Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->HSFC1(2)                                             <---------HSFB2a(1)         <---------At4g35610                 <---------HSFC1(2)         --------->At4g35610                 --------->HSFB2a(1)     <-----------HVH21               --------->ETT(2)                              --------->ZAT14    <----------DOF2       ----------->GT1  <---------GLK1(2)                <-----------GT1      ---- ------DOF2       ----------->RAV1(1)<---------ETT(2)             <----------DOF2  <---------ZAT14   ttctctctttcagctacttgcaacaaaattgcaaaattgtcgacagaaacttctctcaaatttagttcctttctcatttatccactgctcttaatccaac  12431500                                                                    <----------DOF2                                                                   --------->TOE2(3)                                                                <-----------GT1           ===========           --------->ARR14(2)                             ----------->GT1                 ------>ZmHOX2a(2)   <---------ARR11(3)                                    --------->DAG2        <-----------GT1   --------->ARR11(3)                             <---------At4g35610         --------->ZAT14 ----->TOE2(3) ------>ZmHOX2a(1)       ------>ZmHOX2a(1)---------->DOF2      <----------DOF2  -------   ttcaatatctctctatcctcacaatatttgttctgtttctccttcaactttcaactgataaagtttaaacctttatgctctttactctctgatctcaaaa  12431600                                          --------->ZAT18                                          <---------ZAT14                                          --------->ZAT14                                    <----------DOF2                               <---------GLK1(1)                         <-----------RAV1(2)                               --------->GLK1(1)                      --------->ANAC58           ----                              <---------ARR14(2)                      --------->ANAC58          <----                              --------->ARR14(2)                <-----------RAV1(2)             ----- ======================HOX2a_HOX2a <---------ANAC58      <-----------HVH21             <----------DOF2 --->DOF2       ------>ZmHOX2a(1)  <---------ANAC58---------->DOF2  <--------P<-------TEIL    -------   gggttttgtttagttctcctcaaaaccatggggatttgcttaagtgctcagattaaagctgtgagtccaggtaagccaggtacttcaagcttttaaaaat  12431700        <---------ICU4       <---------ATHB12 <-----------GT1                <---------AHL20(2)                  --------->DAG2 ----->AHL20(2)  --------->ANAC58                                  ---------->DOF2        <---------YAB1 -----AHL20(2)   --------->ANAC58                             <------MYB83            --------->ARR11(3) ---->AHL20(2)   --------->AtLEC2                             <------MYB46(1)         <---------GLK1(2) -->YAB1--------->YAB1        <---------WOX13(1)              ----------->GT1  --------->ICU4   aattttccaaacattactcatgcaaaatgttgatttacttaagttttgaagttttcattttagttggtataaagtagggtcttaattagattttgtttgc  12431800                                                       --------->AHL20(2)                                                    <------ZmHOX2a(1)                                                    *TSS                                                    ----------->GT1                  <-----------GT1             <--------P            <---------AHL20(2)              --------->MYB55(2)       --------->AHL20(2)                   <---------MYB46(3)       <---------AHL20(1)        <------MYB46(1)<------MYB46(1)       <---------AHL20(2)        <------MYB83<-------GAMYB  <---------AHL20(1)            <---------AtMYB61  ----------->GT1  --------->AHL20(1)            --------->MYB59--------->MYB111(2)                                  <  <---------AHL20(2)          <---------MYB52(1)<------MYB83                 --------->MYB59    -----  --------->AHL20(2)       <---------TOE2(3)--------->MYB111(2)        ---------->DOF2          <---- <---------AHL20(2)  <---------------AGL15 <---------AtMYB61       --------->TOE2(3)            ----- --------->AHL20(2)------------>CBF     <---------AtMYB61      <---------MYB59      <---------TOE2(3)   taattttattttatttagtttttcaatatgaggttaggttttttggtggttggaggataaaatgacttaacttaaaagttaggcttaatgttttgacaaa  12431900                          --------->AHL20(2)                  <---------AHL20(2)                  --------->AHL20(1)            --------->YAB1<---------AHL20(2)           <---------YAB1<---------WOX13(1)                           <-----------GT1     <---------TOE2(3) --------->ATHB12                          <---------AHL20(2) -----------HVH21 <---------AHL20(1)          <----------DOF2----------->GT1 ---->ARR14(2)    --------->AHL20(2)        ---------->ID1   <------MYB83        --------->YAB1 -----ARR14(2) --------->YAB1           <----------DOF2      <------MYB46(1)  --------->REM1(1)    <- ---->GLK1(2) <---------YAB1       ---------->DOF2       <---------MYB46(3) ------>ZmHOX2a(1)      <-   tctgtcaaaggttttcataataaattgattaattatctaaagctttgtcttttttttggtgtttggtttaattcactccttcatcaaaatcaaaaacaaa  12432000                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                -----                                                                                              <------                                                                                              <------                                                                                              <------             ------>ZmHOX2a(2)                                  <---------TOE2(3)            <------MYB83            --------->GLK1(1)                                   <---------TOE1(3)            <-------  <----------DOF2                                       --------->ZAT14                      <------MYB46(1) --------AHL20(2)                                   --------->DAG2                          --------- ----------GT1                                     ---------->DOF2                          <--------   tttacttttgtctgatctctaaaaacaaaaaacatgaaaatgggatttgtcgaaaaagtgaagtctaacgtttttttgtatgcaaactatgtgtttggtt  12432100 ----GAMYB ---->MYB111(2)                          -------->HAHB4 -----MYB46(3)                           --------->ATHB12 ---->MYB55(2)                           <--------ATHB1 ---ANAC58                              --------->ICU4                      --------->YAB1         == ---ANAC58                              <---------ATHB12                   <---------ATHB12        <- -GAMYB                                 <---------YAB1       --------->ARR11(3)       --------->TOE1(2) --MYB46(3)                   ---------->CDC5                <---------ARR11(3)  --------->MYB46(3)== >MYB59 <-------TEIL       --------->At4g35610           ---------->DOF2 --------->WOX13(1)   ------- -AtMYB61                  <---------At4g35610       ----------->GT1  <-----------HVH21    <---------ARR11(3)   gttgtataggtgcaagtccgaagtatatgagctcagaggctaatgattcactgggaagtaaaagctcttctgtgtcaatcagaacaaacccaagaactga  12432200      ------>ZmHOX2a(2)      ===================HOX2a_HOX2a     <------ZmHOX2a(2)     ====================HOX2a_HOX2a    --------->AGP1    <---------ARR14(3)    <---------ARR14(2)    --------->ARR14(3)    --------->ARR11(3)    <---------ARR11(3)    --------->ARR14(2)   --------->GLK1(1)                         <---------At4g35610   <---------GLK1(1)                    --------->At4g35610                                  <-------  ----------->ARR10                 <---------DAG2                                        <---------REM1(1) ============HOX2a_HOX2a         <-----------GT1 ---------->DOF2                  <---------ZAT18 -----ZmHOX2a(1)      --------->TOE2(3) <---------At4g35610                  --------->ARR14(2) ===========HOX2a_HOX2a   ---------->DOF2    --------->At4g35610             <---------ARR14(2)  <--- ---->HVH21       ------>ZmHOX2a(1) <----------DOF2            <------ZmHOX2a(1) <---------ZAT6 -----   aggagagatcttgcaatctcctaatctcaaaagtttcacttttgctgagcttaaagcagcaactaggaattttagaccagatagtgttcttggtgaaggt  12432300                                                                    <---------MYB46(3)                                                                   <---------AtMYB61                                                                   --------->ALFIN1                                                                 --------->ALFIN1                                                                 <---------ANAC46                                                                <---------MYB52(1)                         <---------WOX13(1)                --------->ARR14(2)                      <------MYB46(1)                      <---------ARR14(2)                       < --AtMYB61            <------MYB83                      --------->LBD16         <<<<<<<<<WRKY18    <- ------MYB46(3)     <--------P                         <---------LBD16<---------YAB1               -- ---->ALFIN1     <---------TOE2(3)  <---------GLK1(2) <---------LBD16<-------GAMYB     --------->TOE2(3)   ggttttggttctgttttcaaaggttggattgatgaacagactcttactgcttctaaaccgggaaccggtgtggttattgctgtcaaaaaacttaaccaag  12432400  Previous    Next  AGI:  At2g28930.1    Description:  APK1B (Arabidopsis protein kinase 1B); kinase. Identical to Protein kinase APK1B, chloroplast precursor (APK1B) [Arabidopsis Thaliana] (GB:P46573;GB:Q9SLH5); similar to APK1A (Arabidopsis protein kinase 1A), kinase [Arabidopsis thaliana] (TAIR:AT1G07570.2); similar to APK1A (Arabidopsis protein kinase 1A), kinase [Arabidopsis thaliana] (TAIR:AT1G07570.1); similar to MLPK isoform 2 [Brassica rapa] (GB:ABP01775.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 12431852    to: 12433751    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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