Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ZAT14                                                                                        <---------ZAT14                                                                                        --------->REM1(2)                                                                              <---------ALFIN1                                                                             --------->At4g35610            --------->TOE2(3)                                    <---------ATHB12    <---------ANAC46          --------->ARR11(3)                     ----------->RAV1(1)    --------->At4g35610  <-------  --------->GLK1(1)    ----------->HVH21<----------DOF2      <---------MYB59 <---------At4g35610 <---  <---------GLK1(1)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<------ZmHOX2a(1)---------->CDC5  ---------   acggatttcaaataccttgaaggcagtcacagttctcagcctctttgcgaacaacatcaaggaccgaatcaataagctcagcaccttcagtgtagtgacc  12652700                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                --------->MYB52(1)                                                                --------->SPL1(1)                                                                <---------SPL1(1)                                                               <---------SPL1(2)                                                               <---------SPL7                                                             <---------------AtSPL3                                                             --------------->AtSPL3                                                            <------------------SPL14                                                          ----------->HVH21                                                         ------>ZmHOX2a(2)   ----------->HVH21                          --------->MYB52(1)            --------->At4g35610 ------>ZmHOX2a(2)                     --------->ZAT14                    <------ZmHOX2a(2)  <------ZmHOX2a(2)                     <---------ZAT14                    --------->CCA1(2)  --------->CCA1(2)                    --------->DEAR3(1)                 <---------AGP1     <---------AGP1                   <---------LBD16                     <---------ARR14(2) --------->ARR11(3)                   --------->At4g35610                 --------->ARR14(2) <---------ARR11(3)                  --------->MYB52(1)                   --------->AGP1     --------->ARR14(2)                 <---------ALFIN1                      --------->ARR11(3) --------->AGP1                <---------ABI4(2)                      <---------ARR11(3) <---------ARR14(2)                <---------ZAT2                         <-----------ARR10 <---------CCA1(2)       <---------MYB52(1)----------->HVH21           ----------->ARR10  ----------->ARR10 --ZAT18        --------->ZAT2                   --------->ETT(2)--------->SPL1(2) -------DOF2   --------->ANAC46                  <---------ETT(2)--------->SPL7   <<<<<<<<<SUP -->HVH21     --------->ANAC46              <---------LBD16------------------>SPL14            <-----   tttagcccagttattcccagcaccggactgaccgaagacgaagttatccggtcgaaagatctgaccgtacggaccagatctgacactgtccatggttcca  12652800                                     --------->HSFB2a(2)                                     <---------HSFB2a(2)                                   ------>MYB83                                   ------>MYB46(1)                                <---------HSFC1(2)                                --------->HSFC1(2)                                <---------HSFB2a(1)                                --------->HSFB2a(1)                               ------->TEIL                                               <---------HSFB2a(1)                            --------->ANAC58                                              --------->HSFB2a(1)                            --------->HSFB2a(1)                                          --------->ARR14(2)                            <---------HSFB2a(1)                                         <---------GLK1(2)                            --------->ANAC58--------->ANAC58                  ----------->GT1  ------                           --------------->AtSPL3                   =================================     --------->ARR14(2)    --------------->AtSPL8                   ------->GAMYB       --------->ARR14(2)     <---------ARR14(2)    <---------------AtSPL3                <-----------GT1    <---------LBD16 ------RAV1(2)           <------ZmHOX2a(1)  --------->ANAC58  --------->TOE2(3)--------->At5g28300   ggctccaaatccatgagaacagcgcgaggaacgtaccttccacaactcgcctcgttgtagtatacattaaccctctcaagctgtaactcggaatctccta  12652900                     <---------ANAC46                                     --------->WRKY12                --------->WOX13(1)                                        --------->WRKY38(1)        <-----------HVH21                                             --------->LBD16       --------->O2  --------->ANAC55(2)    <---------------AGL15   <---------LBD16       --------->TGA1a--------->LBD16      ----------------->AG<------MYB46(1)     --------->SPL7  <---------ANAC55(2)   ----------------->AGL1 --------->ARR14(2)   <---------SPL7    <---------ANAC58      ==========================================================   <-----------HVH21 <---------ANAC58<---------ALFIN1          <------MYB83<---------WRKY18(1) <----- >ZmHOX2a(1)    --------->KAN4(2)   --------->MYB46(3)     <---------ARR14(2)                  ------ ================MYC_MYB          <-----------GT1          --------->ARR14(2)                 <------   cataccgtcccgtctgatcaatcccgtgctcgagattaaccacttcccaaaacttggaaccgatttggtttccgcattgacctccttgaatatgaagaat  12653000                                                                                                    <                                                                                                   ==                                                                                                   --                                                                                                  <--    ------->TEIL                                                                                  ===    <-----------ARR10                                                                             <-- --------->ANAC46                                                                                ---- --------->ANAC55(1)                     ----------------->AGL3                                  <--- --------->ANAC55(2)                     ------>ZmHOX2a(2)                     ---------->DOF2   <--- <---------ANAC55(2)                   <---------ARR14(2)                 --------->DAG2         ---- --------->ANAC58                      --------->ARR14(2)         --------->GLK1(2)              <--- --------->ANAC58                      <---------ARR11(3)        <---------ARR11(3)              ---- ==========================================================MADS_MADS     ---------->DOF2         <--- ------ARR10                --------->TOE1(3)                    --------->ARR11(3)              ---- --->GLK1(2)                --------->TOE2(3)---------->DOF2     <---------GLK1(2)              <---- ---GLK1(2) ----------->HVH21          <---------AGP1           <---------RVE1(1)       --------->At4g35610   ctcacgcatcttcgctcacagagaagaaaaccctaaaactggatctaaaaagagagagagagagagagattttgaaaaagggaaaggagaagcagagagg  12653100          <---------YAB1 ----------DOF2 ==================================HOX2a_HOX2a ---->ZmHOX2a(2) ----ZmHOX2a(2) ==================================HOX2a_HOX2a -------RVE1(1) ----->ARR11(3) ------ARR14(2) --------ARR10                                                           <------MYB46(1) ----->ARR14(3)                           ---------->DOF2                <------MYB83 ------ARR14(3)                        --------->YAB1       --------->RAP2.6(3) ----->ARR14(2)                      <-----------TBP       <-----------GT1 ------ARR11(3)                   <-------TEIL             --------->MYB52(1) ----->GLK1(2)               --------->ALFIN1        ----------->GT1     ----------->GT1 --ZmHOX2a(1) *TSS          <------ZmHOX2a(1)  ---------->DOF2          --------->MYB59   --------->DEAR3(2)   atcttttgttttatgagagagagaagaagaggagggtccatttataaagaaaaggaggttttaacggctaatatttggtaattcgaaatcgaatcgacgg  12653200                         <------NtERF2                     --------->ZAT2              ---------->DOF2           --------->bZIP60(2)           --------->O2--------->ALFIN1                           ---------->DOF2           ----------->GT1                                ----------->GT1                --------->AHL20(2)           --------->ANAC55(1)                          <---------ANAC58                 <---------AHL20(2)           --------->ANAC58                             <---------ANAC46           <---------ANAC58           --------->ANAC46        <------NtERF2        <---------ANAC58           <---------ANAC55(2)           <---------ANAC55(2)    ----------->GT1  --------->MYB52(1)              <---------ANAC46<-           --------->ANAC55(2)   --------->ALFIN1 <---------AHL20(2)               ----------->GT1<--           --------->ANAC58   <---------MYB46(3) --------->AHL20(2)                <---------ANAC58<-   tttagataatgccacgtaaatcgaggtggcaacgggtggcaaaattcaaaaattaatggctcgtgataaaaagtttttttgaatttcgtaaaaaaatatg  12653300                                                                  <----------DOF2                                                                  <---------DAG2                                                              ------->PIF4                                                              <-------PIF4                                                              <-------MYC4                                                              <-------PIF5                                                              ------->MYC4                                                              ------->PIF5                                                              ------->MYC2                                                              <-------MYC2                                                              ------->MYC3                                                              <-------MYC3                                                             ================bZIP_DOF         -------                                                             <---------TGA1a                  -------                                                             ================bZIP_DOF        --------                                                             --------->TGA1a                 ========                                                             ========================================            --------->ZAT2                                  ------------>OsbHLH66            ------>MYB83            <---------ZAT2                                  <---------TOE1(2)           --------->ARR14(2)            <---------At4g35610                            <------------OsbHLH66        <---------ARR14(2)       ----------->HVH21                                   <---------ALFIN1       --------->DAG2      <---------WOX13(1)          ----------->GT1        --------->ANAC58        ==================== --------ANAC58             <------ZmHOX2a(1)            --------->ANAC58        ---------->DOF2 -----TEIL  --------->At4g35610 <---------ZAT14      <---------ALFIN1      ----------->GT1   ------>MYB46(1) --------ANAC58           <---------TOE2(3)         <---------ZAT18   <---------YAB1  <---------MYB46(3)   ttcgtgtgaatgacagctggattccattaaggagagcagttactaaaacatcgtcgcactcgcacgtgctttatgagagataaaaaagcggttccaacct  12653400        <-------MYC4        ------->MYC3        <-------PIF5        ------->MYC2        <-------MYC2        ------->MYC4        ------->PIF5        <-------PIF4        <-------MYC3       <---------TGA1a       --------->ANAC55(2)       ============================================bZIP_DOF       --------->O2       --------->ANAC58                                                                            <-       <---------O2                                                                                <-       --------->ANAC58                                                                      --------       --------->TGA1a                                                                       --------       <---------ANAC55(2)                                                              --------->ZAT18      <---------TOE1(2)                                                                 <---------ZAT18 ---->RAV1(2)                                                                           <---------ZAT14 -->ZAT2------->PIF4                                                                 <---------bZIP60(2) >P  <------------OsbHLH66                                               ---------->DOF2--------->ZAT14 ================MYC_MYB                        <----------DOF2  <---------AtLEC2    <---------ANAC46 =MYC_MYB           <---------YAB1         <-----------GT1  --------->ARR14(2)      <---------------- ================bZIP_DOF               <----------DOF2     <---------ARR14(2)     <---------ZAT14 --   ggcaatcgcacgtgagagacttcttattgggcctaaaatgggcttttactcttttcatttcaaatctgcatgacttaaaacggagtgatgtgcactagca  12653500             --------->ANAC58        --------->ANAC46                                                          ----------->RAV1(2)        --------->ANAC58                           <---------WOX13(1)            ------>NtERF2        --------->ANAC58                          <------------CBF              --------->ARR14(2)       --------->SPL7                            <--------ATHB1             <---------LBD16       --------->RAP2.6(3)                       -------->HAHB4       ------>ZmHOX2a(2)    <-----------RAV1(2)                          --------->ATHB12     ----------->RAV1(2)   ------>ZmHOX2a(1)        ----------->GT1      <---------ICU4      <------ZmHOX2a(2)  --------->TOE2(3)        --------->DAG2       --------->ICU4      --------->ARR14(2)        <------ --------ARR14(2) <-------MYC3                  <---------ATHB12    <---------ARR14(2)        <------ --------ARR11(3) <-------MYC2                  <---------YAB1 <------------CBF <---------ARR14(2) ->ANAC58    --------->ANAC58                  <---------TOE2(3)    --------->ARR11(3)  <---------LBD16 ->ANAC58 <------NtERF2   ---------->DOF2     --------->YAB1 <---------YAB1------->TEIL------->TEIL -------TaNAC69(2)------->MYC2              --------->AHL20(2)--------->ATHB12--------->LBD16 <------ ------->ARR14(2) ------->MYC3             <----------DOF2<---------YAB1------>ZmHOX2a(1) --------->LBD16   aaatcctcagacggcaagcatgtgtttgtaaagtgaaactcatcgttttaatgattgaatatgcttattggatcctgaaccggagcctgaaccggagcgt  12653600  Previous    Next  AGI:  At2g29550.1    Description:  TUB7 (tubulin beta-7 chain). Identical to Tubulin beta-7 chain (TUBB7) [Arabidopsis Thaliana] (GB:P29515); similar to TUB2 (Tubulin beta-2), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62690.1); similar to TUB8 (tubulin beta-8) [Arabidopsis thaliana] (TAIR:AT5G23860.1); similar to TUB3 (TUBULIN BETA-3), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15467.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62796.1); similar to beta-tubulin [Eucalyptus grandis] (GB:ABS50666.1); contains InterPro domain Beta tubulin, autoregulation binding site (Inte Range:  from: 12651124    to: 12653114    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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