Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------AHL20(2)                                                           <---------AHL20(2)                                                         <---------AHL20(2)  --------->AHL20(2)                                                         --------->AHL20(2)<---------AHL20(2)                                                       --------->AHL20(2)  --------->AHL20(2)                                                       <---------AHL20(2)--------->AHL20(2)                                                     --------->AHL20(2)  <---------AHL20(2)                                                   <---------AHL20(2)  <---------AHL20(2)                                                   --------->AHL20(2)--------->AHL20(2)                                               --------->AHL20(2)    <---------AHL20(2)                                               <---------AHL20(2)<---------AHL20(2)                                             --------->AHL20(2)  --------->AHL20(2)    <---------At4g35610                                            <---------AHL20(1) --------->AHL20(2)  --------->ANAC46                                            --------->AHL20(1) <---------AHL20(2)  --------->ANAC58                                    <-------TEIL --------->AHL20(2)<---------AHL20(2)  --------->At4g35610                                <---------TOE1(2)<---------AHL20(2)--------->AHL20(2) --------->MYB52(1)   --------->ANAC58   --------->MYB52(1)   --------->AHL20(2)--------->AHL20(2)    --------->ANAC58<-   --------->ANAC58  ------->GAMYB --------->CCA1(2) <---------AHL20(2)--------->AHL20(2)        ----   --------->ANAC46 <---------MYB52(2)   --------->AHL20(2)--------->AHL20(2)<---------AHL20(2) <----   aatgcaagcaaaaaaaaaaacaactaacacatcgtagatacaaaaatatatatatatatatatatatatatatatatatatatataagcaactgatttat  12311500                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                     --------->AHL20(1)                                                      --------                   <---------ARR11(3)                                                        <-------                   --------->ARR11(3)                                                        <-------         ------>ZmHOX2a(2)                                                                   ========        <------ZmHOX2a(2)                                                                    --------        --------->CCA1(2)                                                                    <-------       <-----------ARR10                                                                     <-------       --------->ARR14(2)                                           <------MYB83             <-------       <---------ARR11(3)                                           <------MYB46(1)          --------       --------->AGP1<---------AHL20(1)                             ----------->GT1          ========       --------->ARR11(3)                                ----------->GT1                    ---------       <---------AGP1--------->AHL20(2)                 --------->HSFC1(1)                  <--------       <---------ARR14(2)                               <---------HSFB2a(2)               -----------      <---------CCA1(2)                                ------>ZmHOX2a(2)                  -----------     ----------->ARR10  <---------AHL20(2)           --------->ARR11(3)           ---------->DOF2 --------WOX13(1)  --------->AHL20(1)                <---------ARR11(3)        --------->AHL20(2) ----->ATHB12      <---------AHL20(1)            --------->YAB1    --------->MYB59=================== -----YAB1        --------->YAB1      --------->MYB46(3)--------->HSFB2a(2)  --------->TOE2(3)   gattgatcagatctgaacaaaaatattttatggacagagaacaaacaaaactcatgatctagaaaaaatttggttaaaacattaaaaagagagtgacgtg  12311600 ---------->DOF2 --bZIP60(2) --TGA1a ->TGA1a --O2 --ANAC55(1) --bZIP60(1) ->bZIP60(1) --TGA2(1) --ANAC58 ===========bZIP_DOF ->O2 --ANAC46 --ANAC58 --ANAC55(2)             --------->TOE2(3) ->ANAC55(2)             --------->TOE1(3) ========================bZIP_DOF -->STF1               ------->TEIL                                         --------->ANAC46     <--- ---------------TaNAC69(2)                                                  --------->ANAC58     <--- >HVH21             --------->ANAC58                                        --------->ANAC58     ---- >TGA1              --------->ANAC58                               <------ZmHOX2a(1)             ---- ==bZIP_DOF   ---------->DOF2         --------->ANAC46         <---------ANAC46                ------   atcaaaaggaagattgtaaagcacgaaccttgaagaacataagcgaccttgggggagtcagagtagcgaggaagagccaagccatacttctcaagagcga  12311700                                                                                            <--------                                                                                 --------->SPL7                                                                  <---------ALFIN1<---------ALFIN1                                                                 --------->MYB46(3)   <---------DAG2                                                        <---------------AtSPL3 --------->LBD16                                                       ---------->DOF2     ------------------>SPL14                                                    --------->AtLEC2    --------->ARR14(2)  ---------                                                    --------->ANAC58  <-----------HVH21    <---------LBD16       >>>>>>>>>>>>>>>>>LFY                         --------->ANAC58 --------->DEAR3(1)   <---------LBD16 ------At4g35610                                 <------NtERF2   --------->DEAR3(2)   <----------DOF2 ------ZAT2           <---------LBD16         <---------ZAT18    <---------MYB55(2)  <---------DAG2 ----->ZAT2           <---------HSFB2a(2)     --------->ZAT18   ------->TEIL------>ZmHOX2a(1) ----->At4g35610      --------->HSFB2a(2)   --------->ANAC46 --------->ANAC58  <---------SPL7 --->ZAT18     <-----------GT1          <-----------HVH21    --------->ANAC58--------------->AtSPL8   gcttagaggctccaatgttaccatctcggagcattggcaactcttcagggcaccatgcaaagtacgaaccaccgtctcctccgtacacctttttcgggag  12311800                                                                     --------->ARR11(3)                                                XXXXXXXXXXXXXXXXXXXX>MIR400          <------ZmHOX2a(2)                    <---------YAB1        <---------ARR11(3)         --------->AGP1                      --------->YAB1          <---------AHL20(1)      <---------WOX13(1)                    --------->ICU4           --------->AHL20(1)      -------- -HSFB2a(2)                       <---------ARR11(3)              --------->AHL20(2)----------->GT1 >HSFB2a(2)          ----------->GT1------>ZmHOX2a(2)     ---------->DOF2   *TSS ------------>MYB.PH3(2)   ccttggtgatagatccaattccattgttaaacacttgatctaaacgattatgagagtatcaaaagtaagaaaatatttgagaaagtttgttaaaaatatc  12311900                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                          ------->TEIL                                                                          <---------ARR11(1)                                                   <---------AHL20(2)    <---------ARR14(1)                                                  --------->AHL20(2)     <---------CCA1(2)                   <-----------TBP            <---------MYB52(1)       --------->ANAC55(2)                  ------->TEIL               <---------MYB52(1)        <---------ANAC55(2)               --------->ANAC55(1)          ----------->GT1         --------->ARR14(2)               --------->ANAC55(2)        <---------LBD16           <---------ARR14(2)        <------               --------->ANAC58         --------->ARR14(2)      <---------LBD16               <------               --------->ANAC58         <---------ARR14(2)  --------->ARR11(3)                <------   <------ZmHOX2a(1)       <------------CBF --------->LBD16 <---------GLK1(2)            <---------ICU4  ----------------------->TaNAC69(2)   <---------GLK1(1)    <---------ARR11(3)    <---------ANAC46 ->RVE1(1)     <---------ANAC55(2)     <---------CCA1(2)   <---------RVE1(1) <----------DOF2<--------   gaataggaagagagagcacgtatttatagtattgagaattcatatccggttatttaatgagagattttcggaaacgtatctttgacttggataattactt  12312000                                          ----------->GT1        <---------TOE2(3)                <---------TOE2(3)     <---------AHL20(2)               <---------ATHB51 ==========================================================================================MADS_MADS <-----------------AGL3               <---------AHL20(2)  <-----------GT1 ---ANAC58                     ----------->GT1           --------->AHL20(2)          --------->GLK1(2) ---ANAC46              ----------------->AGL1     --------->TOE1(3)              <---------ANAC55(2) ---ANAC58        <---------YAB1   --------->AHL20(2)    <---------AHL20(2)<---------------AGL15   <- -AHL20(2)   <---------ICU4<---------ARR14(2)      --------->TOE2(3)       --------------->AGL15<----   ggaccaatttatggataattacgatggccaatatggataaattatggataataccttaattaactaattcatattttcttcaacaagtatctatttcaat  12312100      <-----------GT1 <---------ANAC55(1) <---------ANAC58                                         <---------ATHB12 --------->ANAC55(2)                                   <---------AHL20(2) <---------ANAC55(2)                                --------->YAB1 <---------ANAC46         <-----------GT1     --------->YAB1 <---------ANAC58      --------->YAB1    --------->AHL20(2)                --------->AHL20(1)     --- ----------GT1<---------ICU4           >>>>>>>>>GATA-1 --------->AHL20(2)  <---------AHL20(1)    ---- -----ICU4   <---------ATHB12     --------->YAB1  --------->AHL20(2)      <---------CCA1(2)<---------YAB1   attacgtattactaaatcatttcatttataactccataatagataaaatcatattaataaatcatgtatacaacttatatattaagacataacatcatag  12312200                                                                                 ------>ZmHOX2a(2)                           --------->AHL20(1)                                   <------ZmHOX2a(2)                           --------->AHL20(2)                                  <---------ARR11(3)                           <---------AHL20(2)                                  --------->ARR14(3)                           <---------AHL20(1)                                  <---------ARR14(3)                          --------->AHL20(2)                                   --------->ARR11(3)                          --------->YAB1                                       --------->ARR14(2)           <---------AHL20(2)                                                  <---------ARR14(2)           --------->AHL20(2)                                               <---------TOE2(3)          --------->AHL20(1)                   <---------ANAC58        --------->ATHB12          --------->AHL20(2)                   <---------ANAC58       <---------YAB1          <---------AHL20(2)<---------YAB1     <---------ANAC46       <---------AHL20(2)           --  ----------->GT1      ------>ZmHOX2a(1)    ------>ZmHOX2a(1)     --------->AHL20(2)           <----- ------>CCA1(2)<---------AHL20(2)          --------->TOE2(3)      <---------AHL20(2)           ------ ----->ARR11(1)--------->AHL20(2)<-----------GT1            ----------->GT1<-----------GT1    -------   atatgagttaaatttaataaaactcctattatattaaaccaatttccttacttgtatagaaatagtatttatattattgacgatcttgagtacaaatgat  12312300                                  <------ZmHOX2a(1)           ----------->GT1  <-------GAMYB                                                           <        <---------ANAC58   --------->MYB52(2)                        <---------At5g28300            -  --------->ATHB12     <---------YAB1                           ----------------------->TaNAC69(2) <- <---------YAB1   <---------AHL20(2)                           ----------->GT1                     -- ------->YAB1    --------->AHL20(2)                           --------->ALFIN1                     -- ----ARR11(3)    <---------AHL20(2)  <------ZmHOX2a(1)     <---------AtMYB61     <----------DOF2   <- --->ARR11(3)    <---------AHL20(1) ----------->GT1       <------NtERF2------->GAMYB <---------TOE2(3) -->YAB1<---------ANAC58   <---------MYB46(3)      --------->ANAC46 <-----------GT1  <---------TOE1(3)   attatcatttgcttagtaattaattttgtttgttgaggaggaaacaaaattatacgaggcagaggtggtataaccgtataagcctttaaggtttgaagga  12312400  Previous    Next  AGI:  At2g28680.1    Description:  cupin family protein. similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT1G07750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24149.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain 11-S plant seed storage protein; (InterPro:IPR006044) Range:  from: 12310040    to: 12311876    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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