Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                            ---------                                                      --------->YAB1    --------->YAB1      ---------        <---------AHL20(2)                      ----------->GT1    --------->AHL20(2)       <--------     ------->TEIL                            <------ZmHOX2a(1)     --------->YAB1  <---------ARR14(2)  <---------ANAC55(2)                 <-----------HVH21  --------->YAB1<---------YAB1  ------>ZmHOX2a(1)  --------->ANAC55(2)             --------->DAG2<------MYB46(1)   <---------ATHB12 --------->ARR14(2) ---->AHL20(2)  <-----------GT1  ---------->DOF2<------MYB83  ------>ZmHOX2a(1)    <---------ARR11(3) -->TOE2(3)<---------YAB1<---------YAB1    <---------TOE2(2) --------->TOE2(3)    <---------CCA1(2)   aattatgtattttcttattcactaattcttcttgaaaaagtgtcataggatggtaacaataatcctcaataatatgataagaccatatcctctatatatt  12160800                                  --------->ZAT14                             <------ZmHOX2a(2)                   --------->AHL20(2) --------->ANAC58 --------->AHL20(1) --------->ANAC58 <---------AHL20(1) -AHL20(1)        <---------AHL20(2)                                                   <---------AHL20(2) >AHL20(2)     <---------AHL20(2) --------->ZAT18                         <-----------GT1  <--------- >AHL20(1)     --------->AHL20(2) <---------ZAT14             <------ZmHOX2a(1)  <---------TOE2(3) -ARR11(3)     --------->AHL20(1) <---------ZAT18    ------>NtERF2      <----------DOF2--------->AHL20(2)   agcagggaatttgaaaataaaatatttagggatcagtgtgctagggtatgcattcggcctaagaggagacacaactttacattatggaattatatactgt  12160900                             <--------ATHB1                             --------->YAB1                             -------->HAHB4                             <--------HAHB4                             <---------ICU4                             --------->ATHB51                            --------->ICU4                            <---------ATHB51                            <---------YAB1                                   <---------ZAT14                            --------->AHL20(2)                               --------->ZAT14                          --------->YAB1 ----------->GT1                     <---------ZAT18               ----------->HVH21      --------->TOE2(2)                  --------->ALFIN1             --------->CCA1(2)  --------->YAB1                           <---------------AtSPL8            <---------ARR11(3)  <---------AHL20(2)                <---------YAB1            --------->ARR11(1)  --------->AHL20(2)              --------->YAB1       ---------->DOF2- --GT1  ---------->DOF2 --------->AHL20(2)                   --------->YAB1  --------->ZAT18      ---   attgaacaaaaaaagatttgacacatattaataattaaaacataggtgaattgatatttagaagaatgatgctaagtggtgcacaaaaaaagaagaagag  12161000                                                                                        ----------->GT1                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                            <---------AHL20(2)                              --------->ARR14(2)                            --------->AHL20(2)                              <---------GLK1(2)                        --------->AHL20(2)                         -------->P                                    --------->ARR11(3)                        --------->WOX13(1)                             <---------ARR11(3)                       <---------WRKY38(1)                             --------->AHL20(1) ----------->GT1      --------->WRKY18(1)                        --------->ANAC55(2)  ---------->DOF2 -------->DAG2  <-----------GT1    <-----------GT1  <---------HSFB2a(2)<---------AHL20(1) ------->DOF2<----------DOF2  <---------ARR11(3)    --------->HSFB2a(2)<---------AHL20(2)   aaaaggtaactaaaacttttactagtcaaccagattttaactaaattgatttttctaaaacgaatatatgtaatatattaaaattttataaagataaata  12161100               ----------->GT1      --------->ZAT6                                                       <-------TEIL    ------>MYB46(1)                                            --------->YAB1    ------>MYB83               ---------->DOF2                <---------YAB1         ---------->ID1    --------->MYB52(1)     --------->YAB1           <---------YAB1      --------->CCA1(2)     <------  <---------MYB59    --------->YAB1  --------->MYB52(1)       <---------ATHB12 --------->ATHB12     <   caaacctaacacaaaaatggtgaacataatcagaatagcaaacgagagttgaatatgtttgcccatcatagatgatatacatgatttgtttttttttttc  12161200        ----------->GT1                                            <---------------AGL15       --------->DAG2                                              --------------->AGL15      ---------->DOF2                   --------->At4g35610    <---------CCA1(2)             -------- -----GT1                       <-------TEIL   --------------->AtSPL8                       <-------- ------------CBF   <------------CBF     <---------At4g35610  --------->YAB1         <---------ALFIN1   taaattgaaaaagtaagaacaaattgtagttatatacatgttagatgtctaggtactattcaaacatatctaatttaagctatctcccacctaagattcc  12161300        --------->GLK1(2)        --------->ARR14(2)        --------->ARR11(3)        <---------ARR11(3)                                                                -----------        <---------ARR14(2)    --------->HSFB2a(2)                                <-----------GT1       <------ZmHOX2a(1)      <---------HSFB2a(2)                        <---------MYB52(1)   ---------->DOF2 <---------WRKY18(1)     <---------AHL20(2)           <-------GAMYB    <-----------GT1 ->GLK1(2)------>ZmHOX2a(2)<---------ARR11(3)                 <----------DOF2 <---------AHL20(2) -GLK1(2)<------ZmHOX2a(2) --------->ARR11(3)  <---------AHL20(2)      ----------->GT1 <----------DOF2   gaatgaaaaggatctatagtttgacccaagttctcgaccatttgtttattttatatgtaaaacgctttagactcggttatttttttcttctttacaatct  12161400                        --------->MYB46(3)                       <---------YAB1                      ------>MYB46(1)                            <---------ATHB12                    --------->AtMYB61                  <---------AHL20(2)                 <-----------GT1                      <---------AHL20(2)  ----------->HVH21 <---------MYB59                   --------->AHL20(2) ->CBF<------------CBF------>MYB83                  --------->YAB1--------->YAB1   acatttgacattgctaatttaaccaaaccatcgtcttcaaaaccacatcgctaaaaataaatgacctataattctattcaagtttaacaaaaaaaaaaaa  12161500                            <---------TOE2(3)                            <---------TOE1(3)                          <---------YAB1                           ---------->DOF2        <-----------GT1<---------MYB52(1)                 <----------DOF2             --------->AHL20(2) <-------GAMYB              <---------ARR11(3)             --------->ICU4  --------->ZAT14<---------AHL20(2)              --------->GLK1(2)         --------->ANAC55(2)  <---------ZAT14--------->AHL20(2)              --------->ARR11(3)      <---------AHL20(2)     <---------At4g35610       ----------->GT1  --------->GLK1(2)        <---------DOF5.7(2)<---------AHL20(2)<---------At4g35610------->TEIL   aacaattctgttcaagtatcttttttggttaaagttctatttaagtatttattaacaaatttctgcagttgttttgatttaaatgaacatagtaaatcta  12161600             <---------ZAT14             --------->ZAT14             <---------ZAT18             --------->ZAT18                           --------->TGA1a       <-------MYC3                                    <---------TGA1a       ------->MYC3                                    <---------O2                            <-----      <---------ANAC46                                 --------->O2                            ------      <---------ANAC55(2)                         --------->PCF2  ----------->GT1              <-----      --------->ANAC55(2)                         <------ZmHOX2a(2)                           <------      --------->O2                               <---------ARR14(2)                  ================      <---------TGA1a                            --------->ARR14(2)                  ------>ZmHOX2a(2)      --------->TGA1a                      <---------GLK1(1)    --------->ICU4     <---------ARR11(3)      <---------O2  <---------YAB1----------->HVH21    ==============================================    ------------->DYT1          --------->At4g35610  ----------->RAV1(1)           --------->ARR11(3) --------->YAB1   --------->YAB1<---------At4g35610------>ZmHOX2a(2)     ----------->GT1 --------->ANAC55(2)   caaaaatcacgtgagttcacttataattgttttgggctgaaatggaattcggatcccacatgagtaatgagtaacttgaaaattcgatcttaggtgactt  12161700  Previous    Next  AGI:  At2g28405.1    Description:  LCR32 (Low-molecular-weight cysteine-rich 32). Identical to Putative low-molecular-weight cysteine-rich protein LCR32 precursor (LCR32) [Arabidopsis Thaliana] (GB:P82747); similar to LCR4 (Low-molecular-weight cysteine-rich 4) [Arabidopsis thaliana] (TAIR:AT3G25265.1); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851) Range:  from: 12160371    to: 12161169    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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