Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->AtMYB61        --------->DEAR3(1)        <---------ALFIN1       --------->MYB46(3)     <---------ALFIN1     --------->AtMYB61  --------->ZAT6 ---ZmHOX2a(2)                                        --------->ANAC58 ---->ARR14(2)                                        --------->ANAC58                     ---------- -----ARR14(2)         --------->TOE2(3)            <--------P                     --------->ARR14(2) -->DEAR3(1)  --------->SPL7                      <---------ANAC55(2)              ------->TEIL   --- >LBD16<---------MYB55(2)                        --------->MYB59  <----------ID1   <---------ARR14(2) -At4g35610 <---------SPL7                      <-----------RAV1(2)                --------->GLK1(2)<   tctaacaccaccaccgtacaaaaatccctaatttcacatataaacaaaaatcaggtaagcaaaaaaaaaaaacaaattgagaacgaatctgagaaggaat  12500000                                                               <---------YAB1                                                               <------ZmHOX2a(2)                  ------->GAMYB                               <---------ARR11(3)                 <---------MYB111(1)                          --------->ARR11(3)      --------->YAB1                                 <---------HSFB2a(2)     ----------->GT1                                 --------->HSFB2a(2) --------->AHL20(2) -------->P                   --------->TOE1(3)      --------->AtLEC2 -------------->ANAC81--------->TOE2(3)         <---------At4g35610  <---------YAB1 ------>WOX13(1) --------->MYB46(3)            <---------TOE2(3)    <-----------HVH21 ---------ATHB12 <---------MYB52(2)            <---------TOE1(3)--------->ATHB12   ---------->DOF2   caatgaaatgaaaataacaactaacctttgaacgagaaatggagcgattaagcttagagaagaagatcattgtcatacaaaatcacaaagaacaaaacta  12500100                                              --------->ZAT2                                     ------>ZmHOX2a(2)                                    --------->CCA1(2)                                    ============================HOX2a_HOX2a                                   --------->ARR14(3)                                   <---------ARR14(2)                                   --------->GLK1(2)                                   --------->ARR11(3)                                   <---------ARR11(3)                                   --------->ARR14(2)                                   <---------ARR14(3)    <------ZmHOX2a(1)       <---------YAB1                      ----------->GT1===========================HOX2a_HOX2a<---------AHL20(2)                 <---------AHL20(2)<---------AGP1       ----------->GT1    <---------YAB1                --------->YAB1   ----------->ARR10      <----------ID1 <----------DOF2               <---------------AGL15<------ZmHOX2a(2)  ----------->GT1 <---------DAG2        --------   agttcgcataatagtttataaaaatggtgaaatcgaagatctgaaacgagcttagaagaggaaaaaatgcaaacttttttattgtgtttgtggaataaaa  12500200                                                       <---------ANAC46                                                    <---------WOX13(1)             --------->ARR11(3)                                                  --------->ATHB12                 <---------ARR11(3)                                          <---------TOE2(3)                   --------->AHL20(2)                                          <---------TOE1(3)                   <---------AHL20(2) ->AHL20(2)----------->GT1   --------->CCA1(2)   <---------YAB1 ---------->DOF2   --------->RVE1(1)   tcaaacagaagaaatgaaaaatccaaacaagataagaagaaattagggtttttgattgggggaaataaaagtttgggttttttaatatctgaagtttatc  12500300                                                              *TSS                                                              --------->GLK1(2)                                           ------->TEIL      <---------ARR14(2)                   <--                                     --------->GLK1(2)       <---------GLK1(2)                    ---                                ---------->DOF2              --------->ARR14(2)                   ---                        ---------->DOF2  --------->ZAT14   ----------->ARR10             <---------ICU4                     <-----------HVH21   <---------ZAT14<---------ANAC46                <---------AHL20(2)   gagagaagagaaggtttatgaaatgtcaaagacaaaaagactctgtacttgttgtgttctgtagattctcttgaaccggttttgttctaaataatgtccg  12500400             --------->MYB52(1)             -------->P                 <-------TEIL           <----------DOF2           <------MYB83          <---------ANAC58           <------MYB46(1)          <------------CBF          <---------ANAC58          --------->MYB59         --------->AHL20(1) -------ARR14(2)           >>>>>>>>>>>>>>>>>LFY             --------->ARR11(3) ------>ARR14(2)          <-----------GT1       <---------MYB59      <---------ANAC46             --- ------>GLK1(2)          <XXXXXXXXXXXXXXXXXXXXMIR849   <-----------GT1   --------->HSFB2a(2)<--------   aatccaacttgtgcttaccggtcttattaaaccagtgtttggttcataggcctaattttacatatattgggccttggagaacatatgggcatagcttttg  12500500                                                                                            ------->GAMYB                                                                                            ---------                                                                                           --------->MYB46(3)                                                                                          -------->P     ----------->GT1                            <---------AHL20(1)                     <---------MYB52(2) <---------AHL20(2)                             --------->AHL20(2)        <-----------------AGL1 --------->AHL20(2)      <--------P             <---------AHL20(2)    --------->YAB1--------->ZAT18 ------>YAB1  --------->DAG2        <---------GLK1(1)            --------->MYB46(3)<------ZmHOX2a(1) --DOF2      ---------->DOF2--------------->AtSPL3              ------->TEIL   ---------->DOF2 ------   tcataaattgaaaataaaagtgaagaggtagccgtagcatatcagtttattttattttcagtaatgaaccaatattaactaaaaaggacactaaccatca  12500600                                                                                               ------                                                                                               <-----                                    <---------TOE2(3)                                          ------                                    <---------YAB1                                            <------                                  <---------ICU4                                              -------  ------->GAMYB                   --------->YAB1                                       --------->AHL20(2) --------->ANAC46          ---------->DOF2                                   <---------ICU4 --------- >YAB1                  <---------TOE2(3)     <----------DOF2               --------->ICU4 <---------ATHB12 --->YAB1--------->At4g35610     --------->ICU4                    ---------->DOF2   <----------DOF2   tcaacgaaattatctgcattgttgttaatgaaagaattatggttctatctttttttttttttttttggctaaagaagaattatggctctttaaatcataa  12500700                                                  --------->YAB1                                                  ----------->GT1                                         --------->AHL20(2)                                       <---------AHL20(2)                                       --------->AHL20(2)                                     <---------AHL20(2)                          <-----------GT1<---------AHL20(2)                         <---------AHL20(2)      <---------YAB1                        --------->AHL20(2)   <---------AHL20(2) --->ATHB12   --------->YAB1         --------->AHL20(2) ----ICU4     <---------ICU4       <---------AHL20(2)    <---------YAB1 --->ATHB51  <---------AHL20(2)    --------->AHL20(2) <---------AHL20(2) <---------MYB59 ---YAB1  --------->AHL20(2)     --------->AHL20(2)  --------->AHL20(2) --------->ANAC55(2) -->ICU4 <---------AHL20(2)  --------->YAB1<---------AHL20(2)           --------->ANAC46        <<<<< >YAB1   --------->AHL20(2) <---------YAB1 --------->AHL20(2)          <-------TEIL  ------>ZmHOX2a(1)   ttgagaaacaaataaataatcactaattttatcatatatatatatatatatatgataaaattatagacatatatacataacttgttcctcataaacaatg  12500800                                    <---------ICU4                       --------------->AGL15                       <---------------AGL15                      <-----------------AG------>NtERF2                      ----------------->AGL2              --------->ANAC58      --------->YAB1              --------->AtLEC2     <---------ATHB12                      <---------ANAC58              --------->ANAC58     --------->ICU4                        <---------ANAC58             --------->WOX13(1)  --------->GLK1(1)                 <---------AHL20(2)          ------  <------ZmHOX2a(1)   <-----------------AGL3<---------DAG2       <---------AHL20(2)            ------ <<<<EIN3--------->GLK1(1)       <---------GLK1(1)         ----------->GT1                    <------   tataggaactgatatcaagcaaaaactcaatttggaaatcatggcaccttataccatcgtattgtatatttttttgggtatgaactatgtctattgatcg  12500900  Previous    Next  AGI:  At2g29080.1    Description:  FTSH3 (FtsH protease 3); ATP-dependent peptidase/ ATPase. similar to FTSH10 (FtsH protease 10), ATPase [Arabidopsis thaliana] (TAIR:AT1G07510.1); similar to hypothetical protein OsI_019542 [Oryza sativa (indica cultivar-group)] (GB:EAY98309.1); similar to AAA-metalloprotease FtsH [Pisum sativum] (GB:AAK77908.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21625.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR00359 Range:  from: 12496704    to: 12500362    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version