Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------TOE1(3)      <---------TOE2(3)      --------->DAG2  XXXXXXXXXXXXXXXXXXXXX>MIR393A/B ---------HVH21 ------O2                                                      <----------DOF2 ----->ANAC58                                                  <---------DAG2 ----->TGA1a                                                ------->TEIL ------TGA1a                                             --------->ANAC55(1) ----->ANAC58                                           <-------MYC3 ----->O2                                               ------->MYC3 ----->ANAC46    --------->ATHB12           <---------ICU4  <-----------GT1 ----HVH21       --------->YAB1       <----------DOF2--------->AtMYB61    <---------DAG2         ---- --DOF2   <-------TEIL             <-----------GT1   <---------ALFIN1     <----------DOF2        ----   cgtcccataaggttcacattgattactctaatctatttcactttcaagattaccaccacatgtaacttttccattccttttccacatttatctcttaaac  12564700                                                  ------>MYB46(1)                                                  -------->P                                                  ------>MYB83                                                <---------MYB111(2)                                                <---------MYB46(2)                                                <---------MYB59                               -------                                                --------->AtMYB61                             -------                                                <---------MYB111(1)                           -------                                                --------->MYB46(3)                         --------->ZAT14                                                <---------MYB55(2)                         <---------ZAT18                                               --------->MYB46(3)                          <---------ZAT14                                              -------->P      <---------MYB59          <---------ICU4      <----------DOF2                      --------->At4g35610--------->TOE2(3)       <---------ATHB12 ----->TOE1(3)                             <---------At4g35610--------->TOE1(3)  <---------ANAC58 ----->TOE2(3) <-------TEIL         <-----------GT1 ------->GAMYB                <---------ANAC58   <   ctcaaacactttcaagtttcatcttctctctctcttattaacttcatctaccaaccctacttaacctaaaaccattttcaattgcttaatcagtccacac  12564800                     <---------ALFIN1                    --------->ZAT18                    <---------ZAT14                    --------->ZAT14             --------->ANAC55(2)             <---------ANAC55(2)             <---------ANAC46             <---------ANAC55(1)      --------->AHL20(2)  <---------MYB52(1)  ------->TEIL--------->LBD16                                                  --------->AHL20(2) -->ANAC58   <---------ANAC58                                               ----------->GT1 -->ANAC58   <---------ANAC58               <-----------GT1         ------->TEIL        <-----------GT1 -->ANAC46  <---------LBD16      <---------HSFB2a(2)    <---------ICU4--------------->AGL15 ---------ZAT18----------->HVH21 --------->HSFB2a(2) --------->HSFB2a(2)   <---------TOE2(3)   aatgcacataaatttccgtgaccacactgttcgttttagaagaaaaaaaccacttccaaaattgcatatgtaccaataagataaaatgttttactcattc  12564900                     --------->ZAT6                  <---------ICU4              --------->AHL20(2)                                               --------->At4g35610              <---------AHL20(2)                                             --------->YAB1       ------>MYB83 <---------TOE2(3)                                       <---------ATHB12       ------>MYB46(1)           <----------DOF2                           ------>MYB83 ---------->DOF2     --------->TOE1(2)          <---------ANAC58       --------->ANAC58    ------>MYB46(1)   <-------     --------->TOE2(2)          <---------ANAC58       --------->ANAC58   --------->WOX13(1) <-------   aaatagacctacgagattaattaagactaggtttgctttgggctaaaactggcccataagctatggcaattgaaaccaatcagattacaaaaaaggcttg  12565000                                       --------->ANAC55(2)                                       <---------ANAC55(2)                                       ----------->GT1                                      <---------TOE2(3)                                     --------->MYB52(1)                                ------------>CBF                          --------->AHL20(2)                        --------------->AGL15                        <---------------AGL15                       <-----------------AGL3                       ----------------->AGL2                       <-----------------AGL1              ------>MYB83<---------ATHB12  --------->ICU4            ----------->GT1 --ANAC58     ------>MYB46(1)  ----------->GT1                   ------------>CBF --ANAC58   <---------MYB59<---------AHL20(2)                ----------->GT1   tcaagaagatgagaccgaacatgttccaataaatggcaataacgtaattctcaaaacctctgagggtaacaatggaaaaacaaaatgaagtgagtccgat  12565100                                                                                                  ---                                      --------->ANAC58                                        -------                            --------->RVE1(1)                                          <----------DOF2                            *TSS      --------->ANAC58                                ------>ZmHOX2a(2)                           <---------ARR11(3)                                       --------->ARR11(3)                           --------->GLK1(2)                                        <---------ARR11(3)                           --------->ARR11(3)    <-----------GT1             --------->ANAC58 <------         ----------->GT1  <---------GLK1(2)<---------ALFIN1                  --------->ANAC58 -------   atagctagggctcgttaaaaactcttcaaaatctctgtggaagccccattttcacatctaaatctcacaaatctctctcaagcttcgatctttcttctag  12565200                                               <---------ANAC46                                               <---------ANAC58                                               <---------ANAC58                                              <---------LBD16                                           <---------ANAC58                                           <---------ANAC58                                        <---------ARR14(2)                                       <-------GAMYB                                            <----          <---------ANAC58           <---------DEAR3(1)                                        ------          <---------ANAC58          <---------MYB52(1)                                         <-----   --------->STY1(2)           <-----------HVH21                                               ------   <---------STY1(2) --------->TOE1(3)<---------DEAR3(2)                                       ------ ------>CCA1(2)      --------->TOE2(3)<---------MYB46(3)                                 <----------DOF2 -->HSFC1(1)     --------->AtMYB61 --------->LBD16 <--------P  <---------ATHB12--------->ARR11(3) ---HSFB2a(2) --------->HSFB2a(2) <---------DEAR3(1) --------->MYB52(2)        <---------ARR11(3) -->HSFB2a(2) <---------HSFB2a(2)<---------LBD16--------->LBD16<------ZmHOX2a(2) ------>ZmHOX2a(2)   agacgagctagtgcttccacaaaccctaaactatgtccggcggtttcttccgggttagttttccgatcaattttctcaattgatctctcatcttttagat  12565300                                                                                        <---------GLK1(2)                                                                                        --------->ARR14(2)                                                                                        <---------ARR11(3)  <------ZmHOX2a(2)                                                                     <---------ARR14(2) --------->ARR14(2)                                                                <---------ZAT2 --------->AGP1                                                                    --------->ZAT2 <---------ARR14(2)                                                              ------>NtERF2 --ZmHOX2a(2)                                                                   --------->DEAR3(1) --->AGP1                                                                     ------>NtERF2 ----ARR14(2)                                      <----------DOF2            <---------At4g35610 --->ARR14(2)                                <-----------GT1          <---------ZAT18  <------ZmHOX2a(1) --->ARR11(3)                             --------->YAB1       <----------DOF2--------->LBD16   ccagatcgatgcaattcaaaagttttgttgaagttcccatggtttaataacttctttgttttgagcttttagggtacttccgccgagcaggatactcggt  12565400                                                      --------->ARR14(2)                          ---          --------->ANAC58                            <---------ARR14(2)    --------->ZAT14   -------          --------->ANAC58                            --------->GLK1(2)     <---------ZAT14 <--------      --------->ANAC46    --------->ANAC58           <---------GLK1(2)      --------->ZAT18 <--------      --------->ANAC58    --------->ANAC58 --------->LBD16                  <---------ZAT18<---------      --------->ANAC58  ---------->DOF2  <---------LBD16               <----------DOF2   <---------AHL20(2)   tttctaacaagcaagctaaattgatgaaaagccagaaatttgctccggagttagagaatctggtgagttttctctttgtgtactcgtccattttaacgat  12565500                                 <-------TEIL                       <---------AHL20(2)                      <---------------AGL15                      --------------->AGL15                   <---------AHL20(2)   <---------ARR14(2)--------->ANAC55(2) -------->GT1      <-----------GT1                                                            <------ -->ATHB12 <---------ANAC58     --------->CCA1(2)                                             ------- -TOE2(3)  <---------ANAC58     --------->GLK1(2)                               <---------LBD16 -TOE1(3)  <---------ANAC46     --------->ARR14(1)           <<<<<<<<<MYB98<---------YAB1<----------DOF2 --GT1   <---------TOE1(2)   <---------TOE2(3)        <-------TEIL         <---------TOE2(3) --------   ttgtgaattcgtagcttgaatttacttaattgagattcgattaccagataattcgatacatatgttactatgaaattaagtttggggagggcttaatgat  12565600  Previous    Next  AGI:  At2g29210.1    Description:  splicing factor PWI domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO21603.1); contains InterPro domain Splicing factor PWI; (InterPro:IPR002483) Range:  from: 12565128    to: 12569425    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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