Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->YAB1             <----------DOF2                           --------->ICU4             <---------ANAC58                     <---------ETT(1)                 <---------ANAC58                    --------->DEAR3(2)              <------MYB83                   <---------At5g28300              <------MYB46(1)          --------->ANAC58                  <-----------GT1                 <--------P                 --------->ANAC58     ---               <---------MYB46(3)              <---------TOE2(3)           --------->ZAT6     <------ ->ARR11(3)    --------->MYB52(2)              <---------TOE1(3)    ------->TEIL       <---------At4g35610 ->GLK1(2)  ------------>MYB.PH3(2)      <---------GLK1(2)       <---------YAB1       <---------TOE1(3)   agtctatgttcgaaagtttgttaccgacaatgagtatgcaatagaatttgaggttggcttttgtattatgaatcttcacactcatcttaagcttatatga  12333700                                                                                        <----------DOF2                                                                       --------->LBD16  ------>ZmHOX2a(1)                                                                      --------->HSFB2a(2)                                                                     <---------LBD16--------->GLK1(2)                                  <---------ARR14(2)        <---------MYB52(1)      --------->ARR14(2)                                  --------->ARR14(2)       <-------GAMYB            <---------ARR11(1) --->ZmHOX2a(2)        <----------DOF2                    ----------->GT1           <---------ARR14(2) ---YAB1--------->ANAC55(2)  <-----------GT1             --------->MYB59 ------->TEIL  --------->TOE2(3)   tcggttctatatgtaataaacttatcttttgtttcggttccagtttcaattctttcaattcggttattttgtccggacctagtccgaatcctttaatctc  12333800                                        ------>MYB83                                      --------->DEAR3(1)                                     <---------MYB52(2)                                     --------->MYB46(3)                                  --------->TGA2(2)                                 <-----------TGA1                                --------->O2                                --------->ANAC46                                --------->ANAC55(1)                                --------->ANAC58                                --------->ANAC58                                --------->TGA1a                                <---------O2                                <---------TGA1a                                --------->bZIP60(2)                               <-----------STF1                              <---------ALFIN1                             ------>ZmHOX2a(2)                       <---------ANAC58 ------>MYB46(1)                              ----------->RAV1(1)              <-----------RAV1(2)<-----------HVH21                                --------->HSFB2a(2)     --------->AHL20(2)<---------ANAC58--------->MYB52(1)                --------->At4g35610     <---------AHL20(2)--------->ANAC55(2)                          --------->WOX13(1)  --------->TOE2(3) <---------AHL20(2)    <---------ANAC55(2)                 <---------ALFIN1 ------>NtERF2  ----------   ggtttaatttataagcccaggtctaacgtgatccacgtcaccaacgatactgaacataactccacattagcaatccgatgccttctccaacataaaagaa  12333900                                                                                      <---------ANAC58                                                                                  --------->WOX13(1)                                                                                ------------>CBF                                                                             --------->TGA2(2)                                                                            <-----------TGA1                                                                           <---------bZIP60(1)                                                                           <---------ANAC55(2)                                                                           --------->bZIP60(2)                                                                           --------->ANAC58                                                                           --------->ANAC46                                                                           --------->ANAC55(2)                                     <---------CCA1(1)                     <---------O2                                     <---------RVE1(1)                     --------->TGA1a                                    --------->ARR11(3)                     --------->O2                   <-----------HVH21<---------AHL20(1)                     --------->bZIP60(1)                  --------->WOX13(1)<---------ARR11(3)                     --------->ANAC58           --------->YAB1         <---------YAB1 ------>ZmHOX2a(1)         --------->ANAC55(1)          <---------YAB1          <---------TOE2(3)       --------->MYB46(3)<-----------HVH21      --------->ANAC55(2) --------->LBD16       --------->TOE2(3)         <-----------STF1      <---------ANAC58   <---------ANAC46    <---------ARR14(2)          <---------ALFIN1     <------ >DOF2<---------ANAC58 --------->At4g35610   --------->ARR14(2)       <-----------GT1 <---------ANAC58   aaacacttacttatcatcatctatcagccgtagattaagatatttagtatcctcaatctaacaaacacaaaatcaccacgtcatcaatccttgtcaaatt  12334000                                        <---------At5g28300             --------->YAB1                                       <-----------GT1                 <---------ATHB12                                 --------->ARR11(3)                  --------->WOX13(1)                                 <---------AHL20(1)                <---------YAB1                                 <---------ARR11(3)               --------->TOE2(3)                                --------->CCA1(1)                --------->YAB1                     -         --------->YAB1         --------->RVE1(1)                <---------ICU4                    --        <---------ATHB12    ------>ZmHOX2a(1)        XXXXXXXXXXXXXXXXXXXX>MIR414                   <-      --------->WOX13(1)   --------->TOE2(3)   --------->REM1(1)<---------YAB1                 <-----    ------------>CBF     ------>ZmHOX2a(1)   <----------DOF2  <---------ICU4         --------->ARR14(2) ---GLK1(2)      <---------MYB52(1)  <-----------HVH21 *TSS   --------->YAB1         <---------ARR14(2)   ctctcatccaatcaaatccattacttcctccttaatatctttcaccgcttcatcatcttcttcatcatcatcaatcacaaaaatccaaatcccaaaactt  12334100                                           --------->ZAT2                                 ---------->DOF2          --------->At4g35610                              --------->RAP2.6(2)         <---------At4g35610                             <---------LBD16              <------NtERF2     --------->At4g35610                         ---------->DOF2   <---------ZAT2 --------->LBD16--------->At4g35610                      <------NtERF2--------->ANAC58     --------->ZAT18  --------->ZAT2             <---------AHL20(2) <------NtERF2           <---------LBD16  <---------At4g35610 --------->LBD16      --------->ANAC58     <---------At4g35610           <---------ZAT2           --- -------->LBD16       --------->ANAC58     --------->At4g35610          ----------->RAV1(1)      ---- ------->HSFB2a(2)   ----------->RAV1(1)  ----------->RAV1(1)   ---------->DOF2      ---------->DOF2 --------HSFB2a(2)   ------>NtERF2 --------->ANAC58 --------->DAG2     <-----------RAV1(2)   -------- -----DOF2   --------->AHL20(2)--------->LBD16     ---------->DOF2 --------->At4g35610     --------->At4g35610   tcccgagaaaactaaaaaaatggcaccaaaagccggaaagaaaccagcagagaaaaagcccgcagagaaagctccagcagaagaagagaaagtagccgaa  12334200                                                       <---------At4g35610                                                       --------->At4g35610      --------->At4g35610                              <---------LBD16      <---------At4g35610               <---------------AGL15     <---------HSFB2a(2)      --------->ZAT2                   ----------------->AGL2     --------->HSFB2a(2)      <---------ZAT2                   ----------------->AG     ------------------------>ANAC81     ----------->RAV1(1)    <------NtERF2             --------->MYB52(1)    <-----------RAV1(2)    ----------->GT1           <---------WRKY38(1)  ----------->RAV1(1)      --------->LBD16---------->DOF2--------->LBD16                   ---------- ------>DAG2              --------->RAP2.6(2)       ----------->HVH21      >>>>>>>>>TBF1--------->ANAC58 ------>DOF2             <---------LBD16--------------->AGL15<------ZmHOX2a(1) --------->CCA1(2) ->RAP2.6(2)         ---------->DOF2  -------->P   <-----------HVH21    >>>>>>>>>TBF1   --------->ANAC58   aaagcaccagcagagaagaaaccaaaagccggaaaaaaactaccaaaagaagcagtcaccggaggagtcgagaagaagaagaaacgagtcaagaaaagca  12334300                 <---------ARR11(3)                --------->REM1(1)             ------>ZmHOX2a(2)            <------ZmHOX2a(2)            --------->CCA1(2)           <-----------ARR10                                     ---------->DOF2           --------->ARR14(2)                                 --------->ANAC58           <---------ARR14(3)                   <---------ARR11(3)           <---------ARR11(3)                   --------->ARR14(2)           <---------ARR14(2)                   <---------ARR14(2)           --------->ARR14(3)                   --------->ARR11(3)    --------->CCA1(2)           ---           --------->ARR11(3)           <-------TEIL   <---------GLK1(2)         <---------YAB1  <--- >DOF2     --------->AGP1  --------->ALFIN1   --------->LBD16 --------->ANAC58--------->ICU4 <-------   cagagacatacaagatctacatcttcaaggtgttgaaacaagttcatccagatattggaatctcaagtaaagctatggggattatgaacagttttatcaa  12334400                                                                                       <---------MYB46(3)       <---------HSFC1(1)                        --------->YAB1      --------->HSFB2a(2)       <---------HSFB2a(2)               ----------->GT1  <---------------------WRI1 --------->At4g35610 <---------ARR11(3)                      <------MYB46(1)  ------>MYB83               <---------At4g35610 --------->ARR11(3)      --------->HSFC1(2)   --------->YAB1         <---------HSFB2a(2) <---------MYB52(1) <---------AHL20(1)      <---------HSFC1(2)  <---------YAB1<---------YAB1            <---------ZAT2 ------>YAB1      --------->LBD16        <------MYB83     ------>MYB46(1)     <-------TEIL ------ATHB12   <---------LBD16         --------->MYB59 --------->TOE2(2)    --------->GLK1(2) --YAB1--------->HSFB2a(2)           <---------STY1(2)  --------->TOE1(2)   <---------ARR14(2)    <--   tgatatattcgagaaacttgcgcaagaagcttcaaaattagctaggtataataagaaacctacgattacttctagggagattcagacagctgttagacta  12334500                                                                                             <-------                                                                                             ------->TEIL                                                                                             --------                                                                                             <-------                                                                                    <---------TOE1(3)                                                                                    <---------TOE2(3)                                                       <---------TOE2(3)         <---------MYB52(1)         <---------ZAT18                        <-------GAMYB               <-----------GT1  <-------   <---------ANAC46                            ----------->GT1        <---------TOE2(2)      --------   ----------->RAV1(2)                         <---------MYB46(3)     <---------TOE2(3)     <-------- <-----------GT1                           <---------TOE2(3)          <---------TOE1(2)     <-------- -------ZAT6                            <---------MYB52(2)       <---------ARR11(3) --------->MYB59   gtgttacctggtgaacttgctaagcatgctgtttctgaaggaactaaggctgttactaagtttactagctcttaggtttagccgtttaggtttcgaatct  12334600  Previous    Next  AGI:  At2g28720.1    Description:  histone H2B, putative. Identical to Histone H2B.3 [Arabidopsis Thaliana] (GB:Q9SI96); similar to HTB4, DNA binding [Arabidopsis thaliana] (TAIR:AT5G59910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68858.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21711.1); similar to unknown [Populus trichocarpa] (GB:ABK94388.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2B; (InterPro:IPR000558) Range:  from: 12334055    to: 12334755    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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