Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         --------->AGP1                                                         <---------AGP1                                                   <---------YAB1                                               <---------ARR11(3)                          ----------                                               --------->ARR11(3)                         --------->DAG2                                               <---------GLK1(2)               <------NtERF2                        ----------->GT1     <---------WOX13(1)       --------->YAB1      ---------->DOF2 ------>DAG2            <------MYB46(1)  <---------YAB1  --------->ARR11(3)  --------->ETT(1) ------>DOF2            <------MYB83--------->KAN4(1)    <---------ARR11(3)  <---------ANAC46 --HVH21         <---------AHL20(2) <---------KAN4(1)   <---------CCA1(2) <-----------RAV1(1)     <--   aaagtacaagaagtcacattttatgtaggtgaaatggattgttctgatagattttcatagatcttagagttttataatgtcggagttaactaaaagtaaa  12315300                                                                           -------->ATHB1                                                                     --------->ANAC58                                                                     --------->ANAC58                                                             --------->YAB1<---------ICU4                            <-----------GT1                 <---------ATHB12             --------->ANAC58               ---------->DOF2                       <---------GLK1(1)     --------->YAB1--------->ANAC58           ---------->DOF2 <---------YAB1            --------->GLK1(1)    <---------ATHB12 ->GT1----------->GT1    <---------ICU4       --------->ATHB12       --------->ANAC46<------ZmHOX2a(1) ---------RAV1(1)      <---------GLK1(2) ---------->DOF2  --------->WOX13(1)        <----------ID1   atgttgggaagaaaaaagaaagatagattattactcagtaaaccaaagtgattagaattccaatcacacacacacaatcattctgaaggacaagactcta  12315400                                                          >>>>>>>>>GT-1                          <---                                      --------->AtLEC2 <------MYB83                              ----                         --------->AHL20(2)            <------MYB46(1)              <----------DOF2 <                         <---------AHL20(2)       --------->ATHB12        --------->ANAC46  <-------TEIL               <---------AHL20(2)     <---------YAB1   ----------->GT1  <-----------------AGL1   <---   gaattgatcatccatataaaaatgcaaaaaattgaacatcatgctaaaatgttgatttggttaatagaacaattacacaaaatggcctttaaaattcata  12315500             -------->P            <-----------GT1          <---------MYB52(2)     <------ZmHOX2a(1)                  ------>MYB83   <---------TOE2(3)                    ------>MYB46(1)    <------------------------ANAC81   <---------TOE1(3)                  <---------MYB59    <------MYB46(1) ------AHL20(2)                      --------->ANAC58    <------MYB83                               < ----->AHL20(2)               ------>MYB83              <---------AtMYB61                  --------->CCA1(2) ---------YAB1      ----------->GT1  --------->ANAC58   --------->MYB59               ---------->DOF2 ------YAB1 --------->MYB52(1)------>MYB46(1)     <---------MYB52(1)         <---------ANAC46--------   ttattaaggaaaactaacctcttggtaaaaccaaatagaacccaactcttccatttgtttggtctcttctcttcttgtttcttagagagaaagagataag  12315600         <----------DOF2       ---------->ID1       <------------------------ANAC81  --------->GLK1(2) <---------ARR11(3) <---------GLK1(2) --------->ARR11(3) ---------RVE1(1)                   ---------->DOF2   ---------->DOF2   <----------DOF2           --- ->CCA1(2)               <---------ANAC46   <------ZmHOX2a(1)         ---------->ID1   <---------ANAC46   agagattttgtcttttcttctctggtttcttagagagataaagagaggaacagagagaaagagagatagtttgtcttttttctctggtttcttagagaga  12315700                                                  <---------YAB1                                           <---------ANAC58                                           <---------ANAC58                                         <---------ANAC46                           <-----------RAV1(2)   <-----------TBP                           =====================RAV      --------->ZAT14                       --------->At4g35610<---------MYB46(3)    >>>>>>>>>TBF1                  ------     *TSS              <-------GAMYB<-----------RAV1(1)  <---------ZAT14            <------ZmHOX2a(1) ------->DOF2         --------->ALFIN1 <---------ANAC46 <---------ZAT6             <----------ID1   taaagagagtaatagagagagagggagttgcagggggaatgttgtgggtgttcttatagtgtagaagaagaaggcatagcaagagaggacaagagggagc  12315800                       <---------AHL20(2)                      --------->AHL20(2)                                <---------YAB1                      <---------AHL20(1)          --------->YAB1   <---------AHL20(2)                      <---------AHL20(2)         ----------->GT1  --------->AHL20(2)                --------->YAB1                   <---------YAB1  <---------WOX13(1)             <---------bZIP60(1)               --------->YAB1  -------->HAHB4         <-----------HVH21                    --------->ICU4   --------->ATHB12  <---------ANAC58 <---------ICU4           ---------->DOF2    ----------->GT1  <---------ANAC58--------->ICU4       ----------->GT1        <---------YAB1  <---------ANAC46<---------YAB1      --------->YAB1          --------->ICU4                   ------ ------>CBF  --------->bZIP60(1)     --------->ICU4 <---------YAB1<---------AHL20(2)           <-----   aatgtcgttcatgtcatgtcataattttttttaaaaacaattagtataaagatgataatagaaaatgattaattttgtttgactcgaaaacttggtaaga  12315900                                                                                                  <--                                                                                                -----                                                                                           <---------ATHB51                                                                                           <---------AHL20(2)                                                                                          <---------AHL20(1)           ------>ZmHOX2a(1)                                                           --------->AHL20(2)           <----------DOF2                    ------>ZmHOX2a(1)                      ------>ZmHOX2a(1)        ---------->ID1                       --------->TOE2(3)                      --------->TOE1(3)   --------->ARR14(2)                    <----------DOF2                 <----------DOF2 --------->YAB1 --->At4g35610                     <---------At4g35610        ---------->DOF2       --------->TOE2(3) ----At4g35610                     --------->At4g35610    <---------ALFIN1   ---------->ID1--------->AHL20(2)   tgccatatttgtcctttctctctccctagcagcactgagctatctttcctaaaacctctcccacttaagcagggactttgtctcttccttaaaataattc  12316000                                    ----------->HVH21    ------->TEIL                                  <---------AtLEC2      <---------AtLEC2         <---------AHL20(2)                                --------->AtLEC2       <-------TEIL            <---------YAB1      --                                <---------YAB1        --------->AtLEC2      --------->AHL20(2)    ---  <-----------GT1            <---------ATHB12    --------->ANAC46      <-----------GT1            <-- -------MYB52(1)       <-----------GT1       <-----------GT1        <---------ICU4          --------- ------>GT1 <-----------GT1  <------ZmHOX2a(2) --------->ANAC46<---------YAB1--------->YAB1 ---------   gttatttccatgttttaccattttttaaccgatcatgcatgacatttatacacaacatgcatgttatgacttattacatttattattttgtttatagtaa  12316100     -------->HAHB4     --------->YAB1     <---------ICU4    --------->ICU4  --------->YAB1                                                                                  ---  <---------ICU4                                                                        --------->ARR11(3) <---------AHL20(2)     <---------AHL20(2)                                              <---------AHL20(1) <---------YAB1         --------->AHL20(2)                                              --------->AHL20(1) ------->YAB1      --------->AHL20(2)                                                   <---------ARR11(3) ------>AHL20(2) --------->TOE2(3)                          <---------AHL20(2)       --------->AHL20(2) -------AHL20(2) <----------DOF2                           --------->AHL20(2)   ----------------->AGL3 >YAB1      <----------DOF2 <-----------GT1           ----------->GT1     <---------TOE1(3)      ---- -->GT1   ------->TEIL --------->AHL20(2)         <---------AHL20(2)      <---------TOE2(3)  --------   tttataattatgaactttactttaaatttataactatgtgtataaagtttcttaaattgtattaaatgttttggttaatgtttccaaaaatatatcaaag  12316200  Previous    Next  AGI:  At2g28690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21721.1); contains InterPro domain Protein of unknown function DUF1635 (InterPro:IPR012862) Range:  from: 12313967    to: 12315705    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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