Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ANAC55(2)            <-------TEIL        ----------->GT1      ---------->DOF2                                   <---------ANAC46              --------->ETT(2)      --------->ZAT14                                 <---------ANAC46     <---------ANAC58 ---------->RAV1(1)                                <-----------RAV1(1)     <---------ANAC58 -------->MYB52(1) <---------AHL20(2)      --------->ZAT6        --------->DAG2  <----------DOF2 ------->ANAC46    --------->AHL20(2)  <---------MYB52(2)       ---------->DOF2 --------->TOE2(3) ----->ANAC46<---------ANAC55(2)     <---------ARR11(3) <---------YAB1--------->MYB52(1)     --------   cacaacagtaaagttacataataaaactagacagaacaagaactaacacttatgtgttgtgtttgataaagttaagggcttacctttgtcgatggccttg  12422300                                     ------------------------>ANAC81                                --------->TOE2(3)        --------->HSFB2a(2)     <---------MYB59        <---------HSFB2a(2)     --------->TOE1(3)                                                   -      --------->At4g35610     ------>MYB46(1)                           <------ZmHOX2a(2)    --------      <---------At4g35610     ------>MYB83                            --------->At4g35610   ------>ZmHOX2a(2) ------------->WRI1           -------->P    ---------->DOF2   --------->YAB1     <-----------GT1   --   taagtgtcttctgcaagagatttagtgactccaacctaaaacccatcaaagaagaaaacaacaatgagaaacagatcacaaattaacaaaatgatccatc  12422400                                                                                              <------                                                                                           <---------GLK1(2)                                                                                          --------->ZAT2                                                                                      ----------->RAV1(1)                                                                                     --------->DREB2C(2)                                                                                     --------->DEAR4(1)                                                                                     --------->MYB46(3)                            ------>ZmHOX2a(2)                                        --------->DEAR3(1)                            =============HOX2a_HOX2a                                 ----------->HVH21                           <------ZmHOX2a(2)                                         ------->GAMYB                           ==============HOX2a_HOX2a                                 --------->At1g77200                          <---------ARR14(2)                                        <------NtERF2                          --------->ARR14(2)                                        --------->MYB46(3)                    --------->At4g35610                                      --------->At4g35610 <---                    <---------At4g35610                                      <---------At4g35610 <---                    <---------ZAT2             --------->At5g28300         <---------ZAT14<---------ZAT2    --------->CCA1(2)     --------->ARR11(3)  ------->GAMYB      --------->GLK1(1)  --------->DEAR3(2) -------->DAG2      --------->ZAT2<------ZmHOX2a(1)        ---------->DOF2 --------->ZAT18<---------At4g35610 ->WOX13(1)      <---------At5g28300       --------->MYB52(1)    <---------GLK1(1) ------>NtERF2 <--- -------->DOF2  <-----------GT1 <---------TOE2(3)     ----------->GT1  <---------TOE1(2)  --------->At4g35610   aaaaagagatgagtttttttacagctccgatcttgaggaaggcatcaacggtgagattgagaaaagggtttcccatgtccactgccaccgacagcttcgg  12422500                                                                                                    -                                                                                                    <                                                                                        ------>ZmHOX2a(2)           --------->LBD16                                                              <---------ICU4           <---------ANAC46                                                           <---------ARR11(3)          <---------LBD16                                                             --------->ARR11(3)      ------->GAMYB                                                           ---------->ID1        -     --------->ZAT6    <----------DOF2                                       <-----------GT1        -   --------->MYB52(1) <---------ANAC58                                  <---------CCA1(1)    <------- ---DEAR3(1)--------->LBD16                     <------------------------ANAC81   <----------DOF2   < ------ANAC46         <---------ANAC58       <----------DOF2            <---------RVE1(1)    <------- ------ANAC58    <---------KAN4(2)      <<<<<<<<<TBF1                  --------->ARR11(3)    <------- ------ANAC58    --------->GLK1(2)<----------DOF2    ------>ZmHOX2a(1) <---------ARR11(3)<----------DOF2   cgtgctaacagtcccggagaatgtgcttgaaggcatcttttcttcttctttcttcctctgtttttggttttgggatatttttctctttgatctttgcttg  12422600                                                   <---------CCA1(1)                                                   <---------RVE1(1)                               -- -------->ANAC55(2)                               <---------ARR14(2)                               -- ---------HSFB2a(2)                        <---------At5g28300                                   <--- ---------->GT1                --------->DAG2     <---------ARR11(3)                            ----- -------->HSFB2a(2)           ---------->DOF2     --------->ARR14(2)      --------->ALFIN1      ----- --ANAC46                  --------->CCA1(2)    <---------MYB46(3)      ------->GAMYB         ------- ---------ANAC55(2) <---------ANAC58      --------->MYB52(1)        <---------WRKY12         <------ZmHOX2a(1) --ANAC58           <---------ANAC58      <-----------GT1           <---------WRKY38(1)    --------->ANAC58 --ANAC58           <---------ANAC46  <----------DOF2  *TSS    <---------TOE2(3)           --------->ANAC58   ttctgtaacaagttcacctatttcttgggatataaaggggcttttaacggtggatattttaaactatggttcaacggtggagaagagattaacaaggacc  12422700            <------------CBF         --------->ANAC55(2)       --------->CCA1(2)      --------->ARR14(2)                                                                 --------->O2      <---------ARR14(2)                 <------------CBF                      ------->GAMYB   ------      --------->ARR11(3)             <---------TGA2(1)                         ======================      <---------ARR11(3)             --------->TGA2(1)                        --------->MYB46(3)  <--    ----------->ARR10                --------->ETT(2)                        ------>MYB46(1) -------- ------->ANAC46                      <---------ETT(2)           --------->ANAC58         <---------ANAC55(2) --------->HVH21                     <---------bZIP60(1)        --------->AtLEC2         <---------O2 ------ALFIN1              ----------->GT1      ------>ZmHOX2a(1)            ------>MYB83<---------ANAC46 ---->MYB46(3)       <---------ATHB12--------->bZIP60(1)        --------->ANAC58--------->ANAC46  === ---->TOE1(2)    ------------>CBF   ----------->STF1<---------TOE1(2)        -------->P  --------->ANAC55(2) -->PCF2 <---------ANAC55(2)      ----------->TGA1 ------>ZmHOX2a(1)         --------->ANAC46<-------   cacgacgagatatgtattgagcaatgagccagttaaatgacgacattgtcctcctaggctagagccatgccaaaaatccaacccacaagtctcgtgatct  12422800                       --------->At4g35610                  <---------O2                  --------->TGA1a                  <---------ANAC46                  --------->O2               --------->MYB52(1)                  <---------TGA1a           <---------ATHB51                 <------NtERF2<---------ANAC58      ======================MYC_MYB   ----------->GT1      ------->GAMYB<-----------HVH21  <---------ANAC46     --------->ANAC46  <---------At4g35610  <---------AHL20(2) >ZmHOX2a(2)    ------>NtERF2 <---------ANAC58 ===========================MYC_MYB  <------NtERF2 --------DOF2   <---------RAP2.6(3) <---------RAP2.6(3)                            --------->ARR11(3) ->ARR11(3)    --------->DEAR3(1)  --------->DEAR3(1)       ---------->DOF2        <---------ARR11(3) ===========================bZIP_DOF------>NtERF2      ----------->GT1     --------->ZAT6    <------- --ARR11(3)   --------->DEAR3(2)  --------->DEAR3(2)   <---------ZAT6    <-----------GT1     --------   ctttacaacgacacttgccgacgtgagctctaacttgccgacgtaaataatggaatagagtaaaaagacacaaattaacaccaagtatctcaatagtgtt  12422900                         ------>MYB46(1)     --------->ANAC58    ------>MYB83     --------->ANAC58  <---------MYB59 --------->ZAT6        --------->AtMYB61           ---------->DOF2 --ZAT6         --------->MYB52(1)        ----------->GT1                              ---------->DOF2 --->GT1      <---------MYB52(2)        ----------->GT1                         ----------->RAV1(1)   ataacacaagcttgaaacaaacagaccaaaccagagtatggagagtgaaaatacaaagacatgtttcaacacaaatcaaatccaacatacaaagacatgt  12423000                                                                                                 ----                                                                                               <-----                                                                                               <-----                                                                                          <---------ANAC58                                                                                          <---------ANAC58    --------------->AtSPL8                                                                <---------bZIP60(2)    <---------------AtSPL8                                                               ----------->STF1  --------->ATHB51                                                                      <---------TGA2(2)  <---------ICU4                                                             <----------DOF2 <-------  --------->ATHB12                                                           ----------------------->TaNAC69(2) <---------YAB1                                                   ------>ZmHOX2a(1)    ----------->TGA1 --------->ICU4   --------->YAB1    ----------->GT1          <---------GLK1(1)    ------>ZmHOX2a(1)   ttcattattgtacataacattgataagagagaaatggagagtgaaaatggctcatatagatcgatttcctactctcgctctttcctgtgatgacgtttcc  12423100                                                                                    --------->TOE1(2)                                        ----------->HVH21                          <---------At4g35610                                      <---------ANAC46                             <---------ZAT2                                      >>>>>>>>CAMTA3                               --------->ZAT2                                      ----------->GT1                              --------->At4g35610                                      <---------ANAC55(2)                          --------->HSFC1(2)                              <-------PIF5                                         <---------HSFC1(2)                              ------->PIF5                                   <---------At4g35610                             --------->ANAC58                       <---------At4g35610    <--------- -->ZmHOX2a(1)               --------->ANAC58          ----------->HVH21     --------->At4g35610 ----ANAC58                <---------ALFIN1          ----------->RAV1(2)   <-----------RAV1(2) ----ANAC58             --------->ARR14(2)      <---------ICU4    <---------ANAC58 <---------HSFB2a(1) --ARR14(2)             <---------ARR14(2)   --------->YAB1       <---------ANAC58--------->GLK1(2)--   tgctcttcttctcagaccgcttagaagaaccacgtccaacgcgtgaaacatcatcgcctgaaacatttgcttctgagtcagaagaagctgcgactttgtt  12423200  Previous    Next  AGI:  At2g28900.1    Description:  OEP16 (OUTER ENVELOPE PROTEIN 16); P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to ATOEP16-2/ATOEP16-S, P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G16160.1); similar to ATOEP16-2/ATOEP16-S, P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G16160.2); similar to core protein [Pisum sativum] (GB:CAA97910.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) Range:  from: 12421191    to: 12422655    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g28910.1    Description:  CXIP4 (CAX INTERACTING PROTEIN 4); nucleic acid binding / zinc ion binding. Identical to CAX-interacting protein 4 (CXIP4) [Arabidopsis Thaliana] (GB:Q84Y18;GB:Q8L8W3;GB:Q9ZV23); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ71503.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) Range:  from: 12422857    to: 12424462    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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