Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->DAG2                    <---------ANAC58      ----------------->AGL1                       <---------ANAC58 -------->ARR11(3)                           <----------DOF2 ---------ARR11(3)                           <---------DAG2 ---------AHL20(1)                        ------>MYB83 -------->AHL20(1)                        ------>MYB46(1)              <---------ANAC58 -----GT1       ---------->DOF2      <-----------GT1<----------DOF2    <---------ANAC58   aatattttgcccaatagaaaaagtatgagaaattcagtttcaccttcctttttgcttttagttcaagtcaattgtttgtccatagaaaaccatacaatgt  12095600                                                            <---------YAB1                                                            --------->ICU4                                                           --------->TOE2(3)                                   <---------YAB1        <---------YAB1           <---------MYB46(3)      <---------TOE1(3)   <---------CCA1(2)                        -----      <---------MYB52(1)           <---------TOE2(3) --------->YAB1              <------ZmHOX2a(1) --    --------->ATHB12        <----------DOF2 --------->GLK1(2)                   ----------->GT1 -----  >>>>>>>>>>>>>>>>>LFY  <---------GLK1(2)<---------TOE2(3)--------->ATHB12      <----------ID1  -----   ctccctccattggctgtttcatttcagagtcttttttatggttaagaatttgctatcatatcattagtagaagtctcttatgaggaaaaacaaatattaa  12095700                                                           <---------AHL20(2)                                                         <---------YAB1                                                       <---------ICU4                                                       <---------AHL20(2)                                                       <--------HAHB4                                                       -------->ATHB1                                                       -------->HAHB4                                                       --------->YAB1                                                       --------->ATHB51                                                      <---------YAB1                                <---------ANAC58      <---------ATHB51                   <------MYB46(1)      <---------YAB1            <---------ANAC58      --------->ICU4                     <------MYB83    <---------ICU4              --------->ANAC55(2) <---------ICU4                       <---------ANAC46   <---------YAB1             <---------ANAC46      <--------HAHB4                       <---------ANAC58 --------->REM1(1)        <---------ANAC58         <---------YAB1                        <---------ANAC58 ---->ANAC58              <---------ANAC58       --------->YAB1           <------ZmHOX2a(1)<---------ZAT6 --------->RAV1(1)      ------->TEIL --------->ICU4--------->ICU4       --------->MYB59 --------->MYB46(2) ---->ANAC46            --------->ARR11(3)<---------AHL20(2)          --------->ICU4    --------->MYB111(2) ---->ANAC58           <---------CCA1(2)<---------ANAC55(2)--------->AHL20(2)           <---------AtMYB61   gcaacatcattatagtttttctcatgtatcttgtgcgtaattatgtaaatgtcataattattaaaacatgaaattaggaagaacagaagtttggtgttag  12095800          <---------YAB1         --------->AHL20(2)    <---------ATHB12    --------->MYB46(3)   ------>MYB83   -------->P   ------>MYB46(1)  --------->MYB55(1) --------->DEAR3(1)            <---------ARR11(3) <---------MYB46(2)            --------->ARR11(3) --------->MYB46(3)           --------->RVE1(1)    <---------AtLEC2 <---------MYB55(2)        --------->AHL20(2)  <----------DOF2           ------------>CBF --------->AtMYB61         --------->YAB1     <---------DAG2            --------->YAB1          ----- <---------MYB111(2)    --------->YAB1--------->AHL20(2)       --------->YAB1        <----------DOF2 <---------MYB111(1)   --------->AHL20(2)  <-----------GT1     <---------ICU4   ------>ZmHOX2a(1)   acaccaaccatttttatacaaacaaataataaaaatctcattatatcacctttgcatttcatcactcatcacattcacaatccttctctttttctcacat  12095900     --------->ARR11(3)                               *TSS     <---------ARR11(3)                    --------->CCA1(2)    <---------CCA1(2)                     <---------ARR11(3) --------->AHL20(1)                       --------->ARR11(3) <---------AHL20(1)                       <---------ARR14(2)  ----------->GT1                       < <---------ARR11(3)     --------->ATHB12  --------->ARR14(2)<------ZmHOX2a(1)--------->CCA1(2)  <---- ------->CBF<----------DOF2    <---------WOX13(1)  <------ZmHOX2a(1)         --------->At4g35610<----   caatatatatctctctttctctctcttcatttgatagatttgaagatttgagaggagagagaggaagaaaaaatgggagagatgaagagtatgcaaatgg  12096000                                                                                     <----------DOF2                                                                                  ----------------->AGL1                                                                          --------->YAB1      -------   <---------WOX13(1)                                                    <---------ATHB12   <-------- --------->ATHB12                                       ---------->DOF2 ------>MYB46(1)  ----------->GT1 ---------YAB1                        >>>>>>>>>>>>>>>>>LFY      --------->YAB1   <-----------------AG -----ANAC58                ------->TEIL             ----------->RAV1(1)------>MYB83<---------DAG2--- -----ANAC58           --------->At4g35610   <---------YAB1  <----------DOF2     <-----------------AGL1   gtgtgattggagcattgtttctatcagttgcatcttctgtctccattgtcatttgcaacaaagctttgatgaccaatcttggtttcccttttggtaatta  12096100                                          =====================================HOX2a_HOX2a                                          ------>ZmHOX2a(2)                                         <---------RVE1(1)                                         <------ZmHOX2a(2)                                        --------->ARR11(3)                                        <---------ARR11(3)                                        <---------ARR14(3)                                        --------->ARR14(2)                             <---------AHL20(2)                           <---------WOX13(1)                            <---------AHL20(2)                          ==============HOX2a_HOX2a                            --------->AHL20(2)                          <------ZmHOX2a(1)                            --------->AHL20(1)                         <---------YAB1                            <---------ARR11(3)                        <---------TOE1(2)                 <----------DOF2        --------->AGP1                <---------TOE2(3)     <--------    <----------DOF2         --------->ARR11(3)                        <---------TOE2(2)     <--------    <---------DAG2          <---------AHL20(1)  --------->YAB1      --------------------->WRI1 -->ICU4        <---------ANAC58        --------->ARR14(3)   --------->KAN4(2)    <----------DOF2 -ICU4          <---------ANAC58        <---------ARR14(2)  <---------KAN4(1)     <---------DAG2 ------------>AtSPL8      --------->GLK1(2)<----------DOF2  --------->KAN4(1)  ------>ZmHOX2a(2)   ctagtactttttttttttgctttgtgagaatatattttgtaagatctttatcaaaaacccgattattcgtcttaggattgatcgcttttttgctatggtt  12096200                                                       <-----------RAV1(1)                                                       <---------O2                                                <---------ALFIN1          ----------->RAV1(1)                  <---------ZAT18       ----------->RAV1(1)                   <---------ZAT18 -TOE1(3)--------->REM1(1)              --------->ARR11(3)  <---------ANAC46        <---------KAN4(2) -TOE2(3)--------->MYB46(3)       ----------->GT1 --------->ANAC46           <----------DOF2   ttgttacagcaacaacacttactagttggcatttgatggtaacatattgcacacttcatgtggcatataaactaaacttctttgagaataaaccaataga  12096300                                                                                                 ----                          ------>ZmHOX2a(1)       ------>ZmHOX2a(1)                              <---                    ---------->ID1       <---------MYB52(1)                                     <----                <----------DOF2    --------->GLK1(1)                                        ---------      <-----------RAV1(1)--------->TOE2(3)       --------->TOE2(3) <----------DOF2        -----------   catgagaactgttgttctctttggcctcctcaatggcatttccattggtctcctcaatctcagcctcggctttaattccatcggcttctatcaagtatat  12096400                                                                              ------>MYB83                                                                              ------>MYB46(1)                                <---------YAB1                              <---------MYB59                            --------->AHL20(2)                           >>>>>>>>>>WRKY26                            --------->YAB1                               >>>>>>>>>>WRKY38 ----->ARR11(3)         --------->ICU4                                   >>>>>>>>>>WRKY43 ------ARR11(3)    ----------->GT1   <-----------GT1                  <---------At4g35610 -----CCA1(2)      <---------ANAC55(2)                                --------->At4g35610         <-- >AHL20(2)         --------->ANAC55(2)          <---------YAB1 --------->MYB52(1)       --------->YAB1 >GT1     <----------DOF2   <---------AHL20(2) <---------TOE2(3)    <-----------RAV1(2)<---------YAB1   atcttcgacatacttttgatcatgtaacaattatatgattcaccaatttgatgtttgtccataactaatggcagatgaccaaacttgctatcataccatt  12096500  Previous    Next  AGI:  At2g28315.1    Description:  transporter-related. similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G06890.2); similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G06890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21859.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 12095954    to: 12097778    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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