Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------ANAC58                                             <---------AtLEC2                                             <---------ANAC58                                       <---------AHL20(2)                                      <---------AHL20(2)                                      --------->AHL20(2)                                 --------->ARR11(3)              --------->STY1(1)       <---------AHL20(1)                                 <---------ARR11(3)              <---------STY1(1)   <---------AHL20(2)                                     <---------AHL20(1)           --------->ZAT6         --------->AHL20(2)                         ---------->DOF2   ------          -------->P             --------->AHL20(2)                      <----------ID1  --------->AHL20(1)       <---------MYB52(2)     <------------------------ANAC81   ----------->GT1        --------->GLK1(2)   cttaggctcactaaccctagggattgctcttcttatttaatttttttgcatgttctcatttgaagagagcaaaaatcgacaaagaagagaatattttttg  12302000                     <---------YAB1                   --------->YAB1                  <---------YAB1                 <---------AHL20(2)                --------->YAB1                                                                      <               <---------YAB1                                                                      <-         --------->ARR14(2)                                                  <---------ANAC58  <-----         <---------ARR14(2)       <----------ID1                             <---------ANAC46--------         --------->GLK1(2)      <-----------GT1                         <----------DOF2     <--------         ------->TEIL----------->GT1           ------->TEIL--------->ZAT6    <---------ANAC58-------- ----->GT1  <---------YAB1    <---------AHL20(2)         <-----------GT1<---------DAG2 --------->ANAC46   ttaaaactctgaatctgattataatgaaaaattttaacgacaaaaaatggacgtagtttttacactatgcatcactttttcttgtaaaccctccattatt  12302100                                       <---------ANAC58            --------->TOE2(3)       --------->AHL20(2)              <---------ANAC58      <---------YAB1       <---------AHL20(2)              <------MYB83         <---------AHL20(1) -----------GT1           ----------->GT1                   --------->AHL20(1) ----------GT1       <------MYB46(1)   <------MYB46(1)      --------->AHL20(2)                    --- ----YAB1            <------MYB83 <-----------RAV1(1)      --------->YAB1                   --------- ->ATHB51  --------->YAB1 --------->YAB1                <---------AHL20(2)           --------->YAB1-- -MYB52(1) --------->AHL20(2)   <----------DOF2        --------->AHL20(2)            --------->AHL20(2) ->AHL20(2)<---------AHL20(2)<-----------GT1 <----------DOF2<---------AHL20(2)    ----------->GT1----   ttaaactttttaattatatcatttggtatagtaactttgttgggtttctttttcttatttaatataatacatcaaattttgggacaataaaaaatcaaat  12302200                                                  <----------DOF2                                  <-                                          --------->ANAC46                                         --                                          --------->ANAC58                                        ---                                      <------ZmHOX2a(2)                                         -----                                  <------ZmHOX2a(2)                                             -----                                 --------->ARR11(3)             ------>ZmHOX2a(1)            --------                                 <---------ARR11(3)   <-----------GT1                       <--------                            <-------TEIL  --------->ANAC58<---------ALFIN1     --------->PCF2<------- ------>DAG2              --------->ARR14(2)     <---------ANAC58             <------ZmHOX2a(1) <---- >AHL20(2)                <---------ARR14(2)     <---------ANAC58          --------->CCA1(2)--------- --------->GT1        <-------TEIL=====================================HOX2a_HOX2a        --------->YAB1 ------>DOF2         --------->ALFIN1 =================================HOX2a_HOX2a       <---------YAB1   aaagtaaaatagcaatttagaaggtgcagattcaagatcgatccaagaaatgcttttcacacactccttctcatgagataggacccattctataataata  12302300     <---------DAG2                             ------>MYB83     <----------DOF2                            ------>MYB46(1) --------ARR11(3)                          <-----------GT1 ------->ARR11(3)                         --------->DOF5.7(2) ------>CCA1(1)                     -------->HAHB4 ---->YAB1                          --------->ATHB12                                               -- ---->AHL20(2)                  <---------AHL20(2)                                                 -- ->YAB1                        --------->AHL20(2)                                            -------- -YAB1                  --------->YAB1    <---------MYB52(1)                          <---------ICU4 --ICU4            ------------>CBF<---------ATHB12  <----------DOF2        --------->ICU4   -------- -----ICU4--------->TOE1(3)    <---------AHL20(2)  ------>ZmHOX2a(1)      --------->WOX13(1) -------- >ICU4    --------->TOE2(3)--------->AHL20(2) <---------MYB59           ------------>CBF   --------->ANAC46   atatctactttaccttaacaaaacaattttaaaataaatgattcgttaccttcctctttaaaactcgtattagtagcaattagtcgcataatcacacgac  12302400      --------->TOE1(3)      --------->TOE2(3)     --------------->AGL15    *TSS <----------DOF2         --------->DAG2 ---->MYB46(1)          ---------->DOF2                                  ---------->DOF2 ---->MYB83       ------->GAMYB <---------ZAT6                   --------->CCA1(2) ->ANAC58        --------->MYB46(3)                           <---------YAB1 ->ANAC58       --------->At4g35610                         ---------->DOF2  ----------->GT1 ->ANAC46      --------->MYB52(1)                   ---------->DOF2 ---------->DOF2---------->DOF2   caactttcccttaaaatcaacagacagaaagtgagtgttatagacttatagtgagaaagagataaagatagaaagaaaagagagaaaaagagagaatgag  12302500                                                                                                    <                                                 --------->ZAT18                          <----------DOF2                                        --------->ANAC46                                <------ZmHOX2a(2)                                        --------->ANAC58                               --------->AGP1                                      <---------SPL1(1)                                <---------ARR14(3)                                    --------->DEAR3(1)                                 <---------AGP1                                 --------->DEAR3(1)                                    --------->ARR11(3)                                 ------->GAMYB   <---------ZAT14                       <-----------ARR10                                --------->MYB46(3)                                     <---------ARR14(2)                                --------->DEAR3(2)                                     <---------ARR11(3)                                <---------MYB55(2)                                     --------->ARR14(3)                               -------->P        --------->ZAT14                <-----------HVH21----                        ------>NtERF2 --------->SPL1(1)                       <---------AtMYB61  ----                        --------->LBD16 --------->ANAC58                  <---------LBD16------>ZmHOX2a(2)              <---------At4g35610------------------>SPL14   --------->ANAC46--------->LBD16      ----          <-----------GT1    --------->MYB46(3)  <---------ZAT18   --------->GLK1(1)  <---------CCA1(2)      <---------RVE1(1)--------->ANAC46--------->SPL7 --------->ZAT14    --------->MYB52(1)    ------   <---------ZAT6     <---------LBD16<---------SPL7 --------->ANAC46    <-----------GT1--------->ARR14(2)   atttagtgatattttctgctcttctccggcatcaaccgccgtacgacatagtacacttcaccacgacggaaatgttaccggaggtcgcagatctttccaa  12302600       --------->LBD16                                                                        <------      --------->HSFB2a(2)                                                                     -------     <---------LBD16                                                                     ============   --------->DEAR3(1)                                                                    --------->O2   --------->AtMYB61                                                                     <---------ANAC55(2)   <---------ALFIN1                                                                      --------->TGA1a  <---------ZAT2                                                                         <---------O2  --------->ZAT2                                                                         <---------TGA1a <---------ATERF1(1)                                                                 <-----------HVH21 ------>NtERF2                                                                       <-----------TGA1 ---------ALFIN1                                                                    --------->bZIP60(2) ----->ANAC46                    ----------->GT1                                    --------->ANAC46 ----->ANAC58                    <------ZmHOX2a(1)<---------ANAC58  ===============================bZIP_DOF ----->ANAC58     --------->TOE2(3)       <-----------HVH21 --------->LBD16         --------->O2----- ---->DOF2------>NtERF2         ----------->GT1   <---------ANAC58  <----------DOF2------>ZmHOX2a(1)   agccacctccggagccaaaaccctagtaagaagaaggataaaactgtcccttgcttctcttccgagatgcctttaatccctattcctcgtcacttgagct  12302700                                                                                           <---------TGA1a                                                                                           --------->TGA2(1)                                                                                           --------->TGA1a                                                                                           <---------TGA2(1)                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                                                           <---------bZIP60(1)                                                                                           --------->bZIP60(1)                                                                                           <---------O2                                                                                      <---------ZAT2                                                                                      --------->ZAT2<                                                                               --------->DAG2       <                                                                              ---------->DOF2       <                                                                              =======================bZIP_DOF                                                                              =======================                                                                            <------NtERF2  <---------ANAC55(2)                                                                           --------->LBD16 --------->ANAC55(2)                                                                          --------->LBD16  <---------ANAC58                                                                          --------->RAP2.6(2)       <                                                                          --------->RAP2.3(2)      <-                                    ---------->DOF2                      <---------LBD16 <---------TGA2(2)        <----------DOF2           --------->LBD16                       --------->LBD16 ----------->HVH21 ---At4g35610                   --------->SPL7                          ------>NtERF2 --------->At4g35610 -->At4g35610                 <---------SPL7       <---------LBD16     --------->ANAC46 ----------->TGA1 ==================bZIP_DOF  <---------ANAC58  <---------At4g35610  <---------ARR14(2)<---------At4g35610 ------>GT1  ------->TEIL    <---------ANAC58<---------DEAR3(1)     --------->ARR14(2)----------->RAV1(2)   gtagaaactcctttgaatctccaagcgggtttcgtccgaaaatcgcttcggctcgcggtagcgatgttcaaatccgccggaaaagctctgctgacgtaag  12302800          <------ZmHOX2a(2)                              <------ZmHOX2a(2)         --------->ARR11(3)                              ===================================HOX2a_HOX2a        --------->GLK1(1)                               <---------ARR11(3)           ================      <------ZmHOX2a(1)      <---------At4g35610        --------->ARR11(3)           ================ ---------ANAC46        --------->At4g35610         ---------->DOF2               <---------ICU4 ---------ANAC58        <---------At4g35610    <----------DOF2                 --------->YAB1 ---------ANAC58 --------->GLK1(1)          <---------ARR11(3)                --------->ICU4 =========bZIP_DOF <---------ZAT14          --------->ARR11(3)                <---------YAB1      --- ---------TGA1a  <---------GLK1(1)         --------->GLK1(1)          ---------->DOF2<------ZmHOX2a(1) ----------------------TaNAC69(2)      <-----------RAV1(2)--------->YAB1--------->DAG2           <---   tgacttgaggagatcaaggagttctctgctaagctcatcgtccaggtatcttttaaaagatcataagtctttgaaaggtgatgataaggacctctggtta  12302900  Previous    Next  AGI:  At2g28660.1    Description:  copper-binding family protein. similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G37390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21730.1); contains InterPro domain Copper chaperone, chloroplast-targeted, predicted (InterPro:IPR016578); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 12302404    to: 12304194    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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