <---------ANAC55(2) ------->GT1  <<<<<<<<<EIN3    <---------GLK1(2)<---------MYB46(3)<-----------GT1   <---------YAB1   agtaatttctcatcaatgtataattgcacgacagattattccacgtctggttggtcttggaataaaattaactatgggttttatttatgaaacgtatcac  12749200                                             <----------DOF2                                        <---------ANAC58                                        <---------ANAC58                                     --------->ARR14(2)                                     ------->TEIL                                     <---------ARR14(2)                                    <---------CCA1(2)                                  --------->ANAC55(2)                                  --------->ANAC55(1)                                  <---------ANAC55(2)                                        --------                                  --------->ANAC58  --------->AHL20(2)                       --------                                  --------->ANAC58  <---------AHL20(2)            <---------YAB1                                  --------->ANAC46 <---------AHL20(2)            --------->KAN4(2)                        --------->AHL20(2) --------->ZAT14                      --------->KAN4(1)                        <---------AHL20(1) <---------ZAT18                      <---------KAN4(1)                        --------->AHL20(1) <---------ZAT14              --------->ANAC58     <-------                     ----------------------->TaNAC69(2)<-----------GT1  --------->ANAC58    ---------            <---------PCF5      <---------AtLEC2   --------->AHL20(2)   --------->ANAC46    <-------- --------------->AGL15  <---------AHL20(2) <------------------------ANAC81    <---------GLK1(2) <---------------AGL15 --------->AHL20(2)--------->LBD16              <-----------GT1<----------DOF2   ttgctcaaaataggggacctcaaaattttattttgcacgtatccgtgctctaattttattccacttctaatttcacgacagattattctttgtggatatg  12749300                                                                           ----------->GT1                                                                           --------->YAB1                                                                  <------------CBF                                                                 --------->ATHB51                                                                 --------->ATHB12                                                                 <---------ICU4                    -- ------>ZmHOX2a(1)                                               -------->ATHB1                   <-- ->CCA1(2)                                                      <---------ATHB51                <---- ->GLK1(1)                     <---------GLK1(2)                <---------AHL20(2)        --------->DAG2 --GLK1(1)                     <---------ARR11(3)               --------->ICU4           ---------->DOF2 >ARR14(2)         <-----------RAV1(1)    <----------DOF2       --------->AHL20(2)  <---------------AGL15 -ARR14(2)     --------->AHL20(2)     <---------GLK1(2)      --------->AHL20(2)     --------------->AGL15   ctcctattttgttagaaaaaaatgttgttgctagattttagatacttttgaaatgttgttagataaattattgtctatcgtaaaatcccaaaaaagtagt  12749400                                --------->ICU4                 ===============HOX2a_HOX2a                                <---------YAB1                <---------ARR11(3)                   --                      <---------AHL20(2)                      --------->ARR11(3)                   <-                      <---------AHL20(1)                     --------->YAB1                     -----                     --------->YAB1               <----------ID1                                <---- ------->AHL20(2)   <---------AHL20(2)            ----------->GT1      ------>ZmHOX2a(1)     -------- -------YAB1       --------->AHL20(2) <-----------GT1     ---------->DOF2---------->DOF2     -------- -----ZAT6      ------>ZmHOX2a(1)<---------ICU4 ---------->DOF2<------ZmHOX2a(2)             --------   attatatacttacttctcctatataatatttgtgatcatttcacttctcaaaaagaaaaacaaagatcatctcctaaaaccagtttgaagaaaaaccata  12749500         <---------TOE1(2)         <---------TOE2(2)    ------>ZmHOX2a(1) ------->YAB1                     --------->YAB1                              <----------DOF2 --------ICU4                    <---------AHL20(2)                       --------->GLK1(1) ---->YAB1                      --------->AHL20(2)                        <---------GLK1(1)         < -----ICU4                   --------->AHL20(2)------------>CBF          <---------ARR11(3)    <----- ->YAB1 <---------MYB52(1) --------->AHL20(2)--------->ANAC46            --------->ARR11(3) <-------- ->TOE2(3)                 <-----------TBP --------->ZAT6          <---------YAB1           <-------- ->TOE1(3)              ------->TEIL       --------->ANAC46   ------>ZmHOX2a(2)         <---------AHL20(2)   atcatccttcgtaagtttctcgtatgcatttttatataataatctacactacaatttctcttgatccatatgaaagatttctttatgtttttattttctt  12749600                                              <----------ID1                                     ========================bZIP_DOF                                     --------->bZIP60(2)                                     <---------bZIP60(1)                                     ==================bZIP_DOF                                     --------->ANAC58                                     ----------->GT1                                     ============================bZIP_DOF                                     <---------TGA1a                                     ------------------------>ANAC81                                     --------->TGA1a                               <------ZmHOX2a(1)                              --------->At4g35610                            <-----------RAV1(2)                                --------->AGP1                        <-----------RAV1(2) ---------->DOF2                    --------->ARR11(3)                       <xxxxxxxxxxxxxxxxsmallRNA(i)                           --------->At4g35610   ============================================bZIP_DOF                       <---------At4g35610   <----------DOF2   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <---------ARR14(2) -----------GT1    <------ZmHOX2a(1) --------->ANAC58           --------->ARR14(2) -----DOF2        --------->At4g35610--------->O2              <---------CCA1(2)<------ZmHOX2a(2) <-- -AHL20(2)      <-----------RAV1(2)  <---------O2     ---------->DOF2     <-----------HVH21       --- ---GT1         --------->YAB1<---------At4g35610 ---------->DOF2   <-----------HVH21       <--------   tttttctttagaatggaatcaggagaccaggcaggagagacgtcaaaaaagaaaaagaaaggcccatatatgtcatggtcagatcaagaatgttatgagt  12749700                                        <---------------AGL15                                       <-----------------AGL3                                       <-----------------AGL1                                     ----------->HVH21                                   <---------ANAC58                                   <---------ANAC46                                   <---------bZIP60(2)                                   <---------bZIP60(1)                                   --------->bZIP60(1)                                   <---------TGA1a                                   --------->TGA1a                                   <---------ANAC58                                   <---------O2                                   --------->O2                                  <------NtERF2                                <---------DEAR3(1)      --------->ANAC58 -------DOF5.7(2)              <---------ANAC58         --------->ANAC58 ------>MYB52(1)               <---------ANAC58         --------->ANAC46  ----------->GT1           - -YAB1                        --------->ZAT2  <---------------AtSPL8    ----------->GT1          ----   taacggctatattagttgatgctatcaaacgaggctggcgtgacaaaaatggtaccataagcaaaactacggtagagagaaaaatactacctcttctaaa  12749800                                                                               --------->ZAT18                                                                               --------->ZAT14                                                                               <---------ZAT18                                                                               <---------ZAT14                                                                            <---------At4g35610          ----------->GT1                                                   --------->At4g35610      --------->AHL20(2)           <---------AHL20(2)            <---------ZAT14<---------ALFIN1      <---------AHL20(2)       --------->AHL20(2)                --------->ARR14(2)<---------DAG2   ----------->GT1             <---------AHL20(2)                <---------ARR14(2)<----------DOF2  ----------->GT1             --------->AHL20(2)          --------->DAG2   <-----------RAV1(1) --------->DOF2               <---------AHL20(1)         ---------->DOF2--------->REM1(2) ----->AHL20(2)               <---------AHL20(2)      --------->YAB1 <---------ANAC46             <--   taaaaagtttaaatgtaataagacttacacaaattatttaagtcgaatgaagtctatgaaaaaggagtattctgtgtatgctgcacttttttggtttagt  12749900                                                      <---------At4g35610                                                      --------->At4g35610                                                   --------->ALFIN1                                                 <---------ANAC46                                                 --------->ALFIN1                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                          <---------At4g35610                                        <---------HSFB2a(2)                                        <-----------RAV1(2)                                     -----                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                    <------               ------>ZmHOX2a(2)    <---------At4g35610  <------NtERF2<XXXXXXXXXXXXXXXXXXXXMIR399B/C              <------ZmHOX2a(2)     --------->At4g35610  <---------At4g35610  <----------DOF2 -------             --------->ARR14(2)  <---------At5g28300--------->ZAT18  --------->At5g28300     --------             <---------ARR14(2) <-----------GT1<---------ANAC46     ----------->GT1          -------- ---------------AGL2          xxxxxxxxxxxxxxxx>smallRNA(i)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)-----   tctggttttggatgggatcccatcacaaaacaatttacagctccagatgatgtgtgggcagcctatttgatggtaactctcttttggttaacttcaccaa  12750000                                          --------->ARR11(3)                                          --------->AHL20(1)                                          <---------AHL20(1)                                          <---------ARR11(3)                                          <---------ICU4                                        <---------AHL20(2)    <---------CCA1(1)                   <---------AHL20(1)    <---------RVE1(1)                  --------->YAB1                    <-------MYC3          <-----   --------->ARR11(3)                 <---------AHL20(2)           <---------ICU4              ------   <---------ARR11(3)                --------->AHL20(2)            --------->YAB1              <-----  <<<<<<<<<RAP2.2    --------->YAB1--------->AHL20(1)             <---------YAB1               <----- ->MYB83         --------->ATHB51  <---------AHL20(1)           --------->YAB1                 ------ ---------AGL15  --------->ATHB12 --------->AHL20(2)           <---------ATHB12     <---------ALFIN1 -------->AGL15  <---------ICU4<---------ICU4              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->AGL2 <---------YAB1 <---------AHL20(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <----- --------->AGL3 --------->ICU4--------->AHL20(2) <---------LBD16<---------ICU4  --------->MYB46(3) ->MYB46(1)   --------->YAB1  <---------ATHB12   <-----------RAV1(2)     ------->MYC3  <----------DOF2   atttagatattttctgtcattattgataactaataaatatataatattttctcaggggcatccaaatcatcatcacatgcgaaccagcactttcgaagat  12750100  Previous    Next  AGI:  At2g29880.1    Description:  Identical to Uncharacterized protein At2g29880 [Arabidopsis Thaliana] (GB:O82368;GB:Q1PEY9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27260.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74698.1) Range:  from: 12749613    to: 12750826    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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