Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 <---                                                                   <---------YAB1                ----                                    <-----------TGA1    <---------ARR14(2)                       <---                         ---------->DOF2                --------->ARR14(2)       --------->AHL20(2)                 --------->ZAT14    <-----------HVH21  <----------TaMYB80<----------DOF2    ------>ZmHOX2a(2)   atacacttggtttttgaagtatagtctaaaagataaatcgtcaccaagactcttagcatatacccccatatgatactttgatttttaatactgatctaaa  12511600                                                                            ----------->GT1                                                                            --------->ANAC55(2)                                                                            <---------ANAC55(2)                                                                           <---------ICU4           -                                                                          --------->ICU4      <------                                                                  --------->LBD16           ---------                            --------->At4g35610    <---------AHL20(1) <---------MYB52(2)   ----------                    ----------->GT1          --------->ANAC55(2) --------->ANAC58          ----------   <-----------HVH21--------->YAB1           --------->ANAC58    --------->ANAC46        <---------ICU4 ----->AHL20(1)--------->AHL20(1)            --------->ANAC55(1) --------->RAP2.6(2)  --------->YAB1- ------AHL20(1)<---------AHL20(1)            <---------ANAC55(2) ------->GAMYB     --------->WOX13(1) ----->ARR11(3)<---------AHL20(2)            --------->ANAC46    --------->ANAC58 --------->AHL20(2)< ------AHL20(2)--------->AHL20(2)            --------->ANAC58   --------->MYB46(3)<---------AHL20(2)<   atattggtcacattcaataaaatagtaattagctaaaccatgtctatacgtaatatgtttcattcaaccgcaactaataagtaataaatcaaaatgacgg  12511700                                     ----------->HVH21                                   --------->At4g35610                                   --------->ZAT2     --------->ANAC58              <---------ZAT2     --------->ANAC58              <---------At4g35610 -------->At4g35610                ----------->RAV1(2)    <---------AtLEC2 ---ANAC46                   ----------->RAV1(2)    <---------ARR14(2) >MYB52(1)                  ------->TEIL            <---------ARR11(3) ->TGA1  --------->ANAC58 ------->GAMYB             --------->ARR11(3) ->HVH21 --------->ANAC58<---------MYB52(2)         <-----------ARR10   <---------ANAC58 -------->ZAT2           --------->MYB46(3)         --------->ARR14(2)  <---------ANAC46 ---------At4g35610    <-----------GT1             <---------ARR14(1)   <---------ANAC58 ---------ZAT2         --------->MYB52(1)       --------->ZAT6 <---------GLK1(2)             --------   gaagctgaagcaagacatagagaagtaacgaacctgcagctgaagcctgaacagtatcttccatggaatctctaacgtgaagcgtaagtcttgtgaggta  12511800                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                    --------->ARR11(3)                                                    <---------ARR11(3)                                                    <---------ARR14(3)                       --------->ARR14(2)           <---------ARR14(2)                      <-----------HVH21             --------->AGP1                     ----------->HVH21              --------->ARR14(2)                 <---------GLK1(1)                  <---------AGP1            --------->REM1(2)         <---------HSFB2a(2)          --------->LBD16             --------->HSFB2a(2)         <---------ANAC46          <---------YAB1   --------->ARR14(3)                    ------>ZmHOX2a(1)        ------>ZmHOX2a(2)         <----------DOF2   <-----------ARR10            <---------ARR11(3)      --------->ARR14(2)  --------->ANAC58         <---------CCA1(2)        =====================HOX2a_HOX2a      <---------ARR14(2)  --------->ANAC58        ----------->ARR10         <------ZmHOX2a(2)   <---- --->GT1<---------LBD16<---------ARR14(2)   --------->ALFIN1               --------->ARR11(3)<-------   atttggatgatccgcgtagaaatcggacacggccatctttatagaagtgaggcagatcttggaaaatgttgtattgagatcaagaactactcctactttg  12511900                             ------->GAMYB                            <---------MYB55(2)                            --------->MYB46(3)                                              <--------                           ------>MYB83                                                    <---------YAB1                           -------->P                ---------->DOF2                     <---------ICU4                    ------>ZmHOX2a(1)             --------->ANAC58    ----------->GT1    --------->YAB1          <------MYB46(1)--------->AtMYB61     --------->LBD16     --------->DAG2       <---------YAB1 <-----------GT1 ---------->ID1   <---------ATHB12--------->ANAC58--------->DAG2      --------->YAB1 --------------------ANAC81------>MYB46(1)    --------->RAP2.6(2)---------->DOF2      <---------ICU4 ---DOF2  <------MYB83  --------->MYB46(3)---------->DOF2    <---------------AGL15 --------->YAB1   atttcacttgtttggttttgtcctaaaccaacccccatcaacaaaaaaccgcaaacaaagtaactcaaaaaggtgttattagttttcatcatcataatcg  12512000                                                                                 <---------ARR11(3)                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)           ----                                                                  --------->HSFB2a(1)          <-----                                                                  <---------HSFB2a(1)        --------                                                    <-----------TBP<------ZmHOX2a(1)       ----------                                                  <-----------TBP --------->HSFC1(2)       <---------YAB1                                             ------>ZmHOX2a(1)    <---------HSFC1(2)  --------->YAB1                   --------->ANAC55(2)   <-----------GT1<<<<<<<<<<<<<<<<<LFY     <---------GLK1(2)               <----------DOF2       <----------DOF2<---------AHL20(2)           --------->ARR11(3)               <---------DAG2        <---------DAG2 --------->AHL20(2)------>ZmHOX2a(2)  --------->YAB1 -ICU4    <------ZmHOX2a(1)<----------DOF2   ================================HOX2a_HOX2a<---------YAB1   ccccaaaactgaggagactttatgtgattctttaacttacttttttcctgttatatatatacagtggaaggatcggtttgaaagatacttataatcaatg  12512100                                                                            --------->WRKY45                                                                            --------->WRKY38(1)                                                                          --------->REM1(2)--------->AHL20(2) ------>DOF2                          ---------->DOF2                     <-------GAMYB--------->AHL20(2) ----ATHB12                          ------->GAMYB                  --------->DAG2     <---------AHL20(2) ->WOX13(1)            <------------CBF                            ---------->DOF2    --------->AHL20(2) -->CBF               --------->DAG2--------->ANAC46   <---------AHL20(2)--------->ALFIN1  <---------AHL20(2)   aaagactttgaaatactatgccaaaaattggtttctcaacgaaagagacatatcgatttttttttaaaaaaaagtgtgttgactagaaattaataaaact  12512200                                                                                    <---------ARR14(2)                                             --------->ANAC58                       --------->ARR14(2)                                             --------->ANAC58                 <-----------GT1                                           ---------->DOF2                <---------AHL20(2)                                      <----------DOF2                    --------->AHL20(2)   <------                           --------->At4g35610                           <---------AHL20(2)  --------                    <----------DOF2   --------------->AGL15      <---------CCA1(2) ------>MYB83       ----------->GT1     <---------At4g35610                 --------->ANAC46    ------>MYB46(1)---   ggtttgaaagagtcaaatgaggcttttgcagatgaattctctttgaaaagcaaactacaaaatacccataacttattaaataaccaaatcgtctatttta  12512300                                                                   --------->ATHB51                                                                   <---------ICU4                                                                   --------->ATHB12                                                                  <---------YAB1                                                                --------->YAB1                                                               <---------YAB1                                                              <---------ARR11(3)                                                              --------->ARR11(3)                                                              <XXXXXXXXXXXXXXXXXXXXMIR869.1                                                           --------->YAB1                                                         --------->AHL20(2)           ------>ZmHOX2a(2)                             <---------AHL20(2)           <---------AHL20(2)           --------->ANAC58                              <---------AHL20(1) <---------ICU4        <------ZmHOX2a(1)        <----------DOF2         --------->AHL20(1)<---------AHL20(2)      <---------TOE2(3)          <---------DAG2        <---------YAB1      --------->ICU4 ---AHL20(2)           <----------DOF2      <---------YAB1<---------YAB1   <---------ATHB51 ->AHL20(2)--------->ANAC58   <-----------GT1  <---------WOX13(1) --------->ICU4   ----------->GT1 ------>AHL20(2)   <----------DOF2        --------->YAB1--------->YAB1     --------->AHL20(2)   taaaatataaggatcgcaattctttcttttttttacttttagtattgtaattgacatattataatatcataattgaaataattaagagttaattgtgcaa  12512400                                     <---------GLK1(1)                                     --------->GLK1(1)                                    <---------ARR14(2)                                   <------ZmHOX2a(1)                        ------>ZmHOX2a(2)                       ===================HOX2a_HOX2a              <----------DOF2    <---------TOE1(3)              <---------DAG2     <---------TOE2(3)         <-----------GT1==================HOX2a_HOX2a      --------->TOE2(3)<------ZmHOX2a(2)    --------->GLK1(2) <---------ARR11(3)                                                    ---------   <---------GLK1(2)  --------->ARR11(3)  <----------DOF2                 <-------TEIL      --------- ----------->ARR10    --------->AGP1--------->ARR14(2)       <---------TOE2(3)              ---------   aataagattcttaaccctttttgagatctatttttgaggatagcctttctgaagaaaaaaactaatgttttatacatccatcccatgctaatgcacgaga  12512500  Previous    Next  AGI:  At2g29100.1    Description:  ATGLR2.9 (Arabidopsis thaliana glutamate receptor 2.9). Identical to Glutamate receptor 2.9 precursor (GLR2.9) [Arabidopsis Thaliana] (GB:O81078); similar to ATGLR2.2 (Arabidopsis thaliana glutamate receptor 2.2) [Arabidopsis thaliana] (TAIR:AT2G24720.1); similar to ATGLR2.8 (Arabidopsis thaliana glutamate receptor 2.8) [Arabidopsis thaliana] (TAIR:AT2G29110.1); similar to ATGLR2.7 (Arabidopsis thaliana glutamate receptor 2.7) [Arabidopsis thaliana] (TAIR:AT2G29120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63099.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75545.1); similar to unnamed protein product [Viti Range:  from: 12508169    to: 12511989    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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