Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------MYB52(2)                                    --------->ANAC58                               --------->ANAC58        ---------->ID1         <----------ID1                              --------->YAB1 ---------CCA1(1)              --------->ANAC58            <---------YAB1  <---------ICU4 ---------RVE1(1)            ---------->DOF2               <---------AHL20(2) ------->ARR11(3)       --------->At5g28300               --------->AHL20(2)            <---------AtLEC2 --------ARR11(3)      ----------->GT1 <-----------GT1    <---------AHL20(1)            <---------ANAC46 -------->GT1         --------->ZAT6--------->ANAC58      --------->AHL20(1)        --------->At4g35610 ---->DOF2           <---------At5g28300               --------->AHL20(2) <---------ATHB12   <-------TEIL ---AHL20(2)        <-----------GT1 ----------->GT1  --------->AHL20(2) --------->WOX13(1)   ------->TEIL   aggtatttttgtccctcaaaatttacagtaaaaaagccaagtaacaatttttcaaaaaaatataattctaagcccaatcatggagttgctgcatgtacat  12092100                                                                    --------->TOE2(3)                                                                    --------->YAB1                                                             --------->ZAT6                         <                                                         <----------DOF2<---------YAB1              <                                                        --------->TOE2(3)                           -                                                       ----------------->AGL1 <---------YAB1   ------   cagaacatggagtcatggaccatctatgggctcagtcccaaacttagcccatatgtttcctttacagtaatcttattcttcttattcaacacatatttct  12092200 <---------ICU4                                       --------------->AGL15 -------->HAHB4                                      --------->ANAC55(2) <--------ATHB1                                      <---------ANAC55(2) ---------YAB1                                  --------->ATHB12                            <-------- ---------ATHB12                              <---------WOX13(1)                  <---------AHL20(2) -------->ICU4                         <---------TOE2(3)            --------->ANAC58        --------- --->TOE2(3) <----------DOF2 ---------->DOF2<---------WRKY18(1)     --------->ANAC58       <---------CCA1(2)   taatgattctatttcctttgttgtcacaaatgaaagtagttaagtttgactgattacgagatttagaaacaagaaaaaccagttttaattttcaaatctt  12092300                                                                                                  ---                                                                                  <---------CCA1(2)                                   --------->AHL20(2)                    -------->HAHB4          <---                             <---------ANAC46                            --------->YAB1          ----                   <---------AHL20(2)                                <---------------AGL15   --------                   --------->AHL20(2)   ---------->DOF2             ----------------->AGL3   <-------       ---------->DOF2     <---------ANAC46               ------->TEIL  <---------YAB1   <---------YAB1 -ARR14(2)        --------->ICU4   --------->YAB1  --------->MYB46(3)------>ZmHOX2a(1)<----------DOF2 >ARR11(3)   ----------->GT1 ----------->GT1    <------ZmHOX2a(1)   <-----------------AGL3  <--------   gttggctccaaaagaatgtaataaatgagttgtgtaataaaaaaaagacaggaacaaatgtatgtaatgtcctaataatagagcttatcttttgattaat  12092400      --------->DAG2     ---------->DOF2                                                   ------>MYB83 --------->YAB1                                                        ------>MYB46(1) ------>WOX13(1)                                       --------->ARR14(2) ------AHL20(2)             --------->AHL20(2)         <---------ARR14(2)          <----------DOF2 ----->AHL20(2)             <---------AHL20(2)        *TSS             <---------CCA1(2) ->AHL20(2)                --------->AHL20(2)     --------->ANAC46   <---------MYB111(1)        <---- --AHL20(2)           <---------TOE2(3)           --------->ANAC58   --------->AtMYB61         <xxxxx -WOX13(1)       <----------DOF2                  --------->ANAC58  --------->ANAC46        <--------   taatcaaaaaagtttgggccttttaagaatttaaaaaacctccaaaaattcgacgcaaataggcctctccaccaaatctctctctctttctctctgtcac  12092500                                                                                    =================HOX2a_HOX2a                                                                                   <------ZmHOX2a(2)                                                                                   ==================HOX2a_HOX2a                                                                                  <---------ARR11(3)                                                                                  <---------ARR11(1)                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                                  <-----------ARR10                                                                                  <---------AGP1                                                                                 <---------ARR14(1)                                                                                 <---------CCA1(2)                                <-----------ARR10                           <---------ARR14(2)                                <---------ARR14(2)                         <------NtERF2                                --------->GLK1(2)                          --------->ATERF1(1)                          ===================HOX2a_HOX2a                  ------>NtERF2                          ------>ZmHOX2a(2)                               <-----------HVH21                         ====================HOX2a_HOX2a                  <---------ATERF1(1)                         <------ZmHOX2a(2)                               <---------ANAC58              <---------At4g35610                                     --------->DEAR3(1)<---------ATHB12      --------->ZAT6    <---------ARR14(2)                 <---------ZAT2<---------ANAC58--------->YAB1      <-----------GT1   --------->ARR14(2)   --------->ZAT18 <----------DOF2--------->ARR14(2) <----------DOF2  ----------->HVH21          --------->At4g35610     <---------LBD16------>ZmHOX2a(2) -----ALFIN1  --------->At4g35610     ------>ZmHOX2a(1)    <---------At4g35610  --------->LBD16 xxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->ARR14(2)         --------->ZAT2--------->DEAR3(1) ---HVH21     --------->ZAT14  <---------GLK1(2)           --------->At4g35610<---------LBD16 ------>ZmHOX2a(1)   actctttatcactctctgctctcacagatcggagaatctcctctgagagctctaatctctcagctttcttcaccggcgtctccggatctaataatcctgt  12092600                                 --------->AHL20(2)                               <---------ARR11(3)                               --------->ARR11(3)                         <-----------GT1                  --------->At4g35610                      <-                     <---------AHL20(2)         <---------CCA1(2)                               -----                    <---------YAB1<---------AHL20(2)<----------DOF2         <---------REM1(1)   ----- <---------ANAC46  --------->AHL20(2) <-----------GT1     <---------At4g35610              <---------At4g35610   aaggcctgtaagtaatctcatttttattttcaagatttatttgcgatttcatctcttttatgctgaatttgattttcgatgtagccttgttttagctatc  12092700                                                                   <---------ZAT14    <---------YAB1                                                 --------->ZAT14                <--  <-----------GT1                    --------->ZAT14<---------ANAC58                              <-- --------ICU4               --------->ARR11(3)      <---------ANAC58                       <--------- ---->YAB1                 <---------CCA1(2)        <---------ANAC46                    <-----------GT1 ---->ZAT6    <---------YAB1<---------ARR11(3)<---------YAB1 <---------At4g35610     <---------ICU4 -   agtattacaattagttatcactgtgatatatatcttctctgaagtattatgtttgcgttttgaagctactgcagaaaaaagattgaatttttacaatttg  12092800                                                                 ----------->GT1                                                                <---------TOE2(2)                                                               <-----------RAV1(2)        -----------                                                              --------->LBD16        <---------WOX13(1)                                 <---------CCA1(1)           --------->DEAR3(1)--------->MYB52(1) -------ANAC58                  <---------ARR11(3)          --------->ANAC46 ------>ZmHOX2a(1) -------ANAC58                  --------->ARR11(3)         ------->TEIL     --------->TOE1(3) ------AGL15  --------->WRKY38(1)<---------RVE1(1)       --------->ZAT14    --------->TOE2(3) ---------->HVH21  <---------ZAT14                       <---------ZAT14   ----------------->AGL1   gggtgactcaattttgttgactagagtgtttggagatatttctaactaaatgggaacaatgcaccgcaggtataatttccttaactgatagattgtaata  12092900                                                                                                 <---                                                                                                <----                                                       <---------AtMYB61                      <------                                             ----------->ARR10                                -------                                             --------->MYB52(2) <---------HSFB2a(2)          --------                                           <---------MYB52(1)   --------->HSFB2a(2)     ----------->GT1   ---------->DOF2        <---------YAB1   <--------P  --------->ALFIN1      --------->YAB1  <------- >GT1           <-----------GT1          <---------MYB46(3)     ------>ZmHOX2a(1)      <---------TOE2(3)   caaaaaaaagagttttttttccaatatgaagattactacttagtggttagttttgcagtggtgctcctcgaagaacgaatgaaaatgcaaaggttattat  12093000  Previous    Next  AGI:  At2g28310.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08040.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08040.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21860.1); contains InterPro domain Protein of unknown function DUF707 (InterPro:IPR007877) Range:  from: 12092454    to: 12095137    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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