Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->ARR14(2)                                      <-----------------AGL2           <---------ARR14(2)                                     <---------At4g35610         <---------ETT(1)                ----                                     --------->STY1(2)           --------->ANAC46          ----------                                     --------->ZAT2              ----------->HVH21        --------->YAB1                                 --------->At4g35610          --------->ARR14(2)   --------->At4g35610                                 --------->ZAT2<----------ID1 <---------ARR14(2)   <---------ZAT14                               <------ZmHOX2a(1)              ------->TEIL         --------->ZAT14                  --------->ANAC58   <---------ZAT2---------->DOF2----------->RAV1(1)    <---------ATHB12 -----YAB1        --------->ANAC58   <---------STY1(2)  <-------TEIL  <---------CCA1(2)--------->WOX13(1)   gtttgtggaatgttttaggcatgccatagtagaggagctagctggttttgggccaaagtccatgtatccgacatatctgaaacactgctcaatcaaagtt  12593200                                                            --------->HSFB2a(2)                                                           --------->SPL7                                                           <---------LBD16                                                      <------------------SPL14                    --------->GLK1(1)            --------->ARR14(2)                    <---------GLK1(1)            <---------ARR14(2)                  <------ZmHOX2a(1)              <-----------GT1          ---------->DOF2             --------->GLK1(2)  <---------SPL7 ------>DOF2  ---------->DOF2   ----------->GT1  ------->TEIL--------->LBD16                  <------ >DOF2 <----------ID1          <---------------AtSPL8------>ZmHOX2a(1)                     ------>ZmHOX2a(1)   taagcgaatgggaaaagaaaggatttcaagtgagtggtacaatctgtgatgtatcctctcgtccggagagagaaacactctgcaaactgtctcctcgttg  12593300                                                                                               <-----                                                                                               ------                                                                                         --------->AHL20(2)        --------->At4g35610                                                             ----------->TBP       --------->ANAC58                                                       <---------AHL20(1)       --------->ANAC58                               ------------>CBF        --------->AHL20(1) ---MYB52(1)                          <---------ZAT14--------->YAB1           --------->ARR11(3)   tttgagggcaagctcaacattcttgtaagacgtttgtgagtgaagttaatggaaatgacaatgagcaagttttgctcaaatattttgactataaaatgtc  12593400                                                                 ----------->RAV1(1)                                                                 --------->AtMYB61                        <---------RVE1(1)                        <---------ALFIN1         <------ZmHOX2a(1)   <-----------GT1       <---------ANAC55(2)        <---------ARR11(3)       --------->MYB59 <---------GLK1(2)           <---------ANAC46<---------ALFIN1   <---------MYB46(3)  --------->ARR11(3)    --------->DAG2     --------->ANAC46   <---------ICU4  <---------TOE2(3)    <---------ARR11(3)   --------->SPL7    <-----------GT1--------->YAB1 --------- ------------AG   --------->TOE2(3)      --------->YAB1       --------->ANAC46--------->ARR11(3) ------>CBF     <---------ARR11(3)<---------ICU4   --------->ANAC55(2)    ---------->DOF2  <-------TEIL   aattttggttaggaccactatcttagatttttttcatcttcactcgtaaggctacgtattatttccaccacacatacaaagataatcactagattcatac  12593500                                            <-----------HVH21                                       <---------ARR14(2)                                       --------->ARR14(2)              <------------CBF        <---------GLK1(1)         --------->ANAC46             --------->YAB1          <----------DOF2            --------->ANAC58             --------->ATHB12  <-----------RAV1(1)              --------->ANAC58                   <-            <-------TEIL    <---------ARR11(3)               <-------TEIL                        ----     --------->SPL7         --------->GLK1(2)               --------->CCA1(2) <XXXXXXXXXXXXXXXXXXXXXMIR447C --------------->AtSPL8     <---------ARR14(2)       --------->ANAC58         ---------->DOF2 <------ >YAB1 <---------ALFIN1     --------->ARR14(2)       --------->ANAC58    ----------->GT1   <---------REM1(2)   ttatccgttccacattcattgtatatacaaaatctgtggcatttctggtcacttcaagtaagatacaagaaaaaatggataaaagatggagtcttcaagg  12593600                         ---------->DOF2                                             <---------HSFB2a(2)                    <------NtERF2                                                    <---------TOE2(3)  ------->TEIL     ------>NtERF2                             <---------AHL20(2)      --------->HSFB2a(2) --------YAB1     --------->ALFIN1                         <----------DOF2     <---------AHL20(2) ----->CCA1(2)   <---------MYB52(1) <-----------HVH21<---------GLK1(2)     --------->ICU4           < ---TOE2(3)----------->HVH21    <------NtERF2       <---------At4g35610 <---------YAB1     <---------ARR14(2)   tatgaatgctcttgtgaccggtggcactaaaggcatcgggtcagtctccattttagatgctcttttattgcattgtgatatttagttatggaagaactga  12593700                                                                                ------->MYC4                                                                                ------->MYC2                                                                                <-------MYC2                                                 ======================================MYC_MYB                                               --------->ARR14(2)               <-------MYC3                                               <---------ARR14(2)               ------->MYC3                   <-----------HVH21          <------ZmHOX2a(1)               ------->MYC3                <---------ANAC58         <---------ANAC46                     <-------MYC3                <---------ANAC46         --------->ALFIN1                    --------->TGA1a       <-            <---------ANAC58           <---------ANAC46                      <---------TGA1a       --            <---------ANAC58        <-----------RAV1(1)                    <---------ALFIN1        <-      <---------ANAC58            --------->At4g35610                   --------->ZAT14            --      <---------ANAC58            <---------At4g35610                   <---------ZAT14   <---------O2      <---------ANAC46            <---------ZAT2 <------------AtMYB77   <---------ZAT18   --------->O2 ---------YAB1  <---------ANAC58 --------->GLK1(2)----------->GT1       --------->ZAT18 --------->CCA1(2)   ctatgtttgtgtgtgtgtgcgtgtcatgaacagggaagctgttgtggaggaactgtcaattttgggagcaagagtccacacatgtgctagagacgagact  12593800               --------->ANAC55(2)               <---------ANAC46                                         <---------ANAC58               <---------ANAC55(2)                                      <---------ANAC46               <---------ANAC58          --------->ANAC46               <---------ANAC55(1)               <---------ANAC55(1)       --------->At4g35610            --------->ANAC55(2)           --------->DOF5.7(2)           <---------At4g35610        <----------DOF2    --------->HSFB2a(2)       ---------->DOF2                 <---------O2 --------At4g35610        --------->ANAC58           <---------CCA1(2)  <---------ANAC58 ------->At4g35610        --------->ANAC58<-----------HVH21   --------->O2  --------->ANAC58 --------ZAT2  <---------ANAC58--------->DAG2  <---------ALFIN1--------->HSFC1(2) ------->ZAT2 <-----------------AGL1   <-----------RAV1(2) ----------->HVH21--------->ANAC58   cagcttcaagaacgtttacgtgaatggcaagaaaaagggtttcaggtcaccacttctatctgcgacgtttctttgcgtgagcaacgagagaaactcatgg  12593900                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                      ------>NtERF2                                                                     --------->LBD16                   --------->ANAC58                                 --------->LBD16         ------>MYB46(1)                   --------->ANAC58                                 <---------LBD16         ------>MYB83                   --------->ANAC46  --------->TOE1(1)             <---------LBD16        <---------MYB59        ------>ZmHOX2a(1)            --------->ANAC46              --------->LBD16        --------->AtMYB61    <---------ARR14(2)               --------->TOE2(1)          ------>ZmHOX2a(1)    --------->ANAC58    --------->ARR14(2)              ------>ZmHOX2a(1)          <---------ALFIN1      --------->ANAC58   <---------MYB52(1)           <---------ARR11(3)       <---------GLK1(2)     --------->GLK1(1)    <   aaaccgtttcctctctcttccaaggaaaactcaacatcctcgtaagtgtatacatattagcttctcctccccgggcttgggatttacaagaaccaaacca  12594000               <----------DOF2               <---------DAG2                               <---------ARR11(3)               --------            <---------AHL20(2)                   <------MYB83                                <-------            <-----------GT1                      <------MYB46(1)                           --------->DOF5.7(2)        --------->AHL20(2)        <---------ARR11(3)        --------->ARR11(3)            --------->TOE1(3)        <---------AHL20(2)        --------->ARR11(3)       <---------CCA1(2)              --------->TOE2(3)  <---------ANAC46              --------->ICU4  <---------AtMYB61                        ----------->GT1 ---------ANAC46              ---------->DOF2<---------MYB46(3)                    --------->ALFIN1   tgttgtgtttttaattactttttttttttttgtaaagatgtttttagttgttggtctatacatatcttatatataggtgaacaatgtgggaacgttaatg  12594100  Previous    Next  AGI:  At2g29280.1    Description:  pseudogene, tropinone reductase, blastp match of 46% identity and 2.4e-09 P-value to SP|P50165|TRNH_DATST Tropinone reductase homolog (EC 1.1.1.-) (P29X). (Jimsonweed, Common thornapple) {Datura stramonium} Range:  from: 12592966    to: 12593407    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g29290.1    Description:  tropinone reductase, putative / tropine dehydrogenase, putative. similar to SAG13 (Senescence-associated gene 13), oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G29350.1); similar to tropinone reductase [Cochlearia officinalis] (GB:CAO02390.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 12593575    to: 12594804    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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