Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ------>ZmHOX2a(2)                                       =========================HOX2a_HOX2a                                      ==========================HOX2a_HOX2a                                      --------->GLK1(1)                                      <------ZmHOX2a(2)                                      <---------GLK1(1)                                     <-----------ARR10                                     --------->ARR11(3)                                     <---------AGP1                                     <---------ARR14(2)                                     --------->ARR14(2)                                     <---------ARR11(3)                                             -                                     --------->AGP1                                                 -                                    <---------CCA1(2)          <---------ALFIN1                  <---                           --------->ANAC58                   <---------ZAT2                  <------                           --------->ANAC46              ------>ZmHOX2a(1)           --------->ANAC58                           --------->ANAC58       ---------->DOF2         ------->TEIL       ------>ZmHOX2a(1) ---ZmHOX2a(2)           <---------ALFIN1     <----------DOF2--------->ANAC46        --------->ANAC58   tccctctaattttaaaaatagtatttcgcaccctactcagatctcttcctttcaaagtcctcccagcaccttcatgaaccgaaaacgaagccatcctccg  12155700                                          --------->LBD16                                          ------>NtERF2                                         <----                                          <------NtERF2                                       <------                                         --------->DEAR3(1)   <---------WRKY12                <------    --------->ANAC58          --------->ALFIN1               <---------MYB52(1)             <--------    --------->ANAC46        <---------ANAC46   <---------AHL20(2)        ------>ZmHOX2a(1) <---------    --------->ANAC58     --------->ANAC46--------->RAP2.6(2)<-----------HVH21      <---------HSFB2a(1) -------->ANAC58      <---------GLK1(1) --------->RAP2.3(1) --------->LBD16        --------->HSFB2a(1) -------->ANAC58  --------->ALFIN1      <---------LBD16    --------->ANAC46       <---------ARR11(3) ------MYB52(1) <---------ANAC46<---------CCA1(2)      <---------At4g35610        --------->ARR11(3) ---LBD16      <---------DEAR3(1)------->TEIL --------->AHL20(2)        --------->TOE2(3)------>ZmHOX2a(1)   gttcgcaagcaattcatgcggtggaactcgccgtgtaccttcgccgcataaaatttcatctccgtcaacttcttcctcattcgaaatcttcctctgtcgt  12155800                                                                                               ------                                                                                               ------                                                                 --------->LBD16         <---------LBD16                                           <---------MYB52(1)  <---------LBD16      <---------ARR14(2)                                    --------->DOF5.7(2)      <---------WRKY18(1)    --------->ARR14(2)                                   --------->TOE1(3)       <----------DOF2       <---------MYB52(1)                                   --------->TOE2(3)       <---------DAG2       --------->LBD16------    --------->TGA1a               --------->ANAC58       <---------At4g35610    --------->At5g28300<-    --------->O2                 <-------TEIL            --------->At4g35610<---------ALFIN1<-------GAMYB --NtERF2                    <---------------AtSPL3      --------->ZAT2    <---------MYB55(2)<------- ---ANAC46                   --------------->AtSPL3     ------->TEIL       --------->MYB46(3)<------- ---ETT(2)       --------->TOE2(3)--------->ANAC58   --------->ANAC46      <---------ABI4(2)<-------- ---HVH21      --------->GLK1(2) --------->SPL7      --------->ANAC58    --------->ARR14(2)<---------MYB46(3) --RAV1(1)    <---------GLK1(2)<---------MYB52(1)    --------->ANAC58    <---------ARR14(2)<---------DEAR3(2)   cgactctcgtctccaagaatcttagaccagtccggtacgttaaccggtagagaagacgcagctttaccggagtcagaaccaccgtgaatttgccggttag  12155900     ----------->HVH21                                                     ------>ZmHOX2a(2)    --------->SPL7                                                        <------ZmHOX2a(2) --------->LBD16                                                         <---------ARR11(3) --->MYB59                                                    <---------MYB52(1)          --------->ANAC58 ----->ARR10                                        --------->GLK1(2)    <---------ARR14(2) --->MYB52(2)                     --------->At4g35610     ------->TEIL   --------->ARR14(2) --------LBD16                    <---------At4g35610--------->At4g35610 --------->ARR11(3) --MYB52(1)               --------->ZAT18         <------ZmHOX2a(1)  ---------->DOF2      --------->ANAC58 -P--------->ARR14(2)  --------->MYB59            ================================HOX2a_HOX2a -MYB52(1)     <---------YAB1  ---------->DOF2    ===============================HOX2a_HOX2a   ttccggttcgaccggatgtgattgtaaggtcactaaagctgaaacttgaagaggaatctgaaccggtattgaaaagatcccattcgtctagctcgaaatc  12156000                 <---------MYB46(3)                 <------MYB46(1)                 <------MYB83                <---------AtMYB61               <--------P             --------->ALFIN1           --------->TGA1a           --------->O2           <---------bZIP60(2)           <---------TGA1a           <---------O2           --------->ANAC55(2)           =============MYC_MYB           <---------ANAC55(1)           <---------ANAC55(2)           <---------ANAC58           <---------ANAC46           <---------ANAC58          ----------->STF1         <---------TGA2(2)                    <---------ANAC46        ----------->HVH21                     <---------ANAC58        ----------->TGA1                      <---------ANAC58       <-----------HVH21                <---------ANAC58       --------->At5g28300              <---------ANAC58                <---------------AGL15       --------->ATERF1(1)              <---------ANAC46                --------------->AGL15       <------NtERF2                  <---------MYB46(3)               <------NtERF2      <---------MYB46(3)        --------->MYB52(1)                    ------>NtERF2     <---------DREB2C(2)       <---------ARR14(2)               <---------ANAC58     <---------DEAR3(1)        --------->ARR14(2)--------->REM1(2)  ---------->ID1     <---------ANAC46   <---------MYB46(3) <---------WRKY18(1)  <---------ANAC58                -----    <---------ABI4(1)  --------->ALFIN1<------NtERF2         <-------PIF5              >>>>>>>>>TBF1  --------->ALFIN1<-----------HVH21   ------>NtERF2          ------->PIF5           >>>>>>>>>TBF1  <-   ggaagtggcggtgacgtgttggtcagtggtgaagaaacggtggcttggccgtggatagtagcacttgctcgtcgccatttcaagaagaagaagaaatgaa  12156100                                                                           <---------WRKY38(1)                              --------->GLK1(2)                <------------CBF                             *TSS                            <---------AHL20(1)                             <---------GLK1(2)               --------->ARR11(3)                           <---------TOE1(3)                 --------->AHL20(1)                           <---------YAB1                 --------->AHL20(2)                           <---------TOE2(3)              <-----------TBP  <---------WRKY12                  ---------->DOF2                   <---------ANAC58      --------->WRKY18(1)      -- -->TEIL       --------->ANAC58          <----------DOF2<----------DOF2   ------------>CBF         -- ---------DOF2 --------->ANAC58  <----------DOF2    <---------ANAC58<---------REM1(1)             ---   actttgtttttggttttaagcaaagttttaagattcttttaggctttgggttttgcttctttatatattggtgaaggtcaatggatagacatagacttca  12156200                                               --------->GLK1(1)                                               <----------TaMYB80                                               <---------GLK1(1)                                               ---------->DOF2                                              --------->ARR14(2)                                            --------->LBD16                                           <---------ANAC55(2)                                           --------->ANAC55(2)                                   --------->ANAC46             <---------ANAC46                                   --------->ANAC58             <---------ANAC58      <---------ZAT6        <---------MYB52(1)<---------ARR14(2)<---------ANAC58          --------->ANAC58      ----------->GT1    <------------MYB.PH3(1)            <---------HSFC1(2)            --------->ANAC46   ------>ZmHOX2a(1)    <---------At5g28300<---------ANAC46 --------->HSFB2a(1)           --------->ANAC58 ----->GAMYB           <---------WRKY38(1)<---------LBD16   --------->HSFC1(2)          --------->MYB52(1) ------->AtMYB61     <-----------HVH21   --------->MYB52(1) <---------HSFB2a(1)    <-----------GT1<-- ------>MYB46(3)<----------DOF2    --------->ANAC58  --------------------->WRI1  <---------AHL20(2)   acctcctcgtgttaatttcttttggtcaccgttttctacgaaattacggaaatgcccttggaaatttcgtagaagtttgcgattttatccaaacgaaacg  12156300                                                                               ----------->GT1                                                                           <---------ZAT14                                                                       <-----------GT1                  --------->ANAC58                                 <---------ICU4                  --------->ANAC58                                 <--------HAHB4                  --------->ANAC46                                 --------->ATHB51                  --------->ANAC55(1)    <---------AHL20(1)        --------->AHL20(2)                <---------ALFIN1         --------->AHL20(2)        --------->YAB1               --------->ZAT14           <---------AHL20(2)        -------->ATHB1               <---------ZAT14    ----------->GT1                 --------->ICU4--------->At5g28300          --------->ZAT18      ---------->DOF2                    <---------ATHB12   <-----------HVH21    --------->MYB46(3)    <---------AHL20(2)  <---------ATHB51 -------YAB1   <---------REM1(2) --------->DAG2 <-----------GT1<---------AHL20(2)             -------   atgactgtcaagggctctacacggcaaccgattaaaaggttattttattttaacttgtggtttattcaattattaactacgctgtgaatatttgaatcat  12156400                         <---------YAB1                        --------->AHL20(1)       --------->At4g35610                        <---------AHL20(2)    <------ZmHOX2a(1)                        <---------AHL20(1)  <---------TOE1(2)                       --------->YAB1       <---------TOE2(2)                       --------->AHL20(2) --------->TOE1(2)                      <---------YAB1     <---------ANAC46                   --------->AHL20(2)    <---------ANAC58                                        <---                   <---------AHL20(2)    <---------ANAC58                                        ----                   --------->AHL20(1)--------->HSFB2a(1)                                  <---------AHL20(1)             --------->ANAC46        <---------HSFC1(2)                       <---------AtLEC2 <-----             --------->ANAC58        <---------HSFB2a(1)           --------->YAB1         <---------AHL20(2)  ---------->DOF2  <---------AHL20(1)--------->HSFC1(2)            <---------ICU4         --------->AHL20(2) -->YAB1     --------->ANAC58   <---------------------WRI1        <---------ATHB51        --------->AHL20(1)   gtgttaaagaagagaacgcaatttattatatttcttcgaaatttcgtaggaagatgaattggaaaacaataataactcttacatggatggaatttattaa  12156500                                                                                           <------ZmHOX2a(2)                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)        <---------AHL20(2)                                                              --------->LBD16      <---------RVE1(1)                                                               <---------LBD16     <---------ARR11(3)                                                              --------->MYB52(1)     <---------GLK1(2)                                                          --------->ANAC58     <---------ARR14(2)                                                         --------->ANAC58     --------->ARR14(2)               ----------->HVH21                     --------->ANAC58 ------MYB52(2)                     <----------DOF2                         --------->ANAC46 ----->MYB46(3)                  ------>ZmHOX2a(1)       ---------->DOF2    --------->ANAC58------>ZmHOX2a(2) ------GT1                 <---------MYB52(1)--------->YAB1        --------->YAB1 --------->YAB1   caaaccagattttttttttctcagacaccgttttcctcctttgacaatggtattagttataaagtattagtataatctaagcaagcataccggatccgat  12156600  Previous    Next  AGI:  At2g28400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21845.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) Range:  from: 12155381    to: 12156129    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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