Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         -------->HAHB4                                                       <--------ATHB1                                                       --------->ATHB12                                                       <---------ICU4                                                       --------->ATHB51                                                      --------->AHL20(2)                                                      --------->ICU4                                                      <---------ATHB51                                                      <---------YAB1                                           <---------AHL20(2)                                           --------->AHL20(2)                                          --------->AHL20(2)         --------->YAB1                   <---------LBD16   ------->GAMYB    <---------AHL20(2)         --------->AHL20(2)                 <-----------GT1     <---------MYB59 --------->AHL20(2)       --------->TOE2(3)              <---------GLK1(2)   --------->MYB52(1) <---------AHL20(1)--------->ZAT6              <-     <---------GLK1(1)        ----------->GT1       --------->YAB1   <-----------GT1<---------ARR11(3)     --------->GLK1(1) --------->ARR14(2) <---------AHL20(2)        <---------ATHB12--------->ARR11(3)   aaactggatttctacagattatccggttcgactggttaaccgaattaaattccaaaataattggactctaatcacactatccataaaatctaaaacattt  12641200                                                                      --------->ALFIN1                                                                    <---------ANAC58                                                       --------->ANAC46                                                       --------->ANAC58                                  <---------YAB1       --------->ANAC58--------->At4g35610                    <---------TOE1(3)                ---------->DOF2<---------ANAC58 ---------DOF2      <---------TOE2(3)            <----------DOF2  <-----------GT1   tctttgttaatctgaagcatttaaggctgtctgagtattatgggccatgggctttaaaagcaattgtataacgtgctgaattgaatagaatattactaaa  12641300                                                                                               ------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                      <-----------ARR10                                                                                    <---------MYB59                                                                                   --------->ANAC58                                                                                   <---------TGA2(1)                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                   <---------bZIP60(1)                                                                                   --------->bZIP60(1)                                                                                   --------->TGA2(1)                                                                                   ----------->GT1                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC55(2)                                                                                  ----------->STF1           ---------->DOF2                                                       <---------TGA2(2)   <---------TCP20                   <---------ANAC46                   ----------->GT1--------->HSFC1(2)   --------->PCF2               --------->MYB52(1)    <---------At4g35610       ----------->TGA1  <--   <---------PCF2 <------ZmHOX2a(1)------->GAMYB      --------->At4g35610     <---------ICU4<--------   aactgggcccatctaaaggaggattaaacaaatccaacggtgtatattggacattgagctccactaagtaagtagggtcacaatgacgtaacttcccgcg  12641400                   <---------TOE1(2)                 --------->ZAT18                 <---------SPL7                 --------->TOE1(2)                <---------ANAC58                <---------ANAC58        <---------ARR14(2)                                                                  <--------        --------->GLK1(2)                                                               ---------->DOF2    --------->ANAC58                                                               --------->RAP2.6(2)    --------->ANAC46                                                             <------NtERF2    <---------ANAC55(2)                                                         ------>NtERF2--------    --------->ANAC58                                                            <---------DEAR3(2)    --------->ANAC55(2)  <-----------------AGL3                                 <---------ATERF1(1)   <---------LBD16 --------->SPL7                      <-----------GT1         <---------DEAR3(1) -------->OsCBT--------------->AtSPL8                --------->YAB1           --------->ATERF1(1) ---TOE1(2)    <---------------AtSPL8             <---------ICU4              <---------MYB52(1) -->LBD16      --------------->AtSPL3           <---------AHL20(2)           <-----------HVH21 ->LBD16--------->ARR14(2)         --------->PCF2--------->ICU4          --------->ARR14(2) --------- -----TEIL     <---------------AtSPL3     <----------DOF2                <---------ARR14(2) --------- -LBD16<---------GLK1(2) <-----------------AGL2--------->YAB1      <-----------GT1 ----------->RAV1(1)   ttcattacggaatcttgagcgtacgattctactattgggcccatctttataaaaattatactgttttttttactaaatccgtcggccacaaaaagatatg  12641500 -ARR11(3) ->CCA1(2)                                  <------NtERF2                                    <------- >ARR11(3)                                <---------DEAR3(1)        --------->MYB46(3)     *TSS >ARR11(1)                       --------->ANAC46                --------->REM1(1)         <---------   ttttttttttttgggaaaaaaaaaaaacaacttcgacgaaagactcggcgaacaaaacacactcgcttcaacaactctctatctctctctacttgtcact  12641600                                                                                   ------>NtERF2                                                                                 --------->RAP2.3(1)                                                                                 <------NtERF2                                                                                <---------RAP2.3(1)                                                                                <---------DEAR3(2)                                                                                <---------ERF1                                                                                <---------RRTF1(1)                                                                                ------>NtERF2                                                                                <---------ORA47(2)                                                                                <---------ATERF1(1)                                                                               <---------RAP2.3(2)                                                                               <---------At1g77200                                                                             <-----------HVH21                                                                           <-------TEIL                                                                        <---------ZAT2           ----                                                                        <---------At4g35610    ------                                                                        --------->ZAT2        <------                   ---------->DOF2                                      --------->At4g35610  <-------                <-----------GT1                                       <---------WRKY12     <---------         --------->ANAC58                                           <-----------HVH21<----------DOF2      <---------REM1(2)                                      ----------->HVH21 <---------DEAR3(1)<--- ----GT1 --------->ANAC46                                  <---------At4g35610 <---------DREB2C(2)<-- --HVH21 --------->ANAC58                                  --------->At4g35610 <---------RAP2.3(3)---   ctctaatctacacacaattaacaaagctcaatctctctcttctcttactctctacctctgtagctgatagggtcagcttcgtcggcgctatttctgccgg  12641700                  ------>ZmHOX2a(2)                  ====================================HOX2a_HOX2a                  ===============================HOX2a_HOX2a   --------->ANAC46   --------->ANAC58                                ------>ZmHOX2a(2)   --------->ANAC58                               <---------At4g35610  <---------LBD16================================HOX2a_HOX2a ----->ARR14(2)  <------ZmHOX2a(2)             ------>ZmHOX2a(1) --->LBD16       =====================================HOX2a_HOX2a ---ANAC46      --------->AGP1               ----------->RAV1(2) --LBD16        <---------ARR11(3)        ------>ZmHOX2a(1)                                         < --RAV1(1)      --------->ARR11(3)        ================HOX2a_HOX2a                             <-- ------ARR14(2) --------->ARR14(2)     <-----------GT1                                            <-- -------GLK1(1) <---------ARR14(2)    <-----------GT1       --------->ZAT6           <-----------GT1< ------>GLK1(1)<---------GLK1(1)  <----------DOF2--------->ARR14(2)  --------->At4g35610          <--   atttcacggacgatttgagatctgttcttccttcttcttttttcctctcctgatctgattcaactctaatctgcttcagtctctgtgttacgaactgatt  12641800       <-------TEIL     <---------SPL7   <---------------AtSPL8   <---------------AtSPL3   <---------TOE1(3)  <-----------RAV1(2)                                                                  <---------ANAC55(2) ---------MYB52(1)                                      --------->ZAT6                 ----------->GT1 -------ANAC46                    <-----------GT1     --------->YAB1        <---------ZAT6 -------ANAC58               <---------DAG2          <---------ATHB12    ------>ZmHOX2a(1) -----------HVH21            <----------DOF2--------->ZAT6      <---------ZAT6         <---------ANAC46 -------ANAC58       <-----------GT1     ----------->HVH21    <---------ANAC46    <---------ZAT6   ccgttcaggtacggttcgatttttttccaagctttttcactctctgacactgccaataacactctcgtgttagtcctggtgttagtgttatgtgaattca  12641900                    --------->ANAC58                    --------->ANAC58                   <---------ZAT18                   --------->ZAT18                 --------->REM1(2)                 <---------SPL7               <---------------AtSPL3               <---------------AtSPL8               --------------->AtSPL8                                       <---------YAB1            <---------ANAC58                                                <---------TOE2(3)            <---------ANAC46                                       ----------->GT1            <---------ANAC58        ------>ZmHOX2a(1)           <----------DOF2                 <----        <----------DOF2        <----------DOF2         --------------->AtSPL8                --------     ------>ZmHOX2a(1) <----------DOF2                 <---------------AtSPL8        <---------HSFB2a(2)   tcgattcctgctttgtgtgtgtacgctttaggcctttcctgttactaatcttgttttttagtacttctttggtaaattaagaaagtttgagaagaatgtg  12642000                                                                                    --------->ARR14(2)                                                                                    <---------GLK1(2)                                                                                    <---------ARR14(2)                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC55(2)                                                                                <---------LBD16                                                                             =======================HOX2a_HOX2a                                                                             ------>ZmHOX2a(2)                                                                            ========================HOX2a_HOX2a                                                                            <------ZmHOX2a(2)                                                                           <---------ARR14(2)   -----                                                                           --------->ARR14(2)  <-----                                                                           <---------ARR11(3) -------                                            <---------At4g35610            <-----------ARR10  <------                                         ------>ZmHOX2a(1)                 --------->ARR11(3) -------                                <----------DOF2                            <---------AGP1     <------                         <------------------------ANAC81                   --------->AGP1     -------                     <----------DOF2    --------->TOE2(3)                 <---------CCA1(2)<---------TOE1(3)  <------------------------ANAC81    <-----------GT1          --------->GLK1(2)--------->MYB52(1) --------------------ANAC81     <---------DAG2<----------DOF2<---------GLK1(2)<---------SPL7 <------ZmHOX2a(1) --->GT1    <----------DOF2  <-----------GT1--------->At4g35610         --------->YAB1     <---------TOE2(3)   attttgttttggttcttttgatactttagttttactttttttcctcagctttaatcttgtagagattcttctaatcagatcttacggattcttaaggatc  12642100  Previous    Next  AGI:  At2g29510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21541.1); contains InterPro domain Tubby, C-terminal (InterPro:IPR000007) Range:  from: 12641591    to: 12645095    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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