Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <-----------RAV1(1)                          ---------->DOF2                     ------->TEIL                               --------->TOE1(3)          <---------LBD16                                       --------->TOE2(3) -------MYB46(3)  --------->ICU4                           ---------->DOF2                        <-- ---------RAV1(1) <---------YAB1                          --------->YAB1           ------>ZmHOX2a(2) --ZAT14 <---------ALFIN1      --------->ETT(1)          <---------YAB1          <---------AGP1   <--   ttgttgcatcaccacgggtaatgaatgttgttgtcggaaaaaaaaacaagttttcaactatcaaagccttaaaggtgagattggatctatagagtttcaa  12345500                                             <---------ZAT6       <---------ICU4              <----------DOF2                                                ---       --------->YAB1          --------->ZAT14                  --------->ATHB12             -------- -------DAG2                   <---------ZAT14                 <---------YAB1               --------- --------DOF2           --------->YAB1       ----------->GT1 <----------DOF2               ----------   ctttttcacttatgacattgacttaagcataactacactttaaactagagtaaatactaaaaactttcattgcatttagaactcaattgaacaaaaagtt  12345600                                                                             <---------ANAC58                                                                          <---------RAP2.6(2)                                                                        <---------MYB46(3)                                                                       <---------AtMYB61                                                                       --------->ALFIN1                                                                       <---------DEAR3(1)                                                                <------NtERF2<---------ANAC46                                                              --------->ANAC58          <------NtERF2                                 ----------->GT1              --------->ANAC58<----------DOF2                                --------->TOE1(3)            --------->RAP2.6(3)        --------->ATERF1(1)     <---------ARR14(2)         --------->TOE2(3)            --------->ATERF1(1)      <---------DEAR3(1) ------->DOF2                  ----------->RAV1(2)          <---------ATERF1(1)   ---------->ID1 --->GT1                      -------->P                   <---------ARR14(2)<---------ANAC58   <---- >DAG2                     <---------MYB52(2)             <------ZmHOX2a(1) <------NtERF2 <---------SPL7 >DOF2              --------->MYB52(1)             <---------ANAC46 <---------AtMYB61<------NtERF2   taaagagtattttgacttcaaaaaacagaactaacctgaaaaaacttggaattacgcagaggagacggcataggtggtggctttgtcgtcgtcgtcccgt  12345700                                                               --------->YAB1                      <-           ------>NtERF2              --------->AHL20(2)       <---------ICU4                      --          --------->ANAC58            <---------AHL20(2)      --------->ICU4                       --          --------->ANAC46           --------->AHL20(1)     --------->YAB1                         <-          --------->ANAC58           <---------AHL20(2)    <-------TEIL        ----------------->AGL2 -----MYB52(1)     <-----------GT1   --------->AHL20(2)  <---------GLK1(2)    >>>>>>>>>MYB2 ---------   tagaagaattagacgccatttctacaattttgaatcaaatttaataaactctaatcacagattcatcatgagatttagaaaaccaaaaacagaataatac  12345800   ------->TEIL                                  <---------ARR11(3) <-------TEIL                                    --------->ARR11(3) ------MYC2                               ----------->RAV1(2) ----->MYC2       --------->YAB1         -------->P------>ZmHOX2a(2)                   <---------ARR11(3) ----->MYC3 --------->ANAC46        --------->WOX13(1)                             <---------At4g35610 ------MYC3<-------TEIL--------->ICU4 <---------ATHB12                  --------->YAB1 --------->ARR11(3) >YAB1--------->AHL20(2)--------->ATHB12 ------->TEIL --------->ANAC46 --------->AHL20(2)------>ZmHOX2a(2)   acatgcatttacatacacaatcacactgattagagtatcaatcaacctgatgatctaagaaacttgatgaaaaataaaaattgtcttctgatcttgatga  12345900                                                                                                -----                                                                                                -----                                         <---------AHL20(2)                                     <----                                 ----------->GT1                           --------->ANAC46     -----                                ------->TEIL      --------->YAB1         ----------->RAV1(1)    -----                               *TSS      --------->AHL20(2)       <---------ARR14(2)          -------                             --------->ANAC58 <---------AHL20(2)  --------->ARR11(3)       --------->ANAC58                             --------->ANAC58 --------->AHL20(2)  --------->ARR14(2)       --------->ANAC58                             --------->ANAC46--------->AHL20(2)   <---------ARR11(3)       --------->ANAC46        <-------TEIL     <---------AHL20(2)  <---------AHL20(2) <---------YAB1          XXXXXXXXXXXXX   cattaagagattcactggaatcaatatttatacgcatgtaaatttaaataaatcatatgaaacatgaagatagtcccacaaaatttgttaactaagccac  12346000                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                            ------>MYB46(1)                                                                            ------>MYB83                                                                          <---------MYB55(2)                                                                          --------->AtMYB61                                                                          <---------MYB111(2)                                                                          <---------MYB52(2)                                                                          <---------MYB46(2)                                                                          <---------MYB111(1)                                                                          --------->MYB46(3)        -                                                                         --------->ANAC58           -                                                                         --------->ANAC46           - ---->REM1(1)           <---------HSFB2a(2)                     --------->ANAC58                   -- ---->ANAC58            --------->HSFB2a(2)                     --------->ANAC58                  <-- -----ALFIN1          ------>MYB83                              --------->ANAC46                  <-- ---->ANAC46          -------->P                     --------->DAG2      --------->ANAC58         --- ---->ANAC58          ------>MYB46(1)               ---------->DOF2     ------->TEIL        <------MYB83 ---->RAV1(1)--------->AHL20(2)     ------->TEIL --------->ANAC58     --------->ZAT18       <------MYB46(1) XXXXXXX>MIR171A      --------->MYB52(1)         --------->ANAC58  ---------->DOF2  --------->YAB1---   accaaaaaaaaaaaaaaaaatccctaccagaaaaaatgaagcttcaaatgaacgaaaagtgagactacgaaatgcaccaaacccaattttaagttggtca  12346100           <---------YAB1       <---------ANAC46   <-----------HVH21  --------->ANAC46  --------->O2  <---------O2 -------->MYB52(1) ----->MYB83                                                         XXXXXXXXXXXXXXXXXXX>MIR157D ----->MYB46(1)                                                --------->CCA1(2) ------->MYB55(1)                                              <---------At4g35610 -------MYB55(2)                                               --------->At4g35610       --------->CCA1(2) -------MYB46(2)           ---------->DOF2              ---------->DOF2             ---------->DOF2 ------>AtMYB61           <---------ATHB12            --------->ANAC58          ---------->DOF2 ------>MYB46(3)---------->DOF2                       --------->ANAC58      ---------->DOF2         -   ccaaacgtcgcttatgaataaagtttcaataaagaaaatgagaacgtttttatatcaagaaagagagatgacaaaaaataaagaaagaaagataagagaa  12346200                                                                                            <------ZmHOX2a(1)                                                                                            =========                                                                                            =========                                                                              <---------AHL20(2)                                                                              <---------ATHB51                                                                           <---------AHL20(1)                                                                           --------->AHL20(1)                                                         <------ZmHOX2a(1) <---------AHL20(2)                                                 <---------YAB1            --------->AHL20(2)   <----                                 --------->ETT(2)<---------TOE2(3)     --------->ICU4     <---------TOE2(3)                                <---------HSFB2a(2)    <---------TOE2(3)--------->YAB1    <---------TOE1(3) --------->DOF2     <----------DOF2       <---------TOE2(3)        ----------->GT1    <----------DOF2   aacaaagactaagagagtttgactttagactattctcgacatttaagaattaagactgaggaaggaagatggaataataaattatgggttttaaggattt  12346300                  <---------GLK1(1)                  <XXXXXXXXXXXXXXXXXXXXMIR171A                  --------->CCA1(2)                 --------->ARR14(2)       <---------AHL20(2)    ------>ZmHOX2a(2)   <------ZmHOX2a(2)   --------->LBD16                         ---------->DOF2  --------->ARR11(3)  --------->ANAC46                     <----------ID1  --------->AGP1 <---------GLK1(2)                       ---------->DOF2                            -  <---------AGP1 <---------ARR14(2)                    <---------AHL20(2)                   <--------  <---------ARR11(3)  <---------ANAC58                 --------->AHL20(2)                  <---------LBD16 =========HOX2a_HOX2a<---------LBD16                --------->YAB1                  --------->ANAC55(2) ==========HOX2a_HOX2a<---------ANAC58            <---------YAB1    ---------->DOF2 <---------ANAC55(2) -----AHL20(2)--------->HSFB2a(2)   --------->TOE2(3)  --------->YAB1             <-----------GT1   -   tatagatcttaaatttcgagatttgcgcgactcgattaacttaaacttgagtattaataaaaagaaaaagaaaagcttagagtattacatattgacggga  12346400  Previous    Next  AGI:  At2g28760.1    Description:  UXS6; catalytic. similar to UXS5 (UDP-Xyl synthase 5), catalytic [Arabidopsis thaliana] (TAIR:AT3G46440.2); similar to UXS5 (UDP-Xyl synthase 5), catalytic [Arabidopsis thaliana] (TAIR:AT3G46440.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80550.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 12343265    to: 12345931    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version