Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->LBD16                                                                      --------->ANAC58                                                                      --------->ANAC46                                                                     <---------MYB55(2)                                                                     --------->MYB46(3)                                                                    ------>MYB83                                                                  <---------ALFIN1                    =================RAV                          --------->AtMYB61                    ----------->RAV1(2)               --------->ARR14(2)                    <---------At4g35610               <---------ARR14(2)                            -                    --------->At4g35610             <---------MYB52(2)--------->ANAC58              <                  <---------ALFIN1             --------->ANAC58   --------->DEAR3(1)              <--              ----------->RAV1(2)              <------MYB83       <---------MYB55(2)              <--              =======================RAV       <------MYB46(1)   --------->MYB46(3)               <--       ------->TEIL------->TEIL                --------->ANAC58--------->AtMYB61                 <---      <---------ARR14(2)        --------->At4g35610--------->ANAC58 ------>MYB46(1)              ----    ----------->HVH21    ----------->RAV1(1) <--------P  --------->TOE1(3)---------->DOF2     -------  --------->At4g35610<-------PIF5          <---------MYB46(3) --------->MYB46(3)          --------->ARR14(2)  <---------At4g35610------->PIF5         <---------ZAT6----------->RAV1(2)               <---------ARR14(2) -->AtMYB61<---------MYB52(1)  <---------MYB46(3)  --------->ANAC58--------->ABI4(1)<------ZmHOX2a(1)   caagagctgaaccggtacctgcacctgcaccagtggctgaaccagtggtaggcaaggaacctgaaccaccacccgctaaagaaccaggaacagaactggc  12308500                                                                                                ----- <------MYB83                                                                           ----------->RAV1(2) <------MYB46(1)                                                                  <---------At4g35610 -------->MYB111(1)                                                               --------->At4g35610 ---------MYB46(3)                                          --------->At4g35610 <-----------RAV1(2)-- -----GAMYB                                       <---------ALFIN1        --------->TOE1(3)   ------>ZmHOX2a(2) -------ZAT2           <---------ALFIN1          <---------ZAT14 <---------HSFB2a(2)    ============= -------At4g35610     --------->MYB46(3)         <---------ABI4(2)       ----------->RAV1(2)--------- ------MYB46(3) ----------->RAV1(2)           ----------->RAV1(2)--------->HSFB2a(2)----------->HVH21 ----->MYB55(2) --------->At4g35610          ------->TEIL   <---------At4g35610 ===================== ----->AtMYB77<------ZmHOX2a(1)      <-----------GT1 --------->DEAR3(1)<---------ARR14(2)   <--------   agttggtagaagaccaggacctgaaccacttgatggtattgaccctgtacctgcaccgagaccgcttccagtagaacctgaaccagatgaccctgatcct  12308600                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                 <---                                 <---------WRKY18(1)                      ------->TEIL      <--------                      --------->TOE1(3)                               --------->TOE1(3)   <-------GAMYB         <---------ARR14(1)--------->MYB46(3)                        ----------->RAV1(2) <------MYB46(1) --------->AtMYB61   ----------->RAV1(2)                        --------->ALFIN1         <------MYB83 ->ZmHOX2a(1)      --------->ARR14(2)                       <---------LBD16----------->RAV1(2)<------ --------->RAV1(1) <---------ARR14(2)                     <---------ARR14(2)             --------->MYB55(2) ==========RAV --------->LBD16  ----------->HVH21         --------->ARR14(2)             <---------MYB46(3) >ARR14(2)--------->ARR14(2)    --------->WRKY12 --------->AtMYB61 <---------ARR14(2)   --------->ALFIN1 ==========RAV<---------ANAC46--------->O2     ----------->RAV1(1) --------->ARR14(2)   <---------AtMYB61 -ARR14(2)<---------ARR14(2)<---------ALFIN1------>ZmHOX2a(1) --------->LBD16      --------->MYB52(1)   gcaccaaaaccgaatcccgtggaacctgaaccacttgaccctgttcctgcaccaaaaccaattccggtggaacctgaacctgagccaagggtggttgtgg  12308700                                              ----------->GT1                                             --------->DAG2                                            ---------->DOF2                                      --------->ZAT2                                      <---------At4g35610                                    <-----------RAV1(2)                                    <------NtERF2                                           ------>MYB83                                   --------->LBD16                                          ------>MYB46(1)                                  --------->RAP2.3(2)                                      --------->ANAC58 ------->ZAT2                     --------->DEAR3(1)                                       --------->ANAC58 --------At4g35610               --------->RAP2.3(1)                                       --------->ANAC46 --------ZAT2                  --------->ARR14(2)                               --------->ARR11(3) ------->At4g35610             <---------ARR14(2)                               <---------ARR11(3) -----P         <---------------AGL15 --------->At4g35610                  ---------->DOF2--------->MYB46(3) -MYB46(3)------->TEIL       --------->DEAR3(1)                        ---------->DOF2 <-----------GT1 ---AtMYB61     --------------->AGL15 <---------ZAT2      <---------ARR11(3)    --------->GLK1(2)   tagctgagaatgcattttcttcatcaagaagccgagccgcagctgcaaaagtaacaacaagagctataaccagtaaagaaagtatcttttgaccagccat  12308800                                                            <---------YAB1                                        <---------ANAC46 <---------YAB1                                 <---------GLK1(2)  --------->ATHB12            ------------------------>ANAC81         -------->HAHB4                    <-----------TBP     ---------->DOF2           --------->ICU4      <---------YAB1                 ----------->GT1   --------->ANAC58       --------->ANAC58         <---------ATHB12           ---------->DOF2  <-----   --------->ANAC58       --------->ANAC58         --------->ICU4  *TSS <---------GLK1(2)  <-------TEIL   tgaacaagaaagatgatcactcagagagaagcaaagattgttgtttgaagtaaatgattgtgatgatagaatcaaattctcaaagagtatatatacatac  12308900                                                       <---------DAG2                                                       <----------DOF2                                                  ----------------------->TaNAC69(2)     ------------                                                 <---------MYB46(3)            <------MYB46(1)                                                --------->ALFIN1               <------MYB83                                               <-------PIF5                   <---------AtMYB61                                               ------->PIF5  <-----------GT1  --------->MYB59                                            <-----------RAV1(2)             <---------ANAC46 --TEIL  ----------->GT1                   <---------At4g35610            <---------MYB46(3)   ------   atgaaatgagatagttaatacaagaagatggagttgatgaaatggagcaggtggtcacttttttcacattatctagtggtttggttttggagaagaatca  12309000                                                                --------->At4g35610        ----------->GT1                                         <---------At4g35610 ---------->DOF2 ---------->DOF2 --------->YAB1                        <---------ICU4   --------->TOE2(3)       <---- ------------>ANAC81        --------->ANAC46       ------>ZmHOX2a(1)   <---------ZAT6      ---------- --->YAB1        <---------ICU4                   --------->TOE2(3)    ----------->GT1  --------->TOE1(3)   tataaaagaagagaaaaaatcataacttctccacaatatttgaatattagttcctcaaaattgctaagctgtaatgttaaataacccaaagcttaaagct  12309100                                                     <---------ARR11(3)                                                  ------>ZmHOX2a(2)            ----------->HVH21                                                <---------ARR11(3)          --------->ATHB12                                                --------->ARR11(3)  --------->DAG2                                              --------->ICU4       --------->DAG2                                         <---------ANAC55(2)      ---------->DOF2      <---------GLK1(2)                                         --------->ANAC55(2)  --------->AtLEC2<---------WOX13(1)                                        <---------ICU4 ------>ZmHOX2a(2) --------->At4g35610 ------DOF2                            --------->ICU4--------->ARR11(3)  <---------At4g35610 >DOF2                               --------->YAB1  <-----------ARR10  <---------DEAR3(1)         <-   tttccatctatctgctaatataaactaaacgagaatgcataataagtaatgatctgatcttaccatgaaaaaggtcgctgattgacagagattatcgtct  12309200                                         <---------ANAC58                                         <-------GAMYB                                         <---------ANAC58                                         <---------ANAC46                                        <---------DEAR3(2)                                        <------MYB83                                        <------MYB46(1)                                        <---------MYB46(3)                                        --------->MYB55(2)                                        --------->MYB52(2)                                       <---------TOE2(2)                                       <---------AtMYB61     --------->ANAC58                                       <---------TOE1(2)     --------->ANAC58                                    =========================HOX2a_HOX2a                                    ------>ZmHOX2a(2)        --------->ANAC46                                    --------->MYB52(2)       --------->ANAC55(2)                                    <---------MYB46(3)       <---------ANAC55(2)                                   <------ZmHOX2a(2)  ------>ZmHOX2a(1)                       --------->YAB1<-------GAMYB <-----------GT1                       ----------->GT1<---------MYB52(1)  ----------->HVH21                ----------->GT1    ==========================HOX2a_HOX2a               <---------TOE2(3)<---------YAB1    <-----------GT1 -----NtERF2 <---------ATHB12 --------->YAB1    ----------------------->TaNAC69(2) <---------ZAT18   cggcataaaaatccaataaggctaattgtaaatcacgatcgttggttgcatttttcctctctcacgcatttcatcgaacgtcttgtgaacaccttctcca  12309300                                 --------->ANAC58                                 --------->ANAC58                                      --------->RAP2.6(2)                                 --------->ANAC46                                      ----------->RAV1(1)                             --------->YAB1                                         --------->ANAC58                            <---------YAB1                                          --------->ANAC46                    <----------DOF2                                        <---------ANAC58                    ------>ZmHOX2a(1)                             ----------->GT1   --------->ANAC58          ------>MYB46(1)  <---------AHL20(2)                    ------>ZmHOX2a(2)---------->DOF2   <          ------>MYB83     --------->AHL20(2)                 --------->ATHB12  <---------YAB1   ----        <---------MYB46(2)--------->YAB1               --------->AtMYB61   <---------ANAC58   <------        <---------MYB59  <---------YAB1             <---------ALFIN1      <-------TEIL<----------ID1-   atctccattaccaaaccaagtcctttgattataatacccaagacttacacaatcccacctccattgatcggttaaattcgtgatgaaagccacaaacttt  12309400  Previous    Next  AGI:  At2g28671.1    Description:  contains domain PRICHEXTENSN (PR01217) Range:  from: 12307280    to: 12309113    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g28670.1    Description:  disease resistance-responsive family protein / fibroin-related. similar to disease resistance-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G07730.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN77499.1); contains InterPro domain Plant disease resistance response protein (InterPro:IPR004265) Range:  from: 12307336    to: 12308867    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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