Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->AHL20(2)                                                <---------AHL20(2)                                          --------->AHL20(2)                                 --------->GLK1(2)<---------TOE2(3)                                 --------->ARR14(2)                                 <---------ARR14(2)                                <---------GLK1(2)---------->DOF2                    --------->ANAC58      --------->YAB1                                  <----------DOF2           <---------ATHB12 ---------->DOF2 --------->ICU4         <---------WOX13(1)  --------->GLK1(2)   <---------ICU4   --------->ANAC58   --------->YAB1       --------->ALFIN1 <---------AHL20(2)>>>>>>  <---------ATHB12  --------->ANAC46----------->GT1  ---------->DOF2        --------->AHL20(2)<------   actaatcaattcaatgaggctcaaggaacttaaagaatctgtaataaaaattaaagaaagaagtggaagattgatatatataatacgagtttctttatac  12534400                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                            <--------                                                                                            <-------GAMYB                                                                                           <---------ANAC46                                                                                        <-----------GT1                                                                                      --------->HSFC1(2)                                                                                      <---------HSFB2a(1)                                                                                      <---------HSFC1(2)                                                                                 --------->LBD16                             <-----------GT1                                    <---------HSFB2a(2)                         --------->ATHB12                                       --------->LBD16<-----                        --------->ICU4                            --------->At5g28300 --------->HSFB2a(1)                        <---------YAB1--------->ATHB12         <---------LBD16  ------>ZmHOX2a(1)                      <---------ANAC55(2)               ------>ZmHOX2a(1)      <---------LBD16------- <<<<<<<<<EIN3        --------->ANAC55(2)         <---------ARR11(3)           --------->TOE1(2)  --- >>>>>>>>>>>LFY      <-------TEIL  <----------DOF2--------->ARR11(3)  --------->ZAT6 <---------KAN4(2) -----GT1   <---------YAB1 <---------WOX13(1)  <---------GLK1(2)<---------ANAC46--------->HSFB2a(2)<-   caatgtatagaaatgttattggatacatgattaacaactttgatttgtagattatctccttctcttgcggtaactctaggtcctgggaattttccgttga  12534500   <---------YAB1   --------->ICU4 ---->HVH21 -->WRKY38(1)                                            --------->ANAC58 -->WRKY12                                      <---------At4g35610 --MYB52(1)                                    ------->TEIL -At4g35610                                    --------->ARR14(2) ----WRKY18(1)         <---------ALFIN1        <---------ARR14(2) -->WRKY45        --------->AtLEC2        <---------At4g35610          --------->ANAC55(2)         -- ------>ANAC46  <---------ANAC58          --------->At4g35610          <---------ANAC55(2)      ----- ----------HVH21<---------ANAC58          <-------GAMYB  --------->ANAC58                      <-----   ccgtcacgattgtttttgtcttgcacaaccttgtgatgtttttcagttgaatctgccagacgaaaaatagaataagtgatttcaaatgtgtatgagtatg  12534600                                        ---------->ID1                                --------->AHL20(1)                                             ------                                <---------AHL20(1)                                    <---------ANAC46                         --------->ANAC58                                             <---------O2                         --------->ANAC58                         <-------TEIL        --------->O2 --          --------->AHL20(1)    <---------AHL20(2)            <---------AHL20(2)      --------->bZIP60(2)          --------->AHL20(2)   --------->YAB1                 <---------ICU4         --------->LBD16          <---------AHL20(2)   <---------AHL20(2)         --------->AHL20(2)         ------>NtERF2 <- ------->AHL20(2)       <---------TOE2(3)                 <---------AHL20(2)        <---------ANAC58 ---->ATHB12           --------->MYB52(1)   ---------->DOF2  --------->AHL20(2)     <---------ANAC46< ----YAB1--------->AHL20(2)    --------->AHL20(2)        --------->AHL20(2)         <---------ANAC58<   attaaacaaaaaaaaattgagaggctaacgaaattatattttgtcccaaagtgagactaattaataaatacatcgaattggtagtgccgcgtgattcctg  12534700                                                                =====================================                                                                --------->O2                                                                <---------O2                                                                --------->ANAC58                                                                --------->ANAC55(1)                                                                <---------ANAC55(2)                                                                --------->ANAC55(2)                                                                --------->ANAC46                                                                --------->ANAC58               ----------->GT1                                  --------->bZIP60(2)  --------->At4g35610                                           <---------TGA1a >ZmHOX2a(1)   <---------REM1(1)                             --------->TOE2(2) ------->At4g35610                               --------->ARR11(3) --------At4g35610                               <---------ARR11(3) ---------GLK1(2)     --------->MYB52(1)       ----------->GT1  --------->TGA1a ---------ARR14(2)  <---------MYB52(2)  ----------->RAV1(1)  --------->TOE1(2)                      -   cagatgctgcatcgatgttgtaactaatggcaaatagaaatgccacaagaagataattcaaaacccacgtaaccatgttcaatatttgtttgaatattga  12534800                                                                             <---------ANAC46                                              <-----------TBP              ----------->GT1  ----------->GT1                             --------->AHL20(2)          --------->ALFIN1 ==========bZIP_DOF     *TSS                <-----------TBP      <---------At4g35610 --------->DOF2 <---------CCA1(2)         <----------DOF2    <---------REM1(1)   aggaaagttatatgttttatatccaaagtatgaaatatggttttctttttatatagttttctggtgaagctctcaagtggtgtatttgaaaatagaggga  12534900                                                ----------->GT1                                                <------MYB83                                               --------->MYB111(1)                                               --------->MYB111(2)                                               --------->MYB46(2)            --------->CCA1(2)                  <---------MYB46(3)            --------->AHL20(2)           <---------AHL20(1)                 <---------MYB55(1)             --------->AHL20(1)           --------->AHL20(1)                 <--------P                     <---------AHL20(2)           <---------ARR11(3)               <---------MYB46(3)      ----------->GT1          <-----------TBP            ----------->GT1          --------->YAB1<---------AHL20(2)      ------------>CBF               <---------ZAT6        --------->YAB1 --------->YAB1 <---------ARR14(2)      --------->ZAT18               <------MYB83<------MYB46(1)   ---------->DOF2        --------->ARR14(2)      <---------ZAT18               <------MYB46(1)       --------->AHL20(2)--------->AHL20(2)   <---------ANAC46               <--------P--------->ATHB12--------->AHL20(2)      <---------ANAC46X   gaatgttgtgcaatatataagtgagagaggcaaatggtagggttaatggttggtaacaaaataaaaataaaagtaaaaataatttgtagtgtattcggat  12535000                                                       <------MYB46(1)                                                       <------MYB83                              ----          <---------YAB1                           --------->ATHB12                           <------    --------->ATHB12                               <---------MYB46(3)                     <---------ZAT18   --------->ICU4          <---------ZAT6 <---------MYB46(3)--------->MYB52(1)           <---------ANAC58   <---------YAB1  <---------YAB1     <---------YAB1 <--------P                          <---------ANAC58 XXXXXXXXXXXXXXXXXXX>MIR1888    <---------TOE2(3) <---------ATHB12    --------->GLK1(1)  <---------ANAC46   aagttatgatttatgaataagatgatttagtgttgatgttatagttgttccaatggttggacaaaccgagtgaattccaagttaactaattgtgtgcttt  12535100                                                      --------->AHL20(1)                                                      <---------AHL20(1)                                                      --------->AHL20(2)                                               -------->HAHB4                                               --------->ATHB12    <---------AHL20(1)                                          --------->MYB46(3)     <---------AHL20(1)                                         ------>MYB83 <---------AHL20(2)                                         ------>MYB46(1)  --------->AHL20(2)                                        ----------->RAV1(1)<---------AHL20(2)                                     --------->SPL7<---------AHL20(2)                                   <---------SPL7<---------WOX13(1)--------->AHL20(1)        --------->ICU4            <---------ANAC58<---------AHL20(2)        <---------YAB1            <---------ANAC58--------->AHL20(2)       --------->CCA1(2)      --------->YAB1             --------------->AtSPL3  <---------YAB1   --------->ARR11(3)   <----------DOF2             <----------DOF2 ----------->GT1   --------->AHL20(1) ----->YAB1<---------YAB1   --------->ANAC58  <---------ATHB12  --------->AHL20(2)      <---------GLK1(2) ----DOF2<---------ICU4     --------->ANAC58  --------->ICU4  --------->AHL20(2)      ----------->GT1   aataactttgatgattatagctctacatacaagctttcgtaccaacaaatgattaatttattaaaaatatatattagatatataagaacagataatcgct  12535200                                                                             --------->DAG2                                                                            --------->DAG2                                                                 ---------->DOF2                                                            ---------->DOF2---------->DOF2               --------->YAB1                             ------------------------>ANAC81     -------         ----------->RAV1(1)                       <----------DOF2    ---------->DOF2<---------TOE2(3)   agtcgagacaacaacaaaaataatcccatctgtttctaagggagtgatgttttctttgacaaaaaagaaaagaaaagaaaagggactgatgttttagtat  12535300  Previous    Next  AGI:  At2g29130.1    Description:  LAC2 (laccase 2); copper ion binding / oxidoreductase. Identical to Laccase-2 precursor (LAC2) [Arabidopsis Thaliana] (GB:O81081); similar to LAC17 (laccase 17), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G60020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60069.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69151.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69174.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011 Range:  from: 12531966    to: 12534824    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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