Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                              ----------->GT1                                  <-----                                            <---------O2                                       <-----                                            ===================================bZIP_DOF        ------                                            <---------TGA1a                                    <-----                                         ----------->TGA1--------->YAB1                       -------                                         ----------->HVH21                                    <------NtERF2           <---------ALFIN1            --------->At4g35610                                    -------         ------>ZmHOX2a(1)             <---------At4g35610       <-----------GT1            ---------       <---------ANAC58         <---------AHL20(2)      --------->ICU4     <-----------GT1<---------ANAC58       <---------ANAC58         --------->AHL20(2)    --------->YAB1       --------->MYB52(1)<-------    --------->GLK1(1)           --------->AHL20(1)    <---------ICU4<----------DOF2       <---------ANAC58    <---------GLK1(1)          <---------AHL20(2)    --------->ICU4 <---------DAG2 --------->MYB52(2) <---------TOE2(3)             --------->AHL20(2)    <---------ATHB51 --------->AHL20(2) ------->TEIL   tttgagatttcctgcacattcaaacaaactaaattaaattgtgctgacgagtgaaataatgatgtttttactttatataacggattagttgtacgtggcg  12207400       <---------At5g28300   <----------DOF2  ------>ZmHOX2a(2) <------ZmHOX2a(2) -------->ARR14(2) ---------ARR11(3) -------->ARR11(3) ---------ARR14(2) ------>DEAR3(1) ---NtERF2 ----->RAP2.3(1) ----->ATERF1(1) ->NtERF2            <----------DOF2 -----RAP2.3(1) <---------ICU4 ----ANAC46     <--------ATHB1 ----PCF2<---------ETT(1) <---------ETT(2) --->DEAR3(1)   --------->YAB1                                                 --------->WOX13(1) ----DEAR3(1)  --------->ICU4        --------->ICU4                           --------->AHL20(2) -->ATERF1(1)  <---------ATHB51--------->ANAC58                               <---------AHL20(2) -->RAP2.3(1)  <---------ATHB12--------->ANAC58                         ----------->GT1 >ALFIN1--------->DEAR3(2)--------->ETT(2)<---------AHL20(2)<---------TOE2(3)--------->ICU4 --ATERF1(1) --------->YAB1    --------->ANAC46 ---------->DOF2--------->CCA1(2)                 ----   ccgatcttttaccgacaataattctttgtctacaagaaaatgatttttttgaaagggtttttgagataagcttagggtaattaatcaagttgatatttat  12207500                                                                         --------->AHL20(2)                             <---------ARR11(3)                      --------->ATHB12                       <---------HSFB2a(2)   --------->YAB1         <---------YAB1     <---------YAB1                       <XXXXXXXXXXXXXXXXXXXXMIR861-3P               --------->ICU4    <---------GLK1(2)              >>>>>>>>>>GT-1 --------->ARR11(3)        ----------->GT1   <---------AHL20(2)     ----------->GT1--------->ARR11(3)      <---------YAB1        --------->YAB1    <---------YAB1 ----->ZAT6   --------->ARR11(3)          --------------->AGL15 <---------YAB1      --------->ICU4   cactaaattgataaatgatatagttcttgaagacatttttgttactatgagaagaagttgaaaattattcatgatttaaatttgacatgattcttgtttg  12207600                                                                                                 <---                                                                                                 ====                                                                                                 ----                                                                                                <----                                                                                                =====                                <-----------GT1                                                ------                              <---------YAB1                                                   <-----                            <--------HAHB4                                                     <-----                            -------->ATHB1                                           ----------------                            <---------ICU4                                           --------->ANAC55(2)                            --------->ATHB51              --------------->AGL15      <---------------                   --------->At4g35610       ----------->GT1    <XXXXXXXXXXXXXXXXXXXXMIR838   <------ZmHOX2a(1)                   <---------At4g35610       <---------ZAT6  --------->YAB1          <---------ANAC55(2)      <---------WOX13(1)   --------->ICU4 --------->DAG2  ===========================================    --------->ATHB12       <---------YAB1---------->DOF2  <---------------AGL15    <-----------GT1   <---------YAB1  <---------ZAT2   ---------->DOF2---------->DOF2          >>>>>>>>>TBF1     =======   tgtttttgattgaattaagagagctcagaattattaacaaaagaaaagtgttataaagaactaaaataagaagtagaagaagaaattacctgttcaggat  12207700                                                             <---------TOE2(3)                                                           <---------ICU4                                                           --------->YAB1                                                          <---------ATHB12                                                          <---------ATHB51                                                        --------->WOX13(1)                                                 <--------ATHB1                                                 <--------HAHB4                                                 --------->YAB1    --------->AtLEC2                             -------->HAHB4    --------->ANAC46           <---------ANAC55(2)     <---------------AGL15 ----TEIL                      <---------ANAC58  --------->ATHB51 ====================HOX2a_HOX2a                 --------->ATHB12 -->ZmHOX2a(2)         --------->MYB52(1)       <---------YAB1 --ZmHOX2a(2)       --------->ANAC58            --------->ICU4 ====================HOX2a_HOX2a                <---------ATHB51 --->ARR14(2)       --------->ANAC58          --------->YAB1 <---------YAB1 ----ARR14(2)       --------->ANAC46        --------->AHL20(2) ----ARR11(3)    ------>ZmHOX2a(2)    <-----------GT1  --------------->AGL15 ->AGL1       <------ZmHOX2a(1)<---------ANAC58 --------->AHL20(2) --AGL1   ---------->DOF2--------->ICU4   <----------DOF2 --------->ICU4 ======================================================================MADS_MADS     <---------LBD16 =======================HOX2a_HOX2a<---------YAB1<---------ICU4                  --------->GLK1(2)   ccatccatgtaacaaaggatcgaagcaacgattacttatgtttccttttaataattagcaattatggtagaaattttgctcaaattctagggaaccagag  12207800                                                                    ---------->DOF2                                                                --------->AHL20(1)                                  <---------YAB1                <---------AHL20(1)            <------                               --------->ARR14(2)              <---------------AGL15          ------>ZmHOX2a(1)                               --------->ICU4              --------------->AGL15           ----------                               <---------ARR14(2)    --------->ANAC58                  --------->ALFIN1                           <---------At4g35610       --------->ANAC58--------->DAG2---------->DOF2                     <---------TOE2(3)     <------ZmHOX2a(1)   --------------->AGL15--------->DAG2       ---------->DOF2<---------At4g35610 *TSS    --------->ZAT18----------->TBP >>>>>>>>>GATA-1 ----   agagagagagaaagagagagtttgaggtgagcaaatatgaatagaggagaagagcacggttcttaatatataaagcaaatatagataaagtgtgtccttt  12207900                                                                                        ----------->RAV1(1)                                                                                       --------->ANAC58              --------->YAB1                                                  <-----------GT1            <-----------TBP                                                <---------YAB1          --   <---------YAB1                                                    <---------AHL20(2)--------->ANAC58 ----DOF2 <---------AHL20(2)                         <---------MYB46(3)<---------AHL20(2)  ---------- >ID1    <---------YAB1 <------------CBF       --------->STY1(2)     --------->AHL20(2)--------->ANAC46 ----->AHL20(2) <---------YAB1 <-----------GT1 <---------STY1(2)  --------->AHL20(1) <-----------GT1   ttaatatgatttttatttataattcaaattgattttctatttgttttgtagctagttgttgttttacatatattaatatgatactattcacgacagaaaa  12208000                                     ---------->DOF2                                             <---                             <---------AHL20(2)                                                 -----                           <---------RVE1(1)                                                    -----                           <---------CCA1(1)                                                    <----                          --------->ARR11(3)                                                <-------- ------->MYB52(1)         <---------ARR11(3)                       <----------DOF2        <---------AtLEC2 ->GT1                    <---------GLK1(2)                ----------->GT1            <----------DOF2   aaaacgatactattcacatttaagtcgagatttttttgcaaaagtcttcagcaatataaactagtaatacttttgttgataactctctctttgtatggtg  12208100  <----------DOF2 ----GAMYB                                  --------->TOE2(3)                                    <--- ------>GT1                                --------->ANAC58        <---------AHL20(2)           ----- ---->MYB55(2)                             --------->ANAC58        --------->AHL20(2)           <---- -----MYB46(3)                             --------->ANAC46       --------->AHL20(2)       <---------ICU4 -AtMYB61      <---------ICU4       <----------ID1         <-----------GT1    ----------->GT1 <------   gttactttagaatttgaacattgcgatataaaacgaaaactacaaacgtaagtagtcattttttctcatttatttctcatttgttaattacaaaaattac  12208200                  >>>>>>>>>RAP2.2                --------->ARR11(3)        --------->AHL20(2)           <---------YAB1                --------->YAB1        <---------YAB1                   --------->AHL20(2)           <---------ARR11(3)       --------->AHL20(1)             --------->YAB1                  --------->GLK1(2)       --------->AHL20(2)            --------->ICU4                   --------->ARR11(3)      <---------ICU4          --------->AHL20(2)                   --------->AHL20(2)  --------->AHL20(2)          <---------AHL20(2)            --------->YAB1  <---------AHL20(2)       --------->TOE2(3)               <---------YAB1 ------MYB59    <---------ARR11(3) --------->YAB1          ----------->GT1                    <------ ---->ANAC55(2)--------->CCA1(1) --------->AHL20(2)        --------->ICU4                    -------- -----ANAC55(2)--------->RVE1(1)--------->YAB1           --------->YAB1              <<<<<<<<<WRKY18 -----GT1--------->YAB1  <-------TEIL<---------YAB1   --------->YAB1 --------->RVE1(1)   --------->AHL20(2)   ctatttaaatattataaatatctaaaatacattaaaataataataaaaatagacaatagtgatgataaaaaaaatctaaaatggctgtcaaaaaaataaa  12208300  Previous    Next  AGI:  At2g28510.1    Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF2.1 (DOF2.1) [Arabidopsis Thaliana] (GB:Q8LE43;GB:Q8VYM9;GB:Q9SK07); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G60200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21785.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 12206175    to: 12207842    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version