Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                  ---                                                                     --------->AHL20(1)           ---                                                                    --------->YAB1              -----                                                                   <---------AHL20(2)           -----                                                               --------->AHL20(2)               <----                                                             --------->TOE2(3)        ----------->HVH21                                                             <----------DOF2        <---------ANAC55(2)  --------->ANAC58                   <---------ANAC58 <---------YAB1--------->AHL20(2)----------->TGA1  --------->ANAC58                   <---------ANAC58--------->AHL20(2)             --------->ANAC55(2) -->DOF2                           <-----------HVH21 <---------AHL20(2)       <------ZmHOX2a(1) <----   agaaacgaaaacatgttttttcaacaagagtcaaacatgtcgtctccatcggcattaaaattactttaaataatattagaggaaaaacgtgacgactaag  12036700 <<<<<<<<<<ABI5 <---------ANAC58 <---------ANAC58 <---------ANAC46         ------->TEIL --------TGA2(2)        <---------ZAT18 -------->HVH21         --------->ZAT18 -------->TGA1       ---------->DOF2                                                                < ---->At4g35610     ------>ZmHOX2a(1)               <---------AHL20(2)                              - ---->ZAT2 <-----------ARR10   <---------YAB1      --------->AHL20(1)                            ---- -----ZAT2<---------CCA1(2)  --------->YAB1        <---------AHL20(1)                          ------ -----At4g35610   --------->YAB1                  <---------AHL20(2)             --------->AtMYB61 <-   ctgacgtataacatatctaatcctaatgcacttataattcatcttctactatatatatttcaattgcatccaagttgcattcaccaaaacatttatctcc  12036800   <---------ALFIN1 ---------ICU4                                                         ------->MYC3               <-- -------->YAB1                                          --------->ARR11(3)           --------->WOX13(1) ----->WOX13(1)                                         <---------ARR11(3)   --------->AHL20(2)<----- ------>CBF  <----------DOF2                    ------>ZmHOX2a(1)      <-------MYC3------------>CBF --------ATHB12                   ------>ZmHOX2a(1)    <---------CCA1(2) ----------->GT1       <-----   aatcatcacctctctctttctctctctctcgctctccttctctcgctctccttctctatatctctctcaaacacatggataaaatatcaatccgatgctt  12036900                                                  ----------->HVH21                                                 --------->At4g35610                                                 <---------At4g35610                                              --------->ZAT18                                              --------->ZAT14                                   <---------ANAC55(1)                           <---------ALFIN1   <---------ZAT14                          --------->MYB46(3) --------->ALFIN1                      <-----------TGA1     <---------ANAC46                      <-----------HVH21    <---------ANAC58                --------->At4g35610                    <-------TEIL   <---------ANAC46                        <---------At4g35610                  <---------GLK1(2)--------->ANAC55(2)                    --------->ANAC58    --------------------->WRI1     <---------ANAC58                   <------MYB46(1)    ------>ZmHOX2a(2) -------ARR11(3) --------->ZAT2    <---------ANAC55(2)  <---------GLK1(2) --------->ANAC58     <----- -----DOF2       --------->At4g35610       <---------ANAC58          --------->MYB59   --------->ARR11(3) ----DAG2        <---------ZAT2    <---------ANAC58----------->RAV1(1)<------MYB83     <---------ARR11(3)   tatcttcttagttctcaccagcttcgtcaccactgtttcgtgtttgagtgcagcgacagattatagagaagttggtaagctacacaagtgatcttggttc  12037000                                  <---------AHL20(2)                <---------MYB46(3)                       <---------ANAC58                            <---------WOX13(1)           -----                       <---------ANAC58                         <---------YAB1                  -----                <---------ANAC55(2)<---------AHL20(2)       <---------AHL20(2)          <------ZmHOX2a(1) --TEIL       --------->AHL20(2)  --------->AHL20(2)        --------->AHL20(2)------->TEIL      -----   attttgttcttacaaattacatatggcttaacaaaatttttttttgcattttgaaaactaaattatatgatggatggatgaatatgtagaggatgaacac  12037100                                                                              ----------->GT1    --------->ZAT2                                                            <----------ID1    --------->At4g35610                                                     --------->DAG2    <---------ZAT2                            --------->ANAC58          --------->LBD16    <---------At4g35610           ----------------->AGL1              <---------LBD16 ---->ANAC58                     <------NtERF2--------->ANAC58    <---------------AtSPL3            < ---->ANAC46                     --------->At4g35610  <---------LBD16--------->ALFIN1               - ---->ANAC58            --------->MYB52(1)  ---------->DOF2 ----------->GT1---------->DOF2 ------->GAMYB   gaattcagctacgaatggaaccaagagaacgggccagcgaaatggggaaagctaagaccggaatggaaaatgtgcggaaaaggagaaatgcaatcgccta  12037200                                                                         <---------ALFIN1                                                                      --------->bZIP60(1)                                                                      <---------bZIP60(1)            ---------->DOF2                                           --------->ANAC46  ------>ZmHOX2a(2)                                                   --------->ANAC58 ---------ARR11(3)                      ---------->DOF2               --------->ANAC58             <- -------->ARR11(3)          <-----------GT1                         <-----------GT1              ----   ttgatcttatgaacaaaagagttagacttgttactcatcttaaaaagcttactagacactacaaaccttgtaacgccactctcaaaaatagaggccatga  12037300                        <---------YAB1            <---------ICU4                                                                    >>>>>>>            --------->YAB1                                                                    >>>>>>>            -------->ATHB1                                                             --------->ZAT2            <--------HAHB4                                                             --------->At4g35610            --------->ATHB51                                <-----------GT1            <------NtERF2           --------->ICU4                         <-------TEIL                         <---------ZAT2           <---------ATHB12                    ----------->GT1                       <---------RAP2.6(2)           <---------ATHB51                   <---------TOE1(3)                 =================RAV         --------->WOX13(1)                   <---------------AtSPL8            <-----------RAV1(1) --------YAB1   <-----------GT1               <---------TOE2(3)    <----------DOF2   <-----------RAV1(2) ----->CCA1(2) <-----------GT1            --------->YAB1 <---------ICU4<-----------GT1 <---------At4g35610   tatgatggtatcaattattacccattctcatacatttctctcatttataaggttcaaaatttttacatactttatactaattttgtggcagctgaaattt  12037400                          <---------WRKY38(1)                          <---------WRKY12                        --------->At5g28300              --------->ATHB12                        <-----------HVH21               <-------TEIL                     <---------At5g28300               <----------DOF2               <---------YAB1-- >>SARD1<-----------HVH21--------->WRKY18(1)         <---------At4g35610           <---------------AGL15 >>CBP60g <-----------RAV1(2)                        --------->At4g35610           --------------->AGL15   ggagaagaagggtcagggagtattacggtcaatggaactgagtataaactcttacagcttcattggcattctccctctgaacatactatgaatggaagaa  12037500                                                                                              <XXXXXX                                                                                         <---------AHL20(1)                                                                                         --------->AHL20(2)                                                                                         --------->AHL20(1)                                                                                         <---------AHL20(2)                                           <---------AHL20(2)                       <-------TEIL  <--                                   --------->ICU4                        --------->DAG2 --------->AHL20(2)    ----------->RAV1(1)            ----------->GT1    <-----------GT1  ---------->DOF2--------->TOE2(3) ------->ALFIN1            <-------TEIL   --------->YAB1    <----------DOF2        --------->CCA1(2)   ggtgtgcaacattctataacataagtatatacatgaaatgtttataaaaatttgatatactacttttatcaacaaaagggagtagatacattaaattgat  12037600  Previous    Next  AGI:  At2g28210.1    Description:  carbonic anhydrase family protein. similar to carbonic anhydrase family protein [Arabidopsis thaliana] (TAIR:AT1G08080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21870.1); contains InterPro domain Carbonic anhydrase, eukaryotic; (InterPro:IPR001148) Range:  from: 12037074    to: 12039497    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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