Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         ------>ZmHOX2a(1)                     ----------->RAV1(2)                  --------->ZAT2                  --------->At4g35610             <-----------GT1                                              --------->YAB1            --------->WRKY12                                   <---------At4g35610            ----------->HVH21----------->HVH21         <---------TOE1(3) <---------ATHB12            --------->WRKY38(1)                   ----------->GT1      --------->WOX13(1) ---------TOE1(3) <---------At4g35610  <---------AtMYB61       --------->At4g35610 ---------TOE2(3) <---------ZAT2     <----------DOF2   <---------TOE2(3)-------->P    --------->ZAT18   tgaaggtttctcatttgaccagctcctgtgtttgacatgctttggtttcatatggttaatgtttctgctaaatcaaccatgagagatgtgaactatttct  12677900                         <---------ANAC46                        <------NtERF2                      --------->ATERF1(1)                      <---------RAP2.6(2)                     ------>NtERF2                    <---------RAP2.3(3)                    <---------PCF5                 --------->ALFIN1                --------->ALFIN1                                     <-----------GT1   <---------ANAC55(2)<------NtERF2        --------->REM1(1)  ----------->GT1   ---------->DOF2   atatcatgtgtctgtaacgttggggccgcttgtgagcctcttccttcaccattttcagtttgatcagttaataacctcatgtaaaagcagtgagagagag  12678000                                         <-------GAMYB                                    ===========================HOX2a_HOX2a                                    ------>ZmHOX2a(1)                 <---------ANAC46                                  ----------->RAV1(2)              ----------->HVH21                                <---------ARR14(2)         <---------TOE2(2)               <---------ALFIN1 --------->ARR14(2)       <---------SPL7 ----------->GT1              --------->ZAT18  --------->GLK1(1)        ------>ZmHOX2a(2)  ---------->DOF2   <------ZmHOX2a(2)           <---------GLK1(1)<---------YAB1 <----------DOF2 <---------GLK1(1)       <----------DOF2<---------DEAR3(1) <---------TOE1(2) ----------->GT1  -------   aagagatcagagatggcacactgtttcctttggaaatcctgggcgttgttatgtttgatcgtaggctttgtgactggtaaagaaaaaaacagcatgtatg  12678100                                                                                                 <---                                                                               ---------->DOF2  <----                                                                         ----------->GT1    ---------                                                                       ----------->GT1     --------->ALFIN1                                                                     <------------CBF    <---------ANAC58                           <---------TOE1(2)                  <---------At4g35610        <---------ANAC58 >TEIL           --------->MYB52(1)         <---------ARR14(2)--------->At4g35610      <---------At5g28300   ttatgttcaaaatactaaaaaacgactcgtagtttaatactcatccgataccgtcgtcttcttcatctgaaaattgagaaaaaaagtcttaccgtgtcga  12678200                                                                                             --------                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                                                                                      <---------GLK1(2)                                                                                     <------NtERF2                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                           --------->LBD16   <-------                             ----------->ARR10                           <---------HSFB2a(2) <-------                  --------->ANAC58                                       --------->HSFB2a(2) ------->TEIL     --------->ARR14(2)   <---------ANAC58                        --------->YAB1   <---------ANAC46 - ------WOX13(1)   --------->ANAC58                        <-----------TGA1--------->LBD16    -------- --------CBF      --------->ANAC46   ------------>CBF  <-----------GT1  <---------LBD16     <-------- >REM1(2) ------------>CBF<---------ANAC58      --------->TOE2(3)<---------YAB1   <---------LBD16   <   ttgctagaatactccaatccaagcccttgcttagtttctctcaatctaatccctaattttcgtcactataattctcccgaaaatggcggattccgaatct  12678300        --------->ANAC58        --------->ANAC58        <---------MYB52(2)      --------->YAB1   --------->WOX13(1) ->GLK1(2)                                                         <---------WOX13(1) --ARR14(2)                                                      --------->ATHB12 --ARR11(1) --------->ANAC58                                  <---------At4g35610 -------->ARR11(3)                                          <-----------RAV1(2) ->ARR14(2) --------->ANAC58                        --------->GLK1(2) -ARR14(1) --------->SPL7     <-----------GT1     --------->MYB46(3)    ------>ZmHOX2a(2) ---------ARR11(3)      <---------YAB1       --------->TOE2(3)--------->At4g35610        --------->TOE2(3)   aaaatctatcacgaacgacaacgattacaattttgcctcttgcactgcctcaacaatctatttcaggtgattgatccaatttctatttcaatctcaaaat  12678400                                                     <------ZmHOX2a(1)                                       ------>ZmHOX2a(2)     --------->ANAC58                                       =====================HOX2a_HOX2a                                     <---------ARR11(3)      --------->ANAC58          --------->MYB46(3)         --------->ARR11(3) ---------->DOF2    ---------->DOF2    ------>ZmHOX2a(1)        <---------YAB1         <----------ID1     ---------->DOF2             --   ttcatcctccgaatcaccgatttgagagtttttgatagtgatctcgtttgatttaggacaaagacgcattcactaaagaaagcttgaactcaatcgcaga  12678500                                                        --------->ANAC58                                                        --------->ANAC58                                                     ------>ZmHOX2a(1)              --------->TOE1(2)                      ---------->DOF2             ---------->ID1                 <--------P             --------->YAB1                     <---------ANAC58               ----------->GT1  -----            <---------ATHB12                    <---------ANAC58           --------->ATHB12   <------           <---------------------WRI1        <----------DOF2              <---------ATHB12  --------- ------->GLK1(2)------>ZmHOX2a(2)  <---------ALFIN1 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------ANAC46   gaagctcgagaccaatgatccaaacaaagaaacatggacacctctctctttcgtcctcaagcctcaccacaatacaatcactggtaactacgacgtaaac  12678600         <---------At4g35610                                                                <--------    <---------YAB1                                                                          ---------  --------->ATHB12                                                                       <---------RVE1(1)  <---------ICU4                             --------->YAB1                             <---------GLK1(2) --------->ICU4                             <---------YAB1                 ------>ZmHOX2a(2)--------- <---------YAB1                           <---------AtLEC2            <---------WOX13(1)<---------ARR14(2) ---->ANAC55(2)                 --------->ALFIN1            <---------At4g35610         --------->ARR14(2) ---DOF5.7(2)          --------->DAG2<---------ANAC58 --------->ARR14(2) --------->ARR11(3) ========= >DOF5.7(2)          ---------->DOF2 <---------ANAC58 <---------ARR14(2) <---------ARR11(3) <--------   gtgatgattacagctcttgaaggaaaaggcaagagtgttgtttggcatgataagcgtattggagcttcttcgattgatcttgatgatgcagatactttaa  12678700                             --------->CCA1(2)                            --------->ARR11(3)                            <---------ARR14(2)                            --------->ARR11(1)                            <---------ARR11(3)                            --------->ARR14(2)                                         <------MYB46(1)                   <---------------AGL15                      <-------GAMYB            ----------->GT1 --DOF2            ------>ZmHOX2a(1)   <----------DOF2       --------->MYB111(2)       <------MYB83 >TOE2(3)     --------->KAN4(2)    <---------ZAT18           --------->MYB55(2)        <---------ANAC46 ------>AGL15<---------KAN4(1) <---------AtMYB61             <---------MYB46(3)       --------->MYB46(2) ==================================MADS_MADS                <--------P                --------->MYB59 -------AGL15--------->HSFB2a(1)   --------->ZAT18         <-------GAMYB           <---------MYB46(3)   tgggtattgtgttgaatgttcctgttaagagatatggtggactttggagaagtaggcattgggttgttgttagaaaaatcaatggtgtttggtataattt  12678800  Previous    Next  AGI:  At2g29640.1    Description:  JOSL (JOSEPHIN-LIKE PROTEIN). Identical to Josephin-like protein [Arabidopsis Thaliana] (GB:O82391); similar to josephin protein-related [Arabidopsis thaliana] (TAIR:AT1G07300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21500.1); contains InterPro domain Machado-Joseph disease protein MJD (InterPro:IPR006155) Range:  from: 12678283    to: 12680377    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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