Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->AHL20(2)                                                        <---------AHL20(2)                                                        --------->AHL20(1)                                                   <---------AHL20(1)                                                   --------->AHL20(2)                                                   <---------AHL20(2)                        <---------AHL20(1)     <---------AHL20(2)      <---------YAB1    <---------AHL20(2)     --------->AHL20(2)     <---------AHL20(1) <---------ARR11(3)    --------->AHL20(1)     <---------AHL20(2) --------->AHL20(1)    <---------AHL20(1)    <---------------AGL15     <---------ANAC58<---------AHL20(2)                                <----    --------------->AGL15     <---------ANAC58--------->AHL20(2)                                -----   <---------YAB1       --------->ARR11(3)--------->AHL20(1)                                   ------   --------->ICU4       --------->AHL20(2)--------->AHL20(2)                                   ------ -------MYB46(3)     --------->YAB1       <---------AHL20(1)                                   <----- ----MYB46(1)        --------->AHL20(2)   <---------AHL20(2)                    <----------DOF2<----- ----MYB83           <---------AHL20(2)  --------->AHL20(2)            <----------DOF2     --------->AHL20(2) -------->GT1     --------->YAB1<---------MYB52(1) --------->AHL20(1)  <---------DAG2  ----------->GT1 -----WOX13(1)   <---------AHL20(2)      <---------AHL20(2)         <-----------GT1---------->DOF2  < -->ATHB12       --------->AHL20(2)  --------->AHL20(2)<---------AHL20(2)      <---------ICU4 <------ --YAB1         --------->AHL20(2)   <---------AHL20(2)--------->AHL20(2)  <---------AHL20(2) -------   tggttattatttttggaaattaataatatatttcgttttttaattaaatttaattaattaaattagtatttgactttttaatctttaaagagataaatta  12101400                                                                                  <xxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <----------DOF2                                                   <---------------AtSPL3   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                               --------------->AtSPL8       - -----AHL20(2)                                                         <---------------AtSPL8       < ---->AHL20(2)                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --->AHL20(1)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --->AHL20(2) <---------AHL20(2)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----AHL20(1) --------->AHL20(1)                         ----------->GT1    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----AHL20(2) <---------AHL20(1)                        <---------TOE2(3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -----------GT1                          <---------AHL20(2)         <---------AHL20(2)          <---- ---AHL20(2)  --------->AHL20(2)         --------->AHL20(2)       --------->AHL20(2)  --------->AHL20(2) -->AHL20(2) --------->AHL20(2)      --------->AHL20(2) <---------TOE1(3)  ------->TEIL       <------   atttactctttaaaattttatttctaatggtatacccatgtaattacttacaaaaattaaggttacattttaaaatgtacttcccaaataatatagtagg  12101500          <---------YAB1        <---------ICU4     <---------AHL20(2)    --------->AHL20(2)    <---------AHL20(2)                                                                   --------->DAG2 xxsmallRNA(le3)                                                                    --------->HSFB2a(2) xsmallRNA(si3)                            --------->DAG2                           <---------HSFB2a(2) -------->AHL20(2)                        ---------->DOF2          ----------->RAV1(1)  ---------->DOF2 ---------AHL20(2) <----------DOF2  ---------->DOF2     --------->YAB1              --------->HSFC1(1) --ZmHOX2a(1)    ---------->ID1  --------->TOE1(3)   --------->WOX13(1)       <---------O2 ---TOE1(2)<---------AHL20(2)---------->DOF2----------->GT1     <-----------GT1     <---------HSFC1(1)   attttattaatttttatttgtctttaaacaataaagcttaaagcaaaagtgaaaccaattacaaatttacaacagttgcgatgtgtctagaaaagcgaaa  12101600                          --------->ANAC46         --------------->AGL15                                                                     --         <---------------AGL15                                                              ---------        ----------------->AGL2                     ----------->GT1                         <---------ATHB12        <-----------------AGL1                    <----------ID1                          ------>MYB46(1)        ----------------->AGL1                  --------->DAG2                            ------>MYB83        --------->ZAT6    --------->ANAC58     ---------->DOF2                           --------->WOX13(1)        ----------------->AG           --------->YAB1                                   --------->MYB46(3)        <-----------------AG          <---------ATHB12       ----------->GT1            --------->AtMYB61      <-----------GT1     --------->ANAC58 <-----------------AGL1                   --------->MYB46(3)   accgattttaaccctataaggccagaccaggccaaggcctatcatatcaaaaagggcaaaaacgagtgaatttggacaaaatcgaaaccaccaatcagaa  12101700                                                  <---------bZIP60(1)                                                  --------->bZIP60(1)                                                 <-----------STF1        <---------ICU4                                          ----------->GT1                --------->ATHB12                                        --------->DAG2                  <---------YAB1      <--------                                       --------->DAG2                   <---------ATHB12  <---------YAB1                                      ---------->DOF2              --------->ANAC55(2)   <----------DOF2                                   --------->ANAC46           --------->AHL20(2)     <---------CCA1(2)       <-------GAMYB               --------->ANAC58--------->TOE2(3)    --------->ICU4<---------ARR11(1)      <---------MYB46(3)           --------->ANAC58<-----------TGA1<---------ANAC55(2)--------->ARR11(3) ------->AHL20(2)             --------->YAB1    <-----------GT1   <-------TEIL    ------>ZmHOX2a(1) < >YAB1----------->GT1    ------------>CBF----------->GT1   --------->TOE2(3)   ---------->ID1       <   aatatatgtggttaaaactttgaacacatcaataaacacgaaaagggtaataacgtcatttccataaattcgtaatcattcgtcctcaaatctttattgt  12101800                                                                             ----------->TGA1                                                                           --------->YAB1                                                                           <---------ICU4                                                                          <---------YAB1                                                                        --------->YAB1            ---                                                           ----------->GT1--------->ICU4       <-----                                                   --------->LBD16     --------->ICU4  ============== ----CBF                                          <---------LBD16      <---------YAB1  <------ZmHOX2a(2) ----------DOF2        *TSS                      <---------LBD16 --------->DAG2       <---------ARR11(3) ---------DAG2   ------------>CBF          --------->AHL20(2)   ---------->DOF2       --------->ARR11(3)   cacttttacaaaaaatactcccaatttcagagaaacctgttgaaaaaaaattcagggaaaattggaaaaagtgatgatgatgacgagagatcaattcaaa  12101900                                              <---------At4g35610                                          <-----------TGA1    <---------GLK1(2)       ------>ZmHOX2a(1)              --------->TOE2(3)      <------------------------ANAC81       =============================HOX2a_HOX2a             <---------YAB1        <---------ANAC46 ------>TOE2(3)              ==============================HOX2a_HOX2a           ---------->ID1 ----CCA1(2)        <---------ICU4 <---------ALFIN1 ------>ZmHOX2a(1)   <---------LBD16 =============HOX2a_HOX2a    ------>ZmHOX2a(2)--------->At4g35610   <----------DOF2          <-------   tcttaagtcctccaaattttaaaaatttcgatctccactaccttcgtcatcttcctctacttctgattctcttttctgggtttgtcgtttaatgggttga  12102000                                                            <---------RVE1(1)               <--------                                                            <---------CCA1(1)      <---------LBD16              ----------->GT1                              <---------ARR11(3) <---------ARR11(3)           --------->MYB52(1)                <---------YAB1<---------ARR14(2) <---------GLK1(2)      --------->TOE2(3)                 <<<<<<<<<MYB2      --------->ARR11(3) --------->ARR11(3) -P  ----------->GT1              <----------DOF2  <---------ANAC46        --------->HSFB2a(2)   ttttgtatcgtcaaaacggagaaaacaagaagacttcttttggttttcttattgcgaagaagatatttctagggtttcgagattttctgggttttctggg  12102100                                                                  <-------TEIL                                                       --------->HSFC1(2)                                                       --------->HSFB2a(1)                                                       <---------HSFB2a(1)               <---------WOX13(1)                      <---------HSFC1(2)             --------->ATHB12                      --------->ANAC46          ---------->DOF2            <---------YAB1                         --------->ANAC58    --------->DAG2   <---------ANAC58       <---------ICU4<---------ANAC58      <---------TOE1(3)   <---------ANAC46       --------->ATHB12         --------->ANAC58   ---------->DOF2   <---------ANAC58      <---------YAB1 <---------ANAC58      <---------TOE1(2) -LBD16   <----------DOF2--------->ICU4 <---------ANAC46      <---------TOE2(3)   <----------DOF2   tttttgtgtgttctttgattggatttgattattgggcaatttccttggaattcaagaaacttctaaggttcttaaagtgtaaagctttgtgattttctct  12102200                                                                                 <---------ANAC46                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 <-------GAMYB                                                                                --------->MYB55(2)                                                                                <---------MYB46(3)                                                                                <------MYB46(1)                                                                                <------MYB83                                                                                --------->MYB52(2)                                                                               --------->MYB111(1)                                                                               <---------AtMYB61                                                                              <--------P                                                                            --------->HSFB2a(1)                                                                            <---------HSFC1(2)                                                                            --------->HSFC1(2)                                                                            <---------HSFB2a(1)  <---                <----------DOF2                                             <------MYB46(1)     <----             <------ZmHOX2a(1)         <----------DOF2                      <------MYB83    <--------          <---------HSFB2a(2)         <---------ANAC58              <XXXXXXXXXXXXXXXXXXXXMIR839 -----          --------->HSFB2a(2)         <---------ANAC58     <---------------------WRI1    <---------AHL20(2)   tattcatacattctaggactttggttttggagttgtaatggcttttgggtctgaaaatgagagcgagacgaagatggaaggttggttgtatataatacga  12102300  Previous    Next  AGI:  At2g28320.1    Description:  pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein. similar to pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G54800.2); similar to pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G54800.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAK21344.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68939.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21857.1); contains InterPro dom Range:  from: 12101823    to: 12106721    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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