Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------YAB1                                               --------->YAB1      <---------ICU4                                                <---------ATHB12   <---------ICU4            <---------DAG2                       --------->WOX13(1) ---------At4g35610          <----------DOF2              --------->HSFB2a(2)                -------- -TOE2(3)        ---------->DOF2         --------->AtLEC2 <---------HSFB2a(2)               ---------   tcaactcattactactgaacaaagcttgatactttatctaaacatgcactaaattcgcttctaaaaatcaatcaaaactaaaaccccaatccaaaaaagc  12622100                                                <---------HSFC1(2)                                                --------->HSFC1(2)                                                <---------HSFB2a(1)                                                --------->HSFB2a(1)                                                --------->ZAT2                                      ------>ZmHOX2a(2)                                     <XXXXXXXXXXXXXXXXXXXXXMIR167D                                     <------ZmHOX2a(2)                                    --------->ARR14(2)                                    <---------ARR11(3)                                    --------->AGP1                                    <---------AGP1                                    --------->ARR11(3)                                    --------->ARR14(3)                                    <---------ARR14(2)                                    <---------ARR14(3)                                   <---------CCA1(2)                        --------->GLK1(2)       <---------ZAT2   --------->ARR14(2)                        <-----------ARR10--------->ATHB12        <---------ARR14(2)                        <---------ARR11(3)      --------->At4g35610      <-------GAMYB                <----------ID1    ----------->ARR10       ---------->DOF2--------->At4g35610              <---------------AtSPL8<-----------ARR10--------------->AGL15                         <- ->DAG2    ---------->DOF2 ----------->HVH21    <---------At4g35610     <---------MYB46(3)         -- ->DOF2    --------->MYB52(1)   <---------At4g35610  <---------------AGL15               <----------DOF2   actctttctaaactaaagggaacaaaaatctgaccgcagatcttgatgggagcttccaattcaagcagattgggctgttgaagaaatatttctttggaga  12622200              ------->TEIL         --------->MYB52(1)        ----------->HVH21                                 <---------ANAC58    ------>MYB83        ----------->TGA1                        <---------ARR14(2)            --------->MYB52(1)    <      <---------At4g35610                     --------->LBD16    --------->HSFB2a(2)       --------->ARR11(3)      --------->ZAT2                         --------->LBD16     <---------HSFB2a(2)    --------->AHL20(2)      --------->At4g35610               <---------ANAC58  <---------ANAC46    ------>MYB46(1)       -      <---------ZAT2          --------->At4g35610   --------->LBD16         --------->AtMYB61    ----   ---------->DOF2            <---------At4g35610<------ZmHOX2a(2)          ------->GAMYB  <---------ARR11(3) --------At4g35610    <-----------HVH21 <---------ANAC58  <---------ANAC58 --------->MYB46(3)    <--- ------->At4g35610<-----------GT1  ------->TEIL --------->ARR14(2)--------->LBD16       --------->YAB1   cagcacaaagctgacgaatttcaccttcactgagatgaacttgcttccccgatccaggtctcgtgttccgaaactcaaccaaacgacgaataatatcgtc  12622300                                                    ------>NtERF2                                                    --------->LBD16                                                   --------->ANAC46                                              <----------DOF2                                            <------NtERF2                                           ------>NtERF2                                           <---------ATERF1(1)                                          --------->RAP2.3(3)                                          <---------DEAR3(1)                                          --------->RAP2.3(2)                                          <---------ATERF1(2)                                          --------->DEAR3(1)                                          --------->ATERF1(2)                                         <---------LBD16                                         <------NtERF2                                         --------->ATERF1(1)                                       <-                                         --------->RAP2.3(1)                                       <-                                         --------->DEAR4(2)                               <---------GLK1(2)                                         --------->ORA47(2)                               --------->ARR11(3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------LBD16                         <---------ARR11(3)     <-----------RAV1(2)                <---------RRTF1(1)                                --------->ARR14(2) ---------ARR14(2)                      <---------RAP2.3(1)                               <---------ARR14(2) -------->ARR14(2)                      <---------ATERF1(1)                             ----------->ARR10 ----->HSFB2a(2)                        ------>NtERF2 <---------ALFIN1             --------->MYB52(1) ------HSFB2a(2)          <---------At4g35610<---------GLK1(2) <------ZmHOX2a(2) <---------MYB52(2)<-   gagaactgcaggttccatcgctcgcttctgctcttgctcttgcgccggcttctccgccatctccgatctaaacgaggtagaaaacgaacggagattttca  12622400                                                    <---------ZAT14                                 -                                                    --------->ZAT14                                 <                                                    --------->ZAT18          <------MYB83           -                     --------->LBD16              <---------ZAT18            <---------MYB46(3)     <          <---------ANAC46                        --------->ZAT18            <------MYB46(1)    <----          <---------ANAC58                       <---------ANAC58           *TSS<-------TEIL    -----          <---------ANAC58                       <---------ANAC58          <---------WOX13(1)  ------      <---------ANAC58       <------ZmHOX2a(1)   --------->ALFIN1        --------->ATHB12   ---------      <---------ANAC58    <------ZmHOX2a(1)    <---------ANAC46         <---------YAB1      <-------- --------ANAC58      ------>NtERF2             <---------ANAC58       --------->YAB1       <---------AHL20(2) --------ANAC58<---------ANAC58                <---------ANAC58     --------->ICU4      <---------AHL20(2) --------ANAC46<---------ANAC58       --------->LBD16               <---------YAB1     <---------AHL20(2)   agcgtgaagcttgcgtttcgagccgcgaggaggagagacccgaagactggtgtgtgctctgagattagtcaatattgattggttcattttttatttattt  12622500                                                                                            <--------       --------->ANAC46                                                                --------->TOE2(3)       --------->ANAC55(2)                                                          --------->GLK1(2)     <-----------GT1                                                               --------->KAN4(2) --------->AHL20(2)                                                                <---------ARR14(2) <---------AHL20(2)                                                                <---------GLK1(2) -------->AHL20(1)                                                                <---------HSFC1(2) ---------AHL20(1)                                                                --------->HSFB2a(1) -------->AHL20(2)                                                                <---------HSFB2a(1) ---------AHL20(2)                   --------------->AtSPL8                       --------->HSFC1(2) -----AHL20(2)                ------>MYB83        <------------CBF           <---------HSFB2a(2) ---->AHL20(2)                ------>MYB46(1)    --------->ATHB12            --------->HSFB2a(2) --->AHL20(2)                 --------->MYB52(1)<---------AHL20(2)           <---------HSFC1(1) >AHL20(2)                  <---------MYB59  <-------MYC3                    --------->HSFC1(1) -AHL20(2)                ------->TEIL       ------->MYC3                <----------DOF2<----------DOF2   aatttatttacgagacctgagtgaaatcaacctaatgggtatgtacacgttttattgggcctgtaaatgggctatctttctagaagattcctttatacaa  12622600                                                                                                   <-                                                    <---------YAB1                            -------                                                   <---------TOE2(3)                          -------                                                  --------->YAB1                              -------                                                  <-----------GT1                             <------                                                  --------->MYB52(1)                         --------                                                 --------->ICU4                              <-------                    <---------ARR11(3)         --------->YAB1                              --------->YAB1        --------->At5g28300                 ----------->GT1    --------->YAB1             --------->ICU4    --------->MYB52(1)                    <------ZmHOX2a(2)    ----------->GT1          --------->YAB1 ---GT1----------->GT1               --------->ANAC46--------->ATHB12        <-----------GT1 <-------   atttccaaacggtagaaaactagttcttctagcctctctacgcgatcagtaataacgattggcgatagtaatatagtattcactattcagtagtaatgat  12622700      <---------ZAT6                                 <---------YAB1      <<<<<<<<<ARR2  <---------ARR14(2)                               <---------ICU4      --------->WOX13(1) --------ANAC46                                    -------->HAHB4   <-----------GT1 ->HAHB4                                           --------->YAB1   --------->YAB1 -->YAB1                                 <---------WRKY12          <---------YAB1 -->ATHB12                               <---------WRKY38(1)     --------->YAB1                 ----- ---ICU4                               <-----------HVH21         <---------ICU4                ------ ->ICU4                     <---------ANAC46      --------->ICU4<---------ATHB12      <---------YAB1 --ATHB12              <-----------RAV1(1)        <---------YAB1<---------ATHB51 <-----------GT1<---- --YAB1          <---------ARR11(3) <---------At4g35610  ----------->HVH21--------->YAB1      <------   gggggatagtgatcaacaatatgttttgttgtttgtttagcagtcatcggtaatgatcagtgaccaattataacaatcaaatgttactatgttagtatga  12622800                                                                                   --------->DAG2                                                                                  ---------->DOF2                                                                            --------->ANAC58                                                                            --------->ANAC46                                                                            <----------ID1                                                                            --------->ANAC58                     <--------P                                         ---------->DOF2        <---------ANAC55(2)                                             <---------AHL20(2)        --------->ANAC55(2)                                            --------->AHL20(2)       <---------LBD16                    --------->TOE2(3)        --------->AHL20(1) ---->ARR11(3)     ----------->GT1 --------->YAB1                  --------->AHL20(2) --->YAB1--------->LBD16           --------->TOE2(3)               <---------AHL20(1) -----ARR11(3)<---------AHL20(2)--------->WOX13(1)                --------->AHL20(2) ---YAB1--------->ANAC46      <------ZmHOX2a(2)   --------->TOE2(3)<---------AHL20(2)   tattcgttttccgtaattaagtggtagattagatcaatcttaattcttaaattcttaattagcgactaataaattaaaacgccaaaaagtttgaattagc  12622900                                                                                         <---------ZAT6                                                                                   <---------ARR11(3)                                                                                   --------->ARR11(3)                                                                               ------->GAMYB                                                                              --------->MYB46(3)                                                                             --------->ANAC58                   <-----------RAV1(1)         --------->GLK1(2) ------->TEIL--------->ANAC58     ---                   <---------ZAT6 <----------ID1         <-----------GT1   --------->MYB46(3)    ----   aaattagttactgaaaacttagtgttgccatcaaaaactacaaaacaacaatctatttgttaccatgaaactacaaaacaaccaagatttagtgtttgat  12623000  Previous    Next  AGI:  At2g29400.1    Description:  TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1); protein serine/threonine phosphatase. Identical to Serine/threonine-protein phosphatase PP1 isozyme 1 (TOPP1) [Arabidopsis Thaliana] (GB:P30366); similar to TOPP2 (Type one serine/threonine protein phosphatase 2), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G59160.3); similar to TOPP2 (Type one serine/threonine protein phosphatase 2), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G59160.2); similar to TOPP2 (Type one serine/threonine protein phosphatase 2), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G59160.1); similar to Serine/t Range:  from: 12620158    to: 12622476    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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