Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                 ----                                                                                               <-----        --------->ANAC58                                          <------MYB46(1)              ------        --------->ANAC58                                          <------MYB83                 <-----    ------->GAMYB                          --------->DOF5.7(2)   <---------AtMYB61             <-----   --------->MYB46(3)       --------->MYB52(1)                   --------->MYB59               ------ ------>YAB1     ------>ZmHOX2a(1)         <---------MYB52(1)  <---------ANAC46          --------->ATHB12 ------>TOE1(3)  --------->LBD16          --------->At5g28300<---------MYB46(3)         --------->ICU4 ------>TOE2(3)----------->RAV1(2)       ----------->GT1     --------->MYB55(2)         <---------YAB1 ------YAB1   ------>ZmHOX2a(1)       --------->ARR14(2)    <---------AtMYB61         ---------->DOF2 ------GT1   <---------ALFIN1         <---------ARR14(2) --------->ALFIN1         ------->TEIL<------   ccataaccacaagctcctcctgaaaacaaaaaacagagcaaaaccgttaatttgacaatgtggtggtttggtttagcatagatgaacataaagattggat  12440300      <-------TEIL  --------------->AtSPL8  --------------->AtSPL3  <---------TOE1(3)  <---------TOE2(3)  <---------------AtSPL8 --------DOF2 -->ZmHOX2a(2) ----ARR11(3)                 <-----------GT1 --->ARR14(2)          <---------TOE2(3) ----ARR14(2)         <-----------GT1              --------->ATHB12 ----AGP1            <-----------GT1            ---------->DOF2    <-------TEIL --->ARR11(3)    <---------ARR11(3)    <-------GAMYB           <---------TOE2(3) ---CCA1(2)      --------->ARR11(3)   <---------MYB46(3)    <----------DOF2--------->GLK1(2)   ctttaaggtacaaaatcaagattttaacattttcacaatgtggttaccaaaaaagattggaactttaggttgatgagaatgtggaagagaagagagagag  12440400                                                  <---------TGA1a                                                  --------->O2                                                  <---------bZIP60(1)                                                  --------->bZIP60(1)                                                  =========================MYC_MYB                                                  <---------ANAC58                                                  <---------ANAC46     --------->AtMYB61                                     <------NtERF2<---------ANAC55(1)  <---------ALFIN1                                    ------>NtERF2 ==========================MYC_MYB               <--                                   --------->DEAR3(1)                 --------->MYB46(3)          <--                                   <---------ALFIN1                 ------->GAMYB             <------                                  --------->MYB46(3)               <---------MYB111(2)        <------                                  <---------ABI4(2)                <---------MYB55(2)       ---------                            --------->At4g35610   --------->TGA1a  --------->MYB46(3)      <---------GLK1(2)                           <-----------HVH21      <---------ANAC58------>MYB46(1)       <---------TOE1(2)                        --------->ANAC58          <---------O2    -------->P           ------>ZmHOX2a(1)                        --------->ANAC58         <-----------------------TaNAC69(2)    --------->HSFB2a(2)                    <---------HSFC1(1)         --------->ALFIN1   ------>MYB83         --------->LBD16                    <---------HSFB2a(2)    ---------->DOF2       --------->ANAC46     --------->TOE1(2)                    --------->HSFB2a(2)    =================bZIP_DOF--------->AtMYB61 <---------LBD16                    --------->HSFC1(1) --------->LBD16 <---------At4g35610           ----------->RAV1(2)   ggagagagacatacccattgttccagaagcatcagagccaccgtagaaagtggcgtgagcagtttcccaaccaccaccattgtaaactcctgggattctt  12440500                                               <---------ICU4                                             <---------ALFIN1 -------ANAC58                          --------->ANAC58 -------ANAC58                          --------->ANAC58 ---ANAC58                              ------>MYB46(1)--------->ICU4 ---ANAC58                              ------>MYB83----------------->AGL1 >GLK1(2)    --------->ICU4  ----------->GT1 ----------->RAV1(1)                                  ---   gcttcagacaatgcaagaattgtagtaagaacagataaaaccaagcccaacattgccattatctgagagagagactgagaaaatagagagagattgggag  12440600                                               --------->REM1(2)                                               <---------ZAT14               <---------At4g35610            --------->ALFIN1            <------NtERF2                   <---------ANAC46                  --------->AHL20(2)         <------ZmHOX2a(1)      <---------ANAC58                          <-----------TBP      <------NtERF2   ----------->GT1      <-------MYC3                 *TSS  <---------AHL20(2)      <---------At4g35610       <---------ANAC58                  <---------At4g35610      --------->At4g35610 --------->ATHB12 ------->MYC3           ----------->GT1<------------CBF --- ------>CCA1(2)--------->At4g35610--------->ALFIN1                --------->At4g35610             <--   aaatgggcagaggaggcagaagaagagtttattggagtgtctccatgtgtgtagggaagggtatagagaggtgactatatataaattgggacttaagcat  12440700              --------------------->WRI1              <----------DOF2             <---------ANAC58             <---------ANAC58        <--------HAHB4  --------->AHL20(2)                 <---------ICU4      <---------STY1(1)  <---------AHL20(2)                 --------->YAB1      --------->STY1(1) <---------AHL20(2)             <----------DOF2      ----------------->AGL1  <---------ANAC58 ------>AHL20(2)            <----------DOF2 ---------->DOF2   <-----------HVH21  <---------YAB1 -------AHL20(2)    <---------YAB1  <---------YAB1 <-----------GT1           <---------ANAC58   ttatttatttctcttgctttgtattattctctttctttatcattacaaaagtttaacctctaggggtcatagttctctagcttatgaatagagattacta  12440800                                                                                   <---------ANAC46                                                                                   <------MYB83                                                                                   <---------ANAC58                                                                                   <------MYB46(1)                                                                                   <---------ANAC58                                                                                  --------->MYB46(2)                                                                                  --------->MYB111(1)                                --------->ATHB12                                  <---------AtMYB61                                <--------HAHB4                                    <---------MYB46(3)                                --------->ATHB51                       --------->ATHB51                                <---------ICU4                         <--------HAHB4                                --------->AHL20(2)                     <---------ICU4                                -------->ATHB1            <---------ANAC58 <---------AHL20(2)                                <---------AHL20(2)        <---------ANAC58--------->AHL20(2)                               --------->ICU4             <---------ANAC46<---------AHL20(2)                               <---------ATHB51   --------->DAG2      --------->ICU4          <------                            <---------YAB1       ---------->DOF2    --------->TOE2(3)<---------ANAC46                          <-----------GT1 ----------->GT1--------------->AtSPL3--------->ATHB12   aacacgatttgggtttttgacaaaagttttacaattatttgtatgtgtaaaaaaagtcatgcgtacaaatccataattaaatgtttggtgtatgcccttt  12440900                                                           <---------MYB46(3)                                                          --------->ALFIN1                                                          <---------AtMYB61                                                        --------->ALFIN1                                                      --------->O2                                  -                                                      <---------O2                       <---------ZAT14                                                      <---------ANAC58                   <---------SPL7                                                      <---------ANAC46                   --------->ZAT18                                                      <---------ANAC55(2)                --------->ZAT14                                                      <---------ANAC55(1)               <---------ZAT6                                                      --------->TGA1a                  <-------------                                                      <---------TGA1a                  <-------------                                                      <---------ANAC58      --------->YAB1         --                          <---------ICU4    <---------ANAC58               <---------ATHB12      ----                          --------->ATHB12  <---------ANAC46             --------->WOX13(1)<---------LBD16 ----DOF2                <---------YAB1     <---------ANAC58     --------->ZAT6       <--------------   ccctcaatgtgtctctaccaaaatatagttattgctaagaccacttgcgtttagtaacgtgtggttcacactgcccaatcatagttcatagtgtacggat  12441000     ----------->GT1                       --------->ANAC58 -------->YAB1                        <-----------GT1                 --------->AtMYB61 --AtSPL3                         <---------ARR11(3)                  <---------ALFIN1             -- --AtSPL8                 <---------YAB1   --------->ANAC58      --------->SPL7                    <- ------->ICU4          --------->GLK1(2)   --------->ANAC46<-------GAMYB      --------->MYB52(2)   -- ------>DOF2    --------->ZAT6    --------->ARR11(3)     --------->ZAT18   <----------DOF2        <-- ----SPL14   <-----------GT1  ---------->DOF2       ---------->DOF2  --------->MYB46(3)--------->YAB1   aaagatgatgttatatcaccactaaaatctgataaagatgttaccacgctccattgaagcgcgttgggacgaccactctttagttgctatcaaaattttt  12441100                                                                                        <---------HSFB2a(2)                                                                                        -------------                                                                                        <------------                                                                                 <------MYB83       <---------YAB1                                                            <------MYB46(1)   <----------DOF2                           <---------YAB1                  ------->TEIL   <-------- ---->NtERF2                            --------->YAB1                       --------->ARR14(2) --------ZAT18                         <---------YAB1              --------->ANAC55(2) <------------- ------->ZAT18<----------DOF2       --------->TOE1(2)       <---------AHL20(2)  --------->MYB59 -------RAP2.6(2)                 ------->TEIL      <---------ANAC46         <---------ARR14(2)     -   gcgccctttaaaattgctatatcgtctctggctatggacctatgataactattgatgtgtattgaatttaagtaatacgaatttggtattctagtaatgg  12441200  Previous    Next  AGI:  At2g28950.1    Description:  ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6). Identical to Expansin-A6 precursor (EXPA6) [Arabidopsis Thaliana] (GB:Q38865;GB:O81065;GB:Q8LDV8); similar to ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) [Arabidopsis thaliana] (TAIR:AT2G39700.1); similar to Expansin [Brassica napus] (GB:CAA04385.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117); conta Range:  from: 12438418    to: 12440672    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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