Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------ANAC58                                     --------->GLK1(2)                               <---------ANAC46  <---------ANAC58            --------->MYB46(3)                         <---------TOE2(3)  <---------AHL20(2)    --------->ANAC55(2)            ----                        <-----------GT1     --------->AHL20(2)    <---------ANAC55(2)            <--- ------GLK1(2)       <---------ICU4 <---------GLK1(2)<---------ZAT6        <-----------GT1    <------ -->YAB1   <---------ZAT6---------->ID1    --------->AHL20(2)   --------->ICU4         --------->AHL20(2)   aatttcaattctagtgttattcattttgacgttttgtagattctattaaattcttgtgttattgaaataagtatttgtaaccattctcttaaaatacttt  12747900                                                                                    <---------AHL20(2)                                                                                 <---------ICU4                                                                                --------->ICU4     <-      <---------ZAT6                   <---------AHL20(2)               <---------AHL20(2)   -------- ----->AHL20(2)                        --------->AHL20(2)              --------->AHL20(2)    -------- ------AHL20(2)                       --------->AHL20(2)       <---------ANAC55(2) <---------YAB1 --- ----DOF2                  --------->TOE2(3)    <---------ZAT6 ----------->GT1  <---------YAB1    <--   taattctagtgttattcaacttgttgaattcttaattctattaaattcaagtgttattcaatgttatgtaaaattttatgacattattatttgacaagaa  12748000                                                                                           ----------                                                                                    ------->TEIL                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                --------->SPL7                                   --------->YAB1                             --------->TOE1(2)                                   <---------ICU4                             <---------SPL7                                  <---------ATHB51                           <---------ANAC58  <-----                                  <---------ATHB12                           <---------ANAC58  ------ --------AHL20(2)                 --------->ICU4     --------->ATHB12       --------------->AtSPL8 ->ANAC58     <---------ZAT6    --------->WOX13(1)  <---------YAB1          <---------------AtSPL8 ->ANAC58     ----------->GT1 ------------>CBF      --------->ICU4          --------------->AtSPL3 ------>AHL20(2)    <---------ARR11(3)        <---------TOE2(3)             <---------------AtSPL3 << -------AHL20(2)    --------->ARR11(3)    <----------DOF2                  <------ZmHOX2a(1)---------   tttaatagaaaaactagtgtaaaatctatagaaccaattatgagcttttatgttatgatttcgatggaaaacaaataggacgtacgaacttcaaaaagtt  12748100                                                                                     <<<<<<<GRF7                                                                                   ------>ZmHOX2a(1)                                                                                   ----------->HVH21                                                                                 --------->At4g35610                                                                            --------->ANAC58                                                                            <---------O2                                                                            --------->ANAC55(2)                                                      --------->AtMYB61     --------->ANAC58                                                      ================================MYC_MYB                                            --------->HSFB2a(2)----------------------->TaNAC69(2)                                           ------>ZmHOX2a(2)  <---------bZIP60(1)----------->RAV1(2)                                      <---------KAN4(2)     <---------ZAT14 --------->O2                                      <---------WOX13(1)    --------->ZAT14 --------->TGA1a                                 <---------ANAC46     ----------->RAV1(1)   --------->ANAC46    <---------YAB1             --------->MYB52(1)     ------->GAMYB         <---------TGA1a >DOF2                        ----------->HVH21     ==================================MYC_MYB ----ARR11(3)               <---------At4g35610     -------->P--------->bZIP60(1)<---------At4g35610 --->ARR11(3)               --------->At4g35610    --------->WOX13(1)   <-----------HVH21 <<<<<<<TBF1                ----------->RAV1(2) --------->GLK1(2)      ===============bZIP_DOF      - >DAG2                <----------DOF2<------------CBF--------->MYB46(3)<----------DOF2      <--------   cttcttctcattagccgagtctctctttccatctgacgggattgatcgagaatcaaccacagtgttgtcatgactttcacgtctcctgacagagaaggaa  12748200                                                                          --------->ZAT18                                                                          <---------ZAT14                                ------->MYC2                           <---------ANAC58                                ------->MYC3                           <---------ANAC46                        --------->TOE2(3)                              --------->ALFIN1                      -------->P<-------MYC2                           <---------ANAC58                      ------->TEIL                                   <---------ANAC46         --------->ANAC58       <-------MYC3                       --------->YAB1                  <-         --------->ANAC58      <----------TaMYB80                 --------->ICU4--------->ANAC58  ---         --------->ANAC46     ---------->TaMYB80      <---------AHL20(2)  --------->At4g35610     <-- -------->MYB52(1) <------ZmHOX2a(2)  --------->ARR14(2)          <---------ATHB12 --------->CCA1(2) -------AtSPL8<---------At4g35610     <---------ARR14(2)      ------------>CBF  --------->ANAC58  ===   cataactgttcaagtcatcggatcaaccttggcatatgcgactctgcgtcttctgtttaatctgaacaatgatgtgtgcagcaagaaacacgatgtcttc  12748300                                                                                             ------->GAMYB                                                                                             --------                                                                                            <--------                                                                                         --------->MYB46(3)                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                                                     <-----------HVH21                                                                                     <---------RAP2.6(3)                                                                                     <-----------TGA1                                                                                    --------->bZIP60(1)                         ------>ZmHOX2a(2)                                          <---------ANAC58                       --------->ARR11(3)          <--------HAHB4                   <---------bZIP60(1)            ====================HOX2a_HOX2a        --------->YAB1                   --------->RAP2.3(3)            ------>ZmHOX2a(1)  <---------ATHB12    --------->ATHB12                 --------->ATERF1(2)       <---------At4g35610    --------->ANAC58     <---------ICU4                   <---------ATERF1(2)       --------->At4g35610    --------->ANAC58    --------->ICU4               <---------DEAR3(2)   <-----------HVH21   <---------ARR11(3)      <-------TEIL                   <---------DEAR3(1) --------LBD16 --------->HSFB2a(2)  --------->YAB1<---------YAB1    <---------YAB1  <---------ANAC58 --->ZmHOX2a(1)<---------HSFB2a(2)  <---------ANAC58    <---------LBD16 --------->MYB52(2)  --------- -------LBD16----------->RAV1(2)    <---------ANAC58   --------->MYB52(1)    ----------->RAV1(2) ===============================HOX2a_HOX2a  <---------GLK1(1)   ------>ZmHOX2a(1)<---------ZAT18   ctcggggtcatctccttctgggtctgatcttcaagcattcgtgatggagttcatcattaccggcttcctcatgttagtcgtctgtgccgtcacaaccacc  12748400                      ------->GAMYB                     --------->MYB46(3)                    --------->ANAC58                    --------->ANAC58                         --------->TOE1(3)                   ------->GAMYB                             --------->YAB1                  <---------MYB55(2)         --------->ARR14(2)                  <---------MYB111(2)        <---------ARR14(2)             <---------ATHB12                  --------->MYB46(3)         <---------ARR11(3)           --------->WOX13(1)     <-----------RAV1(1)                    <------ZmHOX2a(1)--------->TOE2(3) ->AtMYB61    =====================================HOX2a_HOX2a     --------->TOE2(3) -MYB55(2)    <------ZmHOX2a(2)    --------->ICU4 <---------AHL20(2)    <---------YAB1     <---------ARR14(2) >MYB46(3)<------NtERF2            <---------YAB1 --------->AHL20(2)   <-----------GT1    <------ZmHOX2a(1)   aagagaactgttggcgatcaacaaccaaaaacacttcatgatcagaggatatataaatttcaatcttaacatttatcaatcttgcagacagaggaactag  12748500                                                 ----------->ARR10                   ------->GAMYB               <--------P                   --------->ANAC46          <---------ANAC46                  <------------AtMYB77       <---------ANAC58                  --------->MYB46(3)         <------MYB46(1)       --------->YAB1                        <---------ANAC58       --------->ATHB12                      <------MYB83       -------->ATHB1                       --------->MYB59       <---------ICU4                       <---------MYB46(3)      <---------ATHB12                  <-----------RAV1(1)--------->ARR14(2)      <---------YAB1<-----------TGA1  --------------->AGL15<---------ARR14(2)      --------->ICU4<-----------HVH21 <----------DOF2     <---------GLK1(1)                    ------   ------------>ATHB5               <---------YAB1        --------->GLK1(1)   ----------->GT1  ------   aggggctaatcattggggcaaccgtcacactgaatgttatctttgttgggtaagtttcgcatttccccctcaatctctgcaagttaaaattcttcaatgg  12748600       <-----------RAV1(1)     <----------DOF2  <---------ARR11(3)  --------->ARR11(3)                                                                      --------->ARR14(2)  --------->GLK1(2)                                                        --------->ANAC58 <---------GLK1(2)                                                     ------->TEIL       <---------ARR14(2) ----->GT1            <----------ID1                       <------ZmHOX2a(1)             <------ZmHOX2a(1) --->YAB1       --------->MYB46(3) <----------DOF2      <-----------RAV1(2)--------->ANAC58    <-----   taagaatctttgtggctaaccaatgggacaatccaaactttcattttacagagaggtatcaggagcatcgatgaatccagcaagaagcataggacctgca  12748700                                                          <---------CCA1(2)                                                         <---------RAP2.6(3)                                                        <---------ANAC46                                      ------>NtERF2     <---------ANAC58                           --                                      <---------ATERF1(1)------>NtERF2                             --         ----------->GT1            <---------ANAC58    <---------ANAC58                           --   --------->ALFIN1                 <---------ANAC58   <------NtERF2                              --- <-----------RAV1(1)        --------->CCA1(2)          --------->ATERF1(1)            <---------DOF5.7(2) <---------ANAC46           <---------GLK1(1)         <---------ZAT18                <-----------GT1 <---------ANAC58    --------->ARR14(2)       <---------ALFIN1                --------->AHL20(2) <--- <---------ANAC58    <---------ARR14(2)     ----------->RAV1(1)            --------->YAB1        <--- ----ALFIN1    ---------->DOF2     --------->ZAT2     ------>NtERF2       <-------TEIL<---------At5g28300   cttgtgtggggatgttacaaagggatttggatatacttgctggctccaacacttggtgccgtctctcgggccttgattcataaaatgttaccgtcaatac  12748800  Previous    Next  AGI:  At2g29870.1    Description:  major intrinsic family protein / MIP family protein. similar to NIP2,1/NLM4 (NOD26-LIKE INTRINSIC PROTEIN 2,1), lactate transmembrane transporter/ water channel [Arabidopsis thaliana] (TAIR:AT2G34390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48005.1); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 12748269    to: 12748868    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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