Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------AHL20(2)           --------->AHL20(2)      <---------MYB52(1)                                                           <-----------ARR10-     <-------GAMYB                                                         ----------->GT1          <    <-----------RAV1(1)                                                   <---------TOE2(3)         - ------>AHL20(1)                                                  <---------AHL20(2)           ------ -------AHL20(1)                                  <---------AHL20(2) --------->ICU4--------->ARR11(3) ------>ARR11(3)          <---------ZAT6      <---------ZAT6      <---------YAB1   <---------ARR11(3) -------ARR11(3)     --------->YAB1    <---------CCA1(1)        --------->YAB1    --------->CCA1(1) < ------AHL20(2)   <----------DOF2      <---------RVE1(1)   ------>ZmHOX2a(1)      --------->RVE1(1)--   tattttctgttgtttaaattcttttatagtgtaagtaagcgatattttgtgttaaattgtcctcgtttataattttgatgttaaatatctactcatgtac  12194800                                                   <---------ARR14(2)                                                <---------ANAC46  --------->ALFIN1                            --------->MYB52(1) <-------PIF5                                ----------->HVH21 ------->MYC2                             <-------MYC4 ------->PIF5                             ------->MYC4 <-------MYC4                             ------->MYC2 ------->MYC4                             <-------MYC2 ------->MYC3                             <-------MYC3 <-------MYC2                             ------->MYC3                                          <---- <-------MYC3                            ===========================bZIP_DOF                    ----- -------->TGA1a                          <---------ANAC55(2)                            --------->ARR11(3) ---------TGA1a                          ===========================bZIP_DOF            <---------ARR11(3) -------->O2                             --------->O2                 ---------->DOF2 --------->ANAC58 --->ZAT14                               <---------O2              >>>>>>>>>TBF1      --------->ANAC58 ---------O2       <---------YAB1        <---------TGA1a        >>>>>>>>>TBF1    --------->TOE1(2)<-- ---------->OsbHLH66                     --------->TGA1a ---------->DOF2   --------------->AtSPL8<---   acacgtgggtaatgacatattgtcatagacatatgaaatacacacgtgtaacggatagagaaagaagaagaagaaagttagtacctgcaagaacttaata  12194900                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              ------>NtERF2                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->ABI4(1)                                                                                           <---------ATERF1(1)                                                                                           ------>NtERF2                                                                                          --------->DEAR3(1)                                                                                          <---------ALFIN1                                                         <---------------AtSPL3          --------->DEAR3(2)                                                    <------ZmHOX2a(1)                    --------->MYB46(3)                                                --------->LBD16                          --------->DEAR4(2)                                              <-------TEIL                              --------->SPL7                                              ----------------->AGL1                    <---------ATERF1(1)      --------->At4g35610                   --------->ARR14(2)                         --------->ATERF1(1)      <---------ZAT2                        <---------ARR14(2)     <------NtERF2       <---------ALFIN1   <---------ANAC58                        --------->ATERF1(1)<---------DEAR3(1)      <---------ABI4(2)   <---------ANAC58                       ------>NtERF2 ---------->DOF2               ------>NtERF2 -----ICU4                                <---------ATERF1(1)<---------ZAT14          <---------SPL7 ---->YAB1 ---------->DOF2      <---------ZAT18<---------ANAC46   ------>NtERF2       --------->ZAT14 ---------RAV1(1)   <-----------HVH21     --------->LBD16<---------------AtSPL8       <---------ZAT14 ------TOE2(3)      --------->At5g28300 <---------LBD16<------ZmHOX2a(1)             --------->DEAR3(1)   atgttgctagctccaaagacacggtgagcgattgtgaacttcgccgggtccgtaggaggaaagtacggtgccaaaacacatttatcggcgcaccgccgcc  12195000                                                                      <---------DEAR3(1)                                                                     --------->ATERF1(1)                                                                     <---------LBD16  --------->GLK1(2)                                                  <------NtERF2  <---------ARR11(3)                                                 --------->At4g35610  --------->ARR14(3)                                                ------>NtERF2  <---------ARR14(3)                                     ------>NtERF2--------->ALFIN1  --------->ARR11(3)                                   <---------ANAC46 ----->LBD16                                           <---------RRTF1(2)<---------DEAR3(1) -->NtERF2                                         <-------GAMYB    <---------ATERF1(1) ---NtERF2                                        <---------MYB46(3)<---------RAP2.6(1) ---->DEAR3(1)                                    <-----------RAV1(1)<---------At4g35610 ------>RAV1(1)                                 <---------At4g35610 <---------RRTF1(1) ---->RRTF1(3)                                  <------NtERF2       <---------ORA47(2) ---->RRTF1(2)                                  --------->At4g35610 <---------RAP2.3(1) ---->RAP2.3(3)                                 <-------GAMYB       <---------ERF1 ---->RAP2.6(2)                                <---------ERF1      <---------RRTF1(3) ---->RAP2.3(2)                                ------>NtERF2       --------->ATERF1(2) --->RAP2.3(1)                                 <---------RAP2.3(1) <---------RAP2.6(2) --->ERF1                                      <---------MYB46(3)  <---------RAP2.3(2) --->ATERF1(1)                                <---------ANAC46     <---------DREB2C(2) --->RRTF1(1)                                 <---------DEAR3(1)   <---------RRTF1(2) -NtERF2                                      <---------RAP2.6(2)  <---------RAP2.3(3) -->ABI4(1)                                   --------->ATERF1(2)  <---------ATERF1(2) ---ATERF1(1)                                 <---------RAP2.3(2)  <---------DEAR3(1) ->ANAC46                                     <---------RAP2.3(3)  --------->ALFIN1 --ALFIN1                                     <---------ANAC58    <---------ABI4(1) --DEAR3(1)                                   <---------RRTF1(2)  <------NtERF2 ->RRTF1(3)                                   <---------ATERF1(2) --------->ATERF1(1) ->RAP2.3(3)                                  <---------ANAC58   <---------DEAR4(2) ->RAP2.6(2)                                 --------->ATERF1(1) <---------RAP2.3(1) ->ATERF1(2)                                 --------->RAP2.6(3) <---------ATERF1(1) --ATERF1(2)                               --------->ALFIN1     <---------DEAR3(1) ->DEAR3(1)                              <---------MYB46(3)     --------->ALFIN1 ->RAP2.3(2)                             <-----------RAV1(1)   <------ZmHOX2a(1) ->RRTF1(2)                            <-------GAMYB   <---------RAP2.3(2) >ERF1                                --------->MYB55(2) <------NtERF2<---------ANAC46 >RRTF1(1)--------->ANAC58            --------->MYB52(2)--------->LBD16 <------NtERF2 >RAP2.3(1)   --------->LBD16         <---------MYB46(3)<---------RAP2.3(1)                         < >ORA47(2)--------->ANAC46           --------->ALFIN1  <---------DEAR3(1)<---------AtMYB61        --- >RAP2.6(1)  --------->RAP2.6(2)     <---------AtMYB61 <---------RAP2.6(2)          --------->ALFIN1- >ATERF1(1)  --------->DEAR3(1)     <---------MYB52(1)<---------LBD16<---------ABI4(1)          <---- >DEAR4(2)--------->ANAC58      --------->MYB52(1)--------->MYB55(2)<---------DEAR4(2)       <------ZmHOX2a(1)   gcaaaatcttgcaagccgcacaagggcttagtacaaccggtggttgtggcggctgttgcggcgaaggaggcggcggaggtgaagaagtgggagaaggaga  12195100                                  <---------LBD16                                  <------NtERF2                                 <---------RAP2.3(1)                                 ------>NtERF2                                 <---------ATERF1(1)                                --------->O2                                <---------O2    --------->ALFIN1                                <---------RAP2.3(2)                                <---------DEAR3(1)                                              <----            <---------MYB46(3) --------->ATERF1(1)          ------>NtERF2                       -----         <---------MYB46(3)    <------NtERF2  <------MYB83 <---------ALFIN1                   <------        --------->ALFIN1      <---------ATERF1(1)         <---------ABI4(2)                   <------        <---------AtMYB61     ------>NtERF2 <---------MYB55(1) --------->TOE2(3) --------->YAB1 ----- ---------DOF5.7(2)          ----------->HVH21<------MYB46(1)  --------->At5g28300   <---------GLK1(2) ------>DOF5.7(2)            --------->ETT(2)--------->MYB111(1)<---------MYB52(1) <---------YAB1 -------->MYB52(1) <-----------HVH21 <------NtERF2      --------->PCF2           <---------AtLEC2 -----ZAT6 <---------AtMYB61 <---------DEAR3(1) <---------REM1(1)           <----------DOF2   -------   gttaacgggagtggtggtttctgtcaccttggcgacggcggaagcagtaggtgtagcgaccccaccgttaatctccatctttagcatgattctcaaaata  12195200       <----------DOF2      <---------ANAC58      <---------ANAC58                                                                         <-----    ------>NtERF2                                                                          <---------   <---------RAP2.3(3)                                                                ----------->GT1 -----AHL20(1)                    <-------GAMYB                                     --------->ZAT14 ---->ARR11(3)                   --------->MYB46(2)              ---------->DOF2    --------->ZAT18 ---ARR11(3)                     --------->MYB52(2)   <------------CBF              <---------ZAT14 ---AHL20(1)        <----------DOF2      --------->GLK1(2)     --------->MYB46(3)<---------ZAT6<----- ---->AHL20(1)     *TSS        <---------MYB52(1)  ------------>CBF              <---------ANAC46 -->AHL20(1)<---------AHL20(2)<-------GAMYB <----------DOF2   ------->TEIL  <---------ANAC46   <-----   ttttgggggcttatttgattttcttttgagtcagttagttgagtttcttttgaaacaattgatgaaccaaagtgtgttttgtagagtgaagtgatttatg  12195300                                                      ----------->HVH21                                                    <---------ANAC55(2)                                                    <---------ANAC55(1)                                                    --------->bZIP60(1)                                                    <---------O2                                                    <---------bZIP60(1)                                                    <---------ANAC46                                                    --------->ANAC55(2)                                                    <---------ANAC58                                                    <---------ANAC58      <---------ARR14(2)                       <---------ICU4                  <---------TGA2(1)     <------ZmHOX2a(1)                         --------->ATHB12                --------->bZIP60(1)  <------ZmHOX2a(1)                            --------->YAB1                  --------->TGA2(1) ----YAB1 <---------YAB1                      --------->ICU4  <---------AHL20(2) -DOF2<------------CBF                        <---------YAB1  --------->AHL20(2)              <------ ----TOE1(3)                   <-----------------------TaNAC69(2)              <---------bZIP60(1)  - ----TOE2(3)      <-----------TBP     ---------->DOF2 ----------->TGA1      <---------YAB1<---------YAB1   gtaaggaggattgtgagtgtatatatagagagagacatactaaagagaatgattacgtgacgatataaatattgagttatgatgtcattgtttttattcg  12195400                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                        --------->ATHB51                                                                                        <---------ICU4                                                                                    --------->AHL20(1)                                                                                    --------->AHL20(2)                                                                             <---------At4g35610                                                                             <------NtERF2                                                                            <---------DEAR3(2)                                                                            <---------RRTF1(1)                                                                            <<<<<<<<<AtERF-7                                                                            <---------RAP2.3(1)                                                                            <<<<<<<<<AtERF-5                                                                            <---------ERF1                                                                            ------>NtERF2                                                                            <<<<<<<<<AtERF-4                                                                            <<<<<<<<<AtERF-3                                                                            <<<<<<<<<AtERF-2                                                                            <<<<<<<<<AtERF-1                                                                            <---------ATERF1(1)                                                                           <---------DEAR3(1)                                                                           <---------ATERF1(2)                                                                           --------->ATERF1(2)                                                                           <---------RAP2.3(3)                                                                           <---------RAP2.6(2)                  --------->At5g28300                                      <---------RRTF1(3)            <----------DOF2                                                <---------RRTF1(2)         <---------ARR11(3)                                                <---------RAP2.3(2)        <---------CCA1(2)                                                 --------->RAP2.6(3)     <---------AHL20(2)                                                   <---------LBD16  <---------    <---------AHL20(2)                                                <----------DOF2  --------->ICU4    --------->AHL20(2)                       <---------DAG2      <---------WOX13(1) <---------AHL20(2) ---LBD16--------->ARR11(3)                  <----------DOF2   --------->ATHB12     <---------AHL20(1) -------->ICU4 <---------At5g28300   ------>ZmHOX2a(1)     <---------MYB46(3)--------->At4g35610   gaataattttatatctttacggtgactactactaaattcctcttgagcttttttgtttcaacggttgattgactttggcggctcaattaattatttccac  12195500                                             ------>ZmHOX2a(1)                                            --------->TOE2(3)                                            --------->TOE1(3)                        <---------YAB1    <---------YAB1                <---------DAG2           <-----------GT1    ---------->DOF2                <----------DOF2--------->GLK1(1)      <---------ZAT6                   <---------ALFIN1         --------->At4g35610   <---------GLK1(1)--------->DAG2             --------->SPL7 --GT1   <---------At4g35610<---------AHL20(2) ---------->DOF2            <---------MYB52(1)   attcgcacttaagctaaactttttttatatttgatttccaatttatccttaaagtagtcttaaaaaggagtaatccgttccccgttctcacacatctccc  12195600                   <---------HSFB2a(2)                   --------->HSFB2a(2)                <---------AHL20(2)               --------->AHL20(2)                                                                <---               <---------AHL20(2)                                  --------->AHL20(2)       <--------            <---------AHL20(2)                            <----------DOF2                  ----------           <---------AHL20(2)                           <---------YAB1---------->DOF2     <---------TOE1(2)           --------->AHL20(2)                          --------->ARR11(3)                 <---------TOE2(2)         --------->TOE2(3)                      ----------->GT1    <---------AHL20(2) --------->HSFB2a(2)       --------->ICU4                <---------------AtSPL8  --------->YAB1           <---------HSFB2a(2)   ttatatgcaaatattaattttatagaaaatatgtgtgaagaagtacaaacgcgttactatctttgatatttaaaaagaaactaaattgctcgaaggtatt  12195700  Previous    Next  AGI:  At2g28500.1    Description:  LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11). Identical to LOB domain-containing protein 11 (LBD11) [Arabidopsis Thaliana] (GB:Q9SK08); similar to LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G07900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21794.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 12193646    to: 12195219    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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