Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->ANAC46                                                             --------->ANAC55(2)                                                      <---------YAB1                                                 <--------ATHB1                                                 --------->YAB1                                                 -------->HAHB4                                                 --------->ATHB51                                                 <---------ICU4                                  ----             <---------ARR11(3)                 <---------YAB1                                  -----             --------->ARR11(3)                 <---------ATHB51                                <----      <---------AtLEC2                        --------->YAB1 <---------ANAC58                   -----  <----------DOF2                          --------->YAB1    <---------ANAC55(2) <---------ARR11(3) ------MYB46(3)               <---------GLK1(1) --------->ICU4      ---------->DOF2             <---- ---ANAC58   --------->AHL20(1)           ----------->GT1    <---------ANAC58    --------->ARR11(3) ---ANAC58 ------->TEIL    <---------AHL20(2)<---------YAB1<-----------GT1 ----------->GT1      -----   ggttctttgaatgaatatatcgactgtatttgatttcagttaaactgataataattgtcatttacgtctcaaaagaattgaaatatcatgtctctcaaga  12673700                                                                                      --------->ARR14(2)                                                                         <--------ATHB1                                                                         --------->ATHB51       --------->ANAC55(2)                                               --------->ATHB12        <---  ------->TEIL                                                           <---------ICU4        ------ ----->CCA1(2)                                                          --------->ICU4<---------ARR14(2) ---->ARR11(1)                                                     --------->YAB1----------->RAV1(1) -----ARR11(3)                         <---------ETT(2)            --------->HSFB2a(2)<---------ARR11(3) ---->ARR14(2)               --------->YAB1               <-----------RAV1(1)    --------->MYB52(1) -----ARR14(2)        --------->AHL20(2)       --------->YAB1   <----------DOF2 --------->MYB46(3) ---->ARR11(3)        --------->ATHB51 --------->ZAT18<---------YAB1    <---------YAB1--------->ARR11(3)   tatggacttacatattgttatgcattatttatcaaaatatgtggacaaaacataatatcaatgtcgctttcagaataattgaacaacagatattgagaaa  12673800                                                                                                  ---                                                                                                 <---                                                                                              <------                                                                                              -------        ----------->GT1                                                                       <------       <---------TOE1(3)                                                                      =======       <---------TOE2(3)                                                           <---------TOE1(3)       <---------YAB1                                                 ----------->GT1      <---------AHL20(2)    <---------YAB1                                ------->GAMYB       --------->YAB1       <---------   <---------AHL20(2)            <---------ARR11(3)        <-----------GT1         <---------TOE2(3) ------ATHB12         <---------YAB1             --------->ZAT6   <---------YAB1<---------ATHB12 <--- --->GLK1(1)        --------->YAB1             <-----------GT1  <<<<<<<<<<<<<<<<<LFY----------->GT1   tcaatttttatggttatatcaattgtcattgccaacatctattacatagtaacagtccaatttacattacaatggtaattcaatgaaggtaatttacttt  12673900                                            --------->YAB1                                            --------->TOE2(3)                                         <---------CCA1(2)                                       --------->TOE2(3)                                       <---------MYB59                                       <---------DAG2                                       --------->TOE1(3)                                     ------->TEIL                                  --------->ANAC58            =======================================                                  --------->ANAC46            ------->GAMYB                                  --------->ANAC55(2)        --------->MYB46(3)                                  ====================================MYC_MYB                                  --------->ANAC58          --------->At4g35610 ------>ATHB12                    <---------ANAC55(2)      --------->MYB52(1) ------YAB1                       --------->TGA1a --------->ARR14(2)                             <--- ---DAG2                         --------------->AtSPL3   <---------WRKY12                 ---------- -------->AGL15                ------>ZmHOX2a(1)  <---------ARR11(3)                       ========== ----DOF2                   ------>ZmHOX2a(1)     --------->ARR11(3)                --------->ARR11(3) ===========================================bZIP_DOF  ------>ZmHOX2a(1)             <---------ARR11(3) --GT1               ----------------------->TaNAC69(2)   <---------WRKY38(1)      --------->RVE1(1) ------AHL20(2) --------->DEAR3(2)<---------TGA1a <---------ARR14(2)               --------->CCA1(1)   ttattggtttactcgtgaaacgacgttctcctcctcacgtaccttatcttaatatcctgatcaacggacaccaattttcgacaaaatatctgagaaagag  12674000         --------->ANAC58         --------->ANAC58      <---------At4g35610    <-----------bZIP910(2)   --------->TGA2(2)  <-----------TGA1  <-----------HVH21 --------->TGA1a --------->bZIP60(2) --------->O2 --------->ANAC58 <---------O2<----------DOF2                                      <---------ANAC58 <---------TGA1a                                                  <---------MYB46(3) <---------ANAC55(2)                                              <---------ANAC58 --------->ANAC55(1)                                              --------->MYB52(2) --------->ANAC58                                                <-------TEIL --------->ANAC46                     ----------->HVH21          --------------->AtSPL8 --------->ANAC55(2)                 --------->At5g28300       *TSS     <----------DOF2 =======================bZIP_DOF    ----------->GT1           <---------HSFC1(2) =======================bZIP_DOF    <---------ANAC58          <---------HSFB2a(1) ==========MYC_MYB            XXXXXXXXXXXXXXXXXXXX>MIR170     --------->HSFB2a(1) ---ZmHOX2a(1)     <---------DAG2   <---------ANAC58          --------->HSFC1(2)          <---------ATHB12 >DOF2--------->At4g35610  <------NtERF2------------>CBF    <------ZmHOX2a(1)     <------ZmHOX2a(1) ==========bZIP_DOF<----------DOF2 <---------DEAR3(1)    <-----------RAV1(2)  ---------->DOF2   gacacgtcagcaagcctttcgctttaggctgcattgggccgtgacaatattcagacgattcaggaggttcgttccttttttaaaggaccctaatcactct  12674100                                                                                   <---------HSFC1(2)                                                                                   --------->HSFB2a(1)                                                                                   --------->HSFC1(2)                                                                                ---------->DOF2                                                                             <------ZmHOX2a(2)                                                                             ===================HOX2a_HOX2a                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                            <-------TEIL                                    --------->AGP1         <-                     --------->ZAT18                                       --------->At4g35610 <-----                     <---------ZAT18                                    <------ZmHOX2a(2)      ------                    --------->ALFIN1                                    ========================HOX2a_HOX2a                   <---------ZAT18        --------->ANAC58             <---------ARR11(3)     <------                   --------->ZAT14        --------->ANAC58             <---------AGP1    ------>ZmHOX2a(1)   gagtaccactgactcactcagtgtgcgcgattcatttcaaaaacgagccagcctcttcttccttcgtctactagatcagatccaaagcttcctcttccag  12674200                                                                                   ------>NtERF2                                                                                   --------->LBD16                                                                                  <---------DEAR3(1)      --------->TOE2(3)                                                          <---------LBD16   --------->ARR14(2)                                                     --------->ARR11(3)   <---------ARR14(2)                                                     --------->ARR14(2) ------TEIL                <---------AtLEC2                               <---------ARR11(3) ----TOE1(2)              <-------TEIL                  <---------YAB1    <---------GLK1(2) --->LBD16 <---------GLK1(1)            --------->MYB46(3)                <---------ARR14(2) -----RAV1(2)         ------->TEIL    ----------->RAV1(1)            <---------ANAC46     --------->GLK1(2)   gttcgaatccttgatttctccatgaatgtgcatggtagtccaacaattgtcgatgtttttgatagagagttttgtagattttctccggcgaaattccgat  12674300                         <---------DAG2    <---------ANAC58                         <----------DOF2   <---------ANAC58                      ------->TEIL   >>>>>>>>>ARR2                 <---------AtLEC2    >>>>>>>>>ARR1                    ---------->ID1                <-------TEIL       <---------YAB1                   <-----------RAV1(1)             <---------ANAC46      <---------TOE1(3)    --------->KAN4(1)         --------->AHL20(2)        <---------TOE2(3)<-------TEIL  <----------DOF2   ttgttcttcaatattatgtgcatgaaactttttttttaagattgtgcgtttagatgcaatattcgactctttgttgttctcatgctcgtcgatttcgatg  12674400                                                                                         ------->TEIL                                                                                       --------->ZAT14                                                                                       <---------ZAT14                                                                                     --------------->AtSPL8                                     --------->ATHB12                             --------->ZAT18                                 --------->ATHB12                                 <---------ZAT18                                <---------YAB1         <---------MYB52(1) --------->At4g35610                     <---------ARR14(2)              <---------ANAC58     <---------At4g35610                     --------->ARR14(2)      --------->YAB1      --------->ZAT2   --------->ZAT14                  ------>ZmHOX2a(2)<---------WOX13(1)<---------ANAC58   <---------RAP2.6(2)--------->TOE2(3)            --------------------->WRI1 <---------WOX13(1)        <---------ZAT2   <---------ZAT14     <---------MYB52(1)   <---------ARR14(2)<-------TEIL         <---------At4g35610 --------->ANAC46   tgtttctgttaatccattgatcgtatcggaaactgtgattgattgattcatattttcgtttgtctccagctatggctgcttcagtacactgtaccttgat  12674500                                       <---------HSFC1(2)                                       --------->HSFC1(2)                                       <---------HSFB2a(1)            --------->MYB46(3)         --------->HSFB2a(1)            --------->REM1(1)         --------->ARR14(2)          ----------->RAV1(1)       <------NtERF2                 --------->ARR14(2)       --------->ANAC58            --------->RAP2.6(2)            <---------ARR14(2)       <---------At4g35610       --------->ANAC58           <---------------------WRI1  <---------LBD16           --------->At4g35610    <---------SPL7          <---------ZAT2                   <---------ANAC46           <---------At4g35610   <---------ANAC46         --------->ZAT2                   ----------->RAV1(2)     <---------At4g35610 <-----------HVH21 --------->YAB1------>NtERF2        <----------DOF2                <---------ZAT2   gtccgtcgtatgcaacaacaagaatcactctgctcggccgaaacttccaaactcgtctttgttacctggattcgatgttgttgttcaagctgctgctact  12674600  Previous    Next  AGI:  At2g29628.1    Description:  unknown protein Range:  from: 12673909    to: 12674034    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g29630.1    Description:  thiamine biosynthesis family protein / thiC family protein. similar to putative thiamin biosynthesis protein [Oryza sativa] (GB:AAK26130.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96438.1); similar to putative thiamine biosythesis protein ThiC [Poa secunda] (GB:AAG49550.1); contains InterPro domain Thiamine biosynthesis protein ThiC; (InterPro:IPR002817) Range:  from: 12674063    to: 12677016    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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