Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ATHB12                                                      -------->ATHB1                                                      -------->HAHB4                                                      --------->ATHB51                                <------MYB83          <---------ICU4                                ----------->GT1      --------->ICU4                         <--------       <---------AHL20(2)       <------MYB46(1)      <---------YAB1                        --------->ICU4       --------->AHL20(2)      --------->MYB59       <---------ATHB51   <---------------AGL15    --------->WOX13(1)--------->AHL20(2)          --------------->AGL15 --------------->AGL15  <------ZmHOX2a(2)   <---------AHL20(2)          ------------>ATHB5   ----------------->AGL3 ------ZmHOX2a(1)     <---------AHL20(1)          =======================================MADS_MADS ----->AGL15--------------->AtSPL8           ------>ZmHOX2a(1)         <-----------------AGL3 ------AGL15<---------------AtSPL8   <-----------GT1 <---------ATHB12  <-----------------AGL2   aaggatcaattaaactagtactattttatttgtttggttaaactatccttctctaattattgcaacttatgtgtctatatatggattaatgtcataagta  12596700                                                                                              <------                                                                                              -------                             <---------MYB52(1)                                              <-------                            --------->TOE2(3)                                              --------->WOX13(1)                           <---------ZAT6 --------->YAB1                                  <-------TEIL                 --------->ZAT6--------->MYB52(2)              ------>ZmHOX2a(1)     --------->LBD16            --------->YAB1 <---------ANAC58                  --------->ZAT18   <---------ALFIN1 -ICU4   ---------->DOF2   <---------ANAC58           --------->YAB1           --------->AtMYB61<----   ctagatggaatcaaagataacactaaatagcgttagtcatagaatcatactcacaagaatgagtcctctaagttcaatggaccactccgaagtccatcat  12596800                 <---------AHL20(2)                --------->AHL20(2)                     ------>MYB46(1)                --------->YAB1                         ------>MYB83 ---ICU4   <---------ATHB12                          <---------MYB59 -->YAB1  ------>MYB83    ------>ZmHOX2a(1)      <---------ZAT18 --ATHB12--------->WOX13(1)                      --------->ZAT14                <---------ICU4 -----YAB1------>MYB46(1) <----------DOF2        --------->ZAT18<-----------GT1<---------YAB1<-------   gagaacaagaccaatcaataaaaatgtccttttgttatctaaattagcaagtgtaccaaattttgttcaccattctaacttataatttcagttttctttt  12596900                                                                                          <---------CCA1(1)                                                                                          <---------RVE1(1)                                                                                   ------>MYB83                                                                                   ------>MYB46(1)                                                                                 <---------MYB111(2)                                                                                 --------->AtMYB61                                                                                 <---------ALFIN1                                            --------->ARR11(3)                   <---------MYB111(1)                                            <---------ARR11(3)               <---------MYB55(2)                                       <---------WRKY45                      --------->MYB46(3)                                       <---------WRKY38(1)                 <---------ARR14(2)                                       <---------WRKY12                    --------->ARR14(2)                 ----------->GT1      <<<<<<<<<<WRKY40              <---------ANAC58     <---------ARR11(3)                 <----------ID1       <<<<<<<<<<WRKY18              <---------ANAC58     --------->ARR11(3)       --------->ARR11(3)   ---------->DOF2 <---------GLK1(2)     <---------AHL20(2)   ----------->ARR10   <---------ZAT14  >>>>>>>>>>GT-3b   --------->WRKY18(1)    <---------ARR11(3)  --------->MYB46(3) ---DOF2       ---------->DOF2        <<<<<<<<<<WRKY62     ----------->GT1<------ZmHOX2a(1)   gtgagtgaagttattgaaaaagaaaaataagaaagtattggtcaaagattttgacaacaacaagttattttcttgaggaaccaccaacttagatatttta  12597000                                               <---------ALFIN1                                             ----------->RAV1(1)    <---------ICU4            <------                                             --------->AtMYB61      <--------ATHB1           --------                                             <---------ALFIN1       --------->ATHB51         --------                                            --------->ANAC46       <---------ATHB12         <-------TEIL                    ------>ZmHOX2a(1)     --------->ANAC46         <---------ATHB51    <---------ALFIN1             <---------YAB1               <-----------GT1      ------------>CBF       ------>ZmHOX2a(2)   gtcatgttctctgttataagtcctactgctactacataatgtttccaccacacataaaaaacaaactcaataattcacacttatctgatccacattcatt  12597100                                                                                            ------>NtERF2                                                                                         --------->ZAT14                <---------ARR14(2)   --------->YAB1                                      <---------ZAT18  <---------AHL20(2)                *TSS                             <---------YAB1      <---------ZAT14 ------CBF      --------->ARR14(2) --------->ANAC58          <---------REM1(2)    <-----------GT1   < ->ATHB12      <---------GLK1(1)   --------->ANAC58     <---------ANAC46  <---------ZAT14--------->ABI4(2) ->YAB1       <----------DOF2      --------->ANAC46--------->CCA1(2) ----------->HVH21  --------->ALFIN1   gtatataatcttatggcatttctggtcatttagtctcaagcaaaatggataagagatggagtctacaaggtatgactgctcttgtaaccggtgcagccag  12597200                                                                                                 ----           ---------->ID1                                                                        <---        <-------TEIL                                                                          <------ ---------ARR14(2)     --------->ZAT14      ---------->ID1                         ---------->DOF2 <-   tggaatcgggttcgtcttaattctctgttctctatatcatgtttttggctcattgttcttcttgtatttctaaattgtcaagacttaaaggaatttttgt  12597300         --------->ANAC58         --------->ANAC58     <------MYB46(1)     <------MYB83    --------->MYB59   <--------P <---------ZAT6 <---------REM1(1)                                          --------->bZIP60(1) ----->ZAT14                                                <---------bZIP60(1) ------ZAT14                                             ----------->HVH21 ---ANAC46                                          <---------ARR14(2)             ---------->DOF2 <- --------ANAC46       <------ZmHOX2a(1)             --------->ARR14(2)            <---------WRKY38(1)   gtagtgtaggtatgccatagtagaggagttagcaagttttggagctataatccatatatgtgacatctctgaaactcttctcagtcaaagtttaagtgaa  12597400                                                   ----------------->AGL1                                                  ------>NtERF2                                               --------->HSFB2a(2)                                           <---------ANAC58                                           <---------ANAC58          ----------->GT1             <---------REM1(1)      ---------->DOF2                 <---------bZIP60(2)                           ------>ZmHOX2a(1)  ---------->DOF2       ----------->GT1  ------->TEIL      ----------->GT1      --------->ARR14(2) ---------ID1           <---------MYB46(3)<---------At4g35610                 <-----------HVH21   tgggaaaagaaagggtttcaagtgagtggttcaatctgtgatgtagcttctcggcccgatagagaaaaactgatgcaaaccgtctcctcgctgtttgatg  12597500                                                   --------->ANAC58                                              --------->ANAC58                                         <----------ID1                                    ---------->DOF2--------->ANAC58                  --------->ARR11(3)                                  <------ZmHOX2a(1)--------->AtLEC2                  <---------ARR11(3)                           ==============HOX2a_HOX2a                             --------->TOE2(3)                           ------>ZmHOX2a(2)  --------->ANAC58         <---------At4g35610          <                         --------->ARR11(3)  --------->DAG2           --------->ARR11(3)   --------->HSFB2a(2)                         <---------ARR11(3) ---------->DOF2     ---------->DOF2 --------->YAB1 <-----                   --------->AHL20(2) --------->DAG2 --------->YAB1   <---------ARR11(3)   <---------HSFB2a(2)   gcaaactcaacattcttgtaagtaaatgatcttataggaaaaggcgaaaagccaagcatagttgtttaaagagagcttcttaacataaatcttatggaaa  12597600  Previous    Next  AGI:  At2g29300.1    Description:  tropinone reductase, putative / tropine dehydrogenase, putative. similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29320.1); similar to unknown [Populus trichocarpa] (GB:ABK94936.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 12595274    to: 12596616    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g29310.1    Description:  tropinone reductase, putative / tropine dehydrogenase, putative. similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29320.1); similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29300.1); similar to tropinone reductase [Cochlearia officinalis] (GB:CAO02390.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 12597136    to: 12598440    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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