Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------YAB1 ----------DOF2 ---->ZmHOX2a(2) ----ZmHOX2a(2) -------RVE1(1) ------ARR14(3) ----->GLK1(2) ------ARR11(3)                                                          <------MYB46(1) ----->ARR11(3)                           ---------->DOF2                <------MYB83 ----->ARR14(2)                        --------->YAB1       --------->RAP2.6(3) ------ARR14(2)                      <-----------TBP       --------->MYB52(1) --------ARR10                    <-------TEIL             <-----------GT1 ----->ARR14(3)              --------->ALFIN1        ----------->GT1     ----------->GT1 --ZmHOX2a(1) *TSS          <------ZmHOX2a(1)  ---------->DOF2          --------->MYB59   --------->DEAR3(2)   atcttttgttttatgagagagagaagaagaggagggtccatttataaagaaaaggaggttttaacggctaatatttggtaattcgaaatcgaatcgacgg  12653200                         <------NtERF2                     --------->ZAT2              ---------->DOF2           <---------ANAC55(2)           --------->ANAC46                                       ---------->DOF2           --------->ANAC55(2)                            ----------->GT1                <---------AHL20(2)           --------->ANAC55(1)                          <---------ANAC58                 --------->AHL20(2)           --------->bZIP60(2)     <------NtERF2        <---------ANAC46           <---------ANAC58           ----------->GT1        ----------->GT1       <---------ANAC58           ----------->GT1<--           --------->ANAC58      --------->ALFIN1  --------->MYB52(1)              <---------ANAC58<-           --------->O2--------->ALFIN1           <---------AHL20(2)               <---------ANAC46<-           --------->ANAC58   <---------MYB46(3) --------->AHL20(2)                <---------ANAC55(2)   tttagataatgccacgtaaatcgaggtggcaacgggtggcaaaattcaaaaattaatggctcgtgataaaaagtttttttgaatttcgtaaaaaaatatg  12653300                                                                  <----------DOF2                                                                  <---------DAG2                                                              ------->MYC3                                                              <-------MYC3                                                              ------->PIF4                                                              <-------MYC2                                                              ------->MYC2                                                              ------->MYC4                                                              <-------MYC4                                                              ------->PIF5                                                              <-------PIF5                                                              <-------PIF4                                                             ================bZIP_DOF         -------                                                             ================bZIP_DOF         -------                                                             --------->TGA1a                 ------>MYB46(1)                                                             <---------TGA1a                 ------>MYB83                                                             ========================================            <---------ZAT2                                  ------------>OsbHLH66            ========            --------->ZAT2                                  <---------TOE1(2)           --------->ARR14(2)            <---------At4g35610                            <---------ALFIN1             <---------ARR14(2)       ----------->HVH21                                   <------------OsbHLH66  --------->DAG2      <---------WOX13(1)          ----------->GT1        --------->ANAC58        ==================== -----TEIL  --------->At4g35610 <---------ZAT14          --------->ANAC58        ---------->DOF2 --------ANAC58             <------ZmHOX2a(1)        <---------ALFIN1      ----------->GT1   -------- --------ANAC58           <---------TOE2(3)         <---------ZAT18   <---------YAB1  <---------MYB46(3)   ttcgtgtgaatgacagctggattccattaaggagagcagttactaaaacatcgtcgcactcgcacgtgctttatgagagataaaaaagcggttccaacct  12653400        <-------PIF5        ------->MYC2        <-------MYC4        ------->PIF5        ------->MYC3        <-------MYC2        ------->MYC4        <-------MYC3        <-------PIF4       --------->TGA1a       ============================================bZIP_DOF       --------->ANAC55(2)       <---------TGA1a       <---------O2                                                                                --       --------->O2                                                                                <-       <---------ANAC55(2)                                                                   --------       --------->ANAC58                                                                      --------       --------->ANAC58                                                                 --------->ZAT14      <---------TOE1(2)                                                                 --------->ZAT18 -->ZAT2------->PIF4                                                                    <---------ZAT14 ---->RAV1(2)                                                                        <---------bZIP60(2) =MYC_MYB           <---------YAB1                                       ---------->DOF2<---------ZAT18 ================MYC_MYB                        <----------DOF2  <---------AtLEC2    <---------ANAC46 ================bZIP_DOF                  <-----------GT1  <---------ARR14(2)      <---------------- >P  <------------OsbHLH66              <----------DOF2     --------->ARR14(2)     <---------ZAT14 <-   ggcaatcgcacgtgagagacttcttattgggcctaaaatgggcttttactcttttcatttcaaatctgcatgacttaaaacggagtgatgtgcactagca  12653500             --------->ANAC58        --------->ANAC46                                                          ----------->RAV1(2)        --------->ANAC58                           <---------WOX13(1)            ------>NtERF2        --------->ANAC58                          <------------CBF              <---------ARR14(2)       --------->SPL7                            <--------ATHB1             <---------LBD16       --------->RAP2.6(3)                       -------->HAHB4       ----------->RAV1(2)    <-----------RAV1(2)                          --------->ATHB12     ------>ZmHOX2a(2)   ------>ZmHOX2a(1)        ----------->GT1      <---------ICU4      <------ZmHOX2a(2)  --------->TOE2(3)        --------->DAG2       <---------ATHB12    --------->ARR11(3)        <------ ------->ARR14(2) ------->MYC3                  <---------YAB1      <---------ARR14(2)        <------ --------ARR11(3) <-------MYC3                  --------->ICU4 <------------CBF --------->ARR14(2) ->ANAC58    --------->ANAC58                  <---------TOE2(3)    --------->ARR14(2)  <---------LBD16 ->ANAC58 <------NtERF2   ---------->DOF2     --------->YAB1 <---------YAB1------->TEIL------->TEIL -------TaNAC69(2)<-------MYC2              --------->AHL20(2)--------->ATHB12--------->LBD16 <------ --------ARR14(2) ------->MYC2             <----------DOF2<---------YAB1------>ZmHOX2a(1) --------->LBD16   aaatcctcagacggcaagcatgtgtttgtaaagtgaaactcatcgttttaatgattgaatatgcttattggatcctgaaccggagcctgaaccggagcgt  12653600                                                                      <-------TEIL                                                                     --------->CCA1(2)                                                                     --------->ARR14(1)                                                                    --------->ARR14(2)         <-----                                                                    <---------ARR14(2)--------->LBD16                                                                    --------->ARR11(1)<---------LBD16                  --------->YAB1                             <---------ANAC58        <---------ANAC46    --------->AHL20(2)      ------->TEIL                     <---------ANAC46        <---------ANAC58 ---ANAC46     --------->WOX13(1)                            <---------AtLEC2        <---------ANAC58 ---ANAC58   --------->WRKY18(1)     <-------TEIL            <---------ANAC58--------->HSFB2a(2) ---ANAC58   ------------>CBF        *TSS                  <---------YAB1    <---------HSFB2a(2)   >>   gaaccaaaaaatacagtcaatcggaaaatgaatttcagattcaaacttgttcatcgaaattttgcttgaagattcgaatcgagaagtccgtggaagagga  12653700                                                                               --------->SPL7                                                                           <------NtERF2                                                                          --------->LBD16                                                                          ------>NtERF2                                                                         --------->DEAR3(1)                                              <---------HSFB2a(2)       <---------RAP2.6(2)                                              <---------LBD16         <-----------RAV1(1)         ---                                              --------->HSFB2a(2)   ---------->DOF2              <---                                          <----------DOF2           <---------DOF5.7(2)         <----                                      ------->MYC2                <---------MYB52(1)            -----                                      ------->MYC3                --------->DOF5.7(2)           -----        --------->ARR11(3)            <-------MYC2               <-------GAMYB<---------MYB52(1)-----        <---------ARR11(3)            <-------MYC3               --------->At5g28300       --------->TOE2(3)  >>>>>>>>>TBF1                    --------->YAB1              <------NtERF2 <---------SPL7--------->TOE1(3) -ZmHOX2a(1)                     --------->ANAC58             ------>NtERF2--------->RAP2.3(1) ------ >>>>>>>TBF1                     --------->ANAC58            --------->ANAC46<-----------HVH21 <-----   agaagaagaagatgtctgtgcaagagtatttagacaagcatatgctttctcggaaaatcgaagacgccgttaatgccgccgtaagggctaaaacctcaga  12653800                                                                                                  ---                                                                                                  ---  <---------MYB52(1)                                                                           <----- --->ZmHOX2a(2)                                                                                ------ ---ZmHOX2a(2)                                                                                 <----- -----ARR14(2)                                                                                ------- ---->ARR14(2)                                                                  --------------->AGL15 ---->ARR11(3)                                                                  <---------------AGL15 ---->AGP1     <---------TOE2(2)            ------->TEIL      <-----------GT1  <-----------------AGL3 --->At4g35610 <---------TOE1(2)   <---------WOX13(1)      <---------YAB1    ------->TEIL  --------->DAG2 ----At4g35610<---------MYB52(1)<---------YAB1          --------->ICU4 --------->ATHB12   ---------->DOF2   tcccgttctcttcatcgtaagtttccttcgaattttgatttacatgtatcgaagtgaaattatgttacattactcattgaatcttcaattggaaaagtgc  12653900                                                                     --------->At4g35610                                                                  --------->ZAT2                                                                  <---------ZAT14                                                          =====================HOX2a_HOX2a                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                         ======================HOX2a_HOX2a       <---------At4g35610                              <---------ARR14(2)       --------->At4g35610                              <---------GLK1(2)                        ----       ----------->RAV1(2)                         ----------->RAV1(1)  <------ZmHOX2a(1)        ----     --------->YAB1                               --------->ANAC58--------->At4g35610          ------    <---------ATHB12                        ---------->DOF2  ----------->HVH21                <------ ------>ANAC58                          ----------->GT1 --------->ARR11(3)     ----------->RAV1(1) ------>ANAC58                    --------->MYB52(1)    <---------ARR11(3)--------->GLK1(1)   ------- ----ZAT18                --------->At4g35610     --------->ANAC46<---------At4g35610        -------- --->ZAT14       --------->At4g35610   <---------TOE2(2)--------->ARR14(2)<---------GLK1(1)  <------- ----ZAT14       <---------At4g35610   <---------TOE2(3)--------->AGP1  ============================= -->ALFIN1    ---------->DOF2  --------->YAB1     --------->ANAC58<---------ZAT2   --------->At4g35610   aggctaatcatctgaagaaagctgtatcatctgtgataacgaaggttaaagcacgacagatccttgacagcagaggaattccaacagttgaagttgatct  12654000                                                                <---------YAB1       ---------->DOF2                                       --------->ICU4  --------->ANAC58                                    --------->TOE1(2)  --------->ANAC58                              --------->HSFB2a(2) ----->ZAT14                                    <---------HSFB2a(2) ----->At4g35610   <---------ANAC58             <---------HSFC1(1) >ZmHOX2a(2)       <---------ANAC58             --------->HSFC1(1) ---At4g35610      <---------ANAC46            <---------LBD16-------->ATHB1 -->At4g35610  ================================================bZIP_DOF           <-----------GT1 ->ARR14(2) <---------ANAC58                  ----------->RAV1(2)           <---------WOX13(1) --ARR14(2) <---------ANAC58        --------->ALFIN1 <---------TGA1a      --------->ATHB12        --- =HOX2a_HOX2a  <----------DOF2 >>>>>>>>>>>>>>>>>LFY  --------->TGA1a     <---------YAB1          <---   gcacacgaacaaaggcgtttttcgtgcttctgttcccagtggtgattcttctggaacgtgagaattattcttactctgattgatatacaattctctaata  12654100  Previous    Next  AGI:  At2g29550.1    Description:  TUB7 (tubulin beta-7 chain). Identical to Tubulin beta-7 chain (TUBB7) [Arabidopsis Thaliana] (GB:P29515); similar to TUB2 (Tubulin beta-2), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62690.1); similar to TUB8 (tubulin beta-8) [Arabidopsis thaliana] (TAIR:AT5G23860.1); similar to TUB3 (TUBULIN BETA-3), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15467.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62796.1); similar to beta-tubulin [Eucalyptus grandis] (GB:ABS50666.1); contains InterPro domain Beta tubulin, autoregulation binding site (Inte Range:  from: 12651124    to: 12653114    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g29560.1    Description:  enolase, putative. similar to LOS2 (Low expression of osmotically responsive genes 1), phosphopyruvate hydratase [Arabidopsis thaliana] (TAIR:AT2G36530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21529.1); similar to unknown [Populus trichocarpa] (GB:ABK93148.1); contains InterPro domain Enolase; (InterPro:IPR000941) Range:  from: 12653637    to: 12656983    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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