Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ANAC58           <-------GAMYB           <---------ANAC58          <---------MYB46(3)         <---------AtMYB61      <----------DOF2                   <-----------GT1 --------DOF2                 --------->ARR11(3)                                          --------->YAB1 --->ARR11(3)             <---------AHL20(2)           --------->PCF2              ----------->GT1 ----ARR11(3) <-----------HVH21        --------->AHL20(2)                      --------->ARR11(3)   ctttgactcttttggttgtcacttagaattaatgtcttcaattatctattcatctaggtccctcttatttcttcatacttagaccttgtaaatcatatgt  12370300                                         <---------AHL20(2)                                       <---------CCA1(1)                                      --------->ARR11(3)                             --------->ANAC46                                <---------YAB1----------->HVH21                      --------->ANAC58                                <---------AHL20(2)                                   --------->ANAC58                             --------->AHL20(1)                           --------->HSFC1(2)---------                             --------->AHL20(2)                           <---------HSFC1(2)---------                             <---------AHL20(1)                       ----------->ARR10     <--------       ----------->GT1    --------->YAB1 <---------YAB1    --------->TOE1(3)       <---------ALFIN1    <-----------RAV1(1)--------->YAB1 <---------ARR11(3)   --------->TOE2(3)      --------->ZAT14----   atacatatgtggtattttctaacaaaaatcatatattatagatattattcgacagagggaaccttataggcgaagaaacgtccctccactcaaaccctaa  12370400                      --------->AHL20(2)                      <---------YAB1                      <---------AHL20(2)                     --------->TOE2(3)                   --------->AHL20(1)                  --------->AHL20(2)                  --------->YAB1                                             ----------->GT1      --------->YAB1 --------->YAB1                               --------->AHL20(2) >TOE2(3)      --------->YAB1               <---------ATHB51     --------->AHL20(1) >TOE1(3)    --------->AHL20(1)             <---------ATHB12     <---------AHL20(1)    --------->YAB1 -------AGL15--------->AHL20(2)      <---------ARR14(2)         --------->AHL20(2) ---------->DOF2 ------>DOF2--------->YAB1  <---------ANAC55(2)           ----------->GT1  ---------->DOF2       ----   aaagagaatcacaaaaataataatattaatacataagcatatacaaataatgcatgagagtggaaaatatatataagaaaagaaataaagcataagaaca  12370500                                         <---------At4g35610                                    <----------DOF2              --------->ANAC58    <---------YAB1            ---------->DOF2      <---------ARR11(3)   --------->YAB1                   <----------DOF2   <---------TOE2(2)          <---------DAG2         <---------YAB1         <---------CCA1(2) ------->HVH21--------->ANAC58<----------DOF2 ------>ZmHOX2a(1)          --------->TOE2(3)   <-------   tgacccatgtttagaaaagcattatgttctcactttatctttgtgctccttcactatcatcatcttctctctaaacctctatcttctctctttctctttt  12370600                                                                                                    <                                                                                                   <-                           <----------DOF2                                                        <--                ------>ZmHOX2a(1)                     <-----------TBP<---------ALFIN1             ---            ------>ZmHOX2a(2)                     <---------ANAC58   --------->ANAC46             ---           <---------GLK1(1)                      <---------ANAC58  --------->MYB46(3)            <--          <---------ARR11(3)         <---------MYB46(3)     <---------YAB1         <----------DOF2--- ---DOF2  --------->ARR14(2)  <-----------GT1  <----------DOF2<---------GLK1(2) ---------->ID1-------   ggttctgtgctcgatctcctcacatctctctttaacctttggttcccttctttcgtttttatatgattctcccaccatttttgttcttttgagttttaaa  12370700                                                                                                  <--                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               <-----       *TSS                                                                                    ------ --------->WOX13(1)                                                                         --------- -------TEIL   ---------->DOF2                                                         --------->MYB46(3) -----ZmHOX2a(2)                                                                      <------ZmHOX2a(2) -------ARR14(2)                      ---------->DOF2                                --------->ARR11(3) ------>ARR11(3)          ------------------------>ANAC81                            <---------ARR11(3) ------>AGP1 <---------YAB1  ---------->DOF2                                         --------->AGP1 -------ARR11(3)   ---------->DOF2  --------->CCA1(2)                                --------->ARR14(2) ------>ARR14(2)<---------TOE2(3)----------->GT1                                     <---------ARR14(2) --->DOF2<----------DOF2 <----------ID1        >>>>>>>>>TBF1                  <----------DOF2 <------   gatccatcaaactttattaaagaaagaagaacaaagagataaaagggaagaagaacaatggttttctcatccgtctcaagctttttagatccaccaatta  12370800         <---------ARR11(3)        <---------GLK1(2)     <-----------RAV1(2)   ----------->RAV1(1)          ------>MYB46(1) -------WOX13(1)                ------>MYB83 ---->ATHB12                  <---------MYB59 ----AHL20(2)                 --------->TOE2(3) --->AHL20(2)     ------>ZmHOX2a(2)                                                                <- ----AHL20(1)   --------->ARR11(3)                                    <---------At5g28300    <------- --->AHL20(1)   <---------ARR11(3)       <----------DOF2          <---------ICU4           --------->ATHB12 >WOX13(1)  <----------DOF2  --------->ANAC55(2)      <----------DOF2<-----------GT1     <---------WOX13(1) ---ATHB12<-------TEIL     <-----------GT1        <----------DOF2--------->ICU4        --------->ATHB12   attggccacaggttctttgatcttccattatacctaattctctctttctctactttctttttgtgtgatttttaccgctcttaaattcttcattgattgt  12370900                    <---------YAB1                 --------->ICU4               <---------AHL20(2)               --------->AHL20(2)                ------>ZmHOX2a(1)               <---------AHL20(1)         --------->ARR11(3)               <--------ATHB1             --------->AHL20(1)               <---------ICU4             <---------ARR11(3)               --------->YAB1            --------->CCA1(2)          <---------AHL20(2)            --------->ARR11(3)          --------->AHL20(2)            <---------ARR11(3)                 --------->ARR11(3)  ------         --------->YAB1 <-------TEIL---------->DOF2                        <---------ARR11(3)  <----- --------YAB1 --------->ICU4      <---------HSFB2a(2)                <----------DOF2    ---------->DOF2 --WOX13(1) --------->YAB1        --------->HSFB2a(2)            --------->YAB1  <----------DOF2   tttgattcttatattaataattttgattcattttttctaaaagatatattcctattctcatcttcattcatctttaagctcttcttttttcaaagttcca  12371000                     <---------DAG2                     <----------DOF2      --------->YAB1<---------ANAC58                                                         <-------     <-------TEIL   <---------ANAC58                                                       --------->ATHB12 --->HSFB2a(2)  <---------ANAC58                          <---------ZAT14----------->GT1  <---------YAB1 ----HSFB2a(2)  <---------ANAC58                  --------->AHL20(2)   ---------->DOF2  --------->YAB1   aaacatattcatggtatttcttgctttataatctcacctatatatagaccatttacatactatacggtttacataaagaaaaacaaacaattttgattga  12371100                                                            <----------DOF2                                                            <---------DAG2                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                              <---------ANAC58                 <---------HSFC1(2)           <---------ANAC58                 --------->HSFB2a(1)          <---------ANAC46                                      <                 <---------HSFB2a(1) <---------ANAC46      <------------------------ANAC81        <--    --------->ATHB12                 <---------ANAC58--------->AHL20(2)                     ---------   <---------ATHB12               <----------DOF2----------->GT1                            --------- --WOX13(1)      --------->HSFC1(2)  <---------ANAC58<---------AHL20(2)                     <--------   aaccaaagattgaattagaagtttctacatgttgttctttcttgtattgtgtgattaaattcctttttgtttgtttgtttgtttgcagtctgcgaatcca  12371200  Previous    Next  AGI:  At2g28810.1    Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF2.2 (DOF2.2) [Arabidopsis Thaliana] (GB:Q9ZV33); similar to OBP2 (OBF BINDING PROTEIN 2), DNA binding [Arabidopsis thaliana] (TAIR:AT1G07640.3); similar to hypothetical protein [Vitis vinifera] (GB:CAN60303.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 12370707    to: 12372454    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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