Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------YAB1              <---------TOE2(3)                                            <---------YAB1         ---            <---------ICU4                                              <---------YAB1            ---            -------->HAHB4                                            <---------MYB46(3)          <-- ------GT1 --------->ICU4                <---------WOX13(1)       <---------YAB1                 ---- --->YAB1  <---------ATHB51           <---------YAB1          <---------AHL20(2)          --------->HSFB2a(2) >YAB1 <---------MYB52(1) --------->ATHB12      --------->ANAC46 <---------AHL20(1)       <---------HSFB2a(2)   caattctctgttaattatggaatatgaatgattcaagagtttgattaatcacaccaattgatattaatatgtttgttattagaaagtatgtactagaaga  12030800                                                                                       --------->CCA1(2)                                                                             <---------GLK1(2)                                                                             --------->ARR11(3)                               <-----------TGA1              <------ZmHOX2a(2)        <---------ARR11(3)                              --------->ANAC58               --------->CCA1(2)        --------->ARR14(2)                   <---------AHL20(2)                       --------->AGP1   <---------ARR14(2)                --------->YAB1--------->ANAC58              <---------AGP1 ----------->ARR10               <---------------AGL15                        --------->ARR11(3)        --------->ARR11(3) ------>ZAT2 --------->YAB1   --------->ANAC46    --------->HSFB2a(2)    <------ZmHOX2a(2)      ----- ------>At4g35610  --------->AHL20(2)             <---------HSFB2a(2)  <---------GLK1(1)  ----------- -------At4g35610 --------->AHL20(2)       --------->WRKY38(1)------>ZmHOX2a(2)       <---------ARR14(2) ----->GLK1(2) --------------->AGL15       --------->WRKY12 <---------ARR11(3)        --------->ARR11(1)   agctgtctaatacaatactaataaatgaaaaaacgtcatgaagggttgacttctggtatatagatctaggtagagatcagattttgaagatatggattaa  12030900                                                                           <---------AHL20(2)                                               <-----------HVH21       --------->YAB1                                            <---------AtLEC2   --------->ATHB12            --------->AHL20(2)                                          <---------AHL20(2)   <---------ICU4        <---------WOX13(1)          ------->GAMYB               --------->AHL20(2)      <---------YAB1       --------->ATHB12       ----------->RAV1(1)            <---------AHL20(2)    --------->YAB1--------->AHL20(2)    --------->CCA1(2)                <---------AHL20(2)<---------AHL20(2) <---------AHL20(2) ----->DOF2                   ----------->GT1 --------->ANAC46--------->ICU4      <---------YAB1 <--- >GT1<-------TEIL        ---------->DOF2  <-----------GT1 <-----------GT1<---------YAB1    <---------AHL20(2)   aagtagatacaacagaacagaaactagaaaagaagaaaaattatttacatgtcatatttttttcatcattgaattataaatttgttgattgattttattg  12031000                                                                                                -----                                                                                           <---------TOE2(3)                                                                                          <---------ICU4                                                                                         --------->ICU4                                                                                       --------->YAB1                                                                                     --------->AHL20(2)                                <---------At4g35610                                  <---------AHL20(2)                                <---------ANAC55(2)                                  --------->AHL20(1)                                --------->ANAC55(2)  ----------->GT1                --------->YAB1                               --------->MYB59      --------->DEAR3(2)             <---------YAB1                               >>>>>>>GRF7          --------->MYB46(3)   --------->At4g35610   ------                              <-----------RAV1(2)  ------->TEIL<---------YAB1     --------->TOE2(3)--                <---------ARR14(2)               --------->ZAT14         <---------At4g35610---------                --------->ARR14(2)               --------->ZAT18      <---------MYB52(1)<---------AHL20(2) ------YAB1 <------NtERF2   <-----------HVH21    <---------ZAT14    <---------MYB46(3)<---------YAB1   ttatggaatttggcagagaaaacgcagaagtgtcaggtaatgggtatagagtgaaccgtcaaaatgttattggttagctaaaaacattataataatgtaa  12031100                                                      ------>MYB46(1)                                                      ------>MYB83                                                    <---------MYB111(1)                                                    --------->MYB46(3)                                                    <---------MYB55(2)                                                    --------->AtMYB61                                                    <---------MYB111(2)                            --                                                    <---------MYB46(2)                            ---                                                 ------->GAMYB                                -------                             <---------ZAT14     --------->AtMYB61                          ---------                             --------->ZAT18    --------->MYB46(3)                          ---------    ------>ZmHOX2a(2)     ----------->GT1       <---------MYB55(2)                          <--------  <---------ARR14(2) <---------ANAC46          -------->P                                 --------->AHL20(2) ---->DAG2        <----------DOF2             ------->GAMYB                               ----------- ---->DOF2     --------->ARR11(3)            --------->MYB46(3)                          <---------AHL20(1) ------->ALFIN1<---------ARR11(3)   ---------->DOF2--------->ANAC46    <----------DOF2   --------->AHL20(1) -->GT1  ----------->GT1  <---------ANAC46 <-----------GT1   <-----------GT1            --------->AHL20(2)   agtggatcgatgtgtaaaatcttttgtggagtaaactaaaaagattaacaaccaccaaacttataacctctctctttttttttccgataaatatatatat  12031200        --------->MYB46(3)                                               --------->ANAC46   --------->PCF2                                                   --------->ANAC58  --------->At4g35610                                               --------->ANAC46 ------->At4g35610                                                  --------->ANAC58 ------>ANAC46                                                   <---------ZAT18 ---->TBP--------->AtMYB61                                       --------->ZAT14 >AHL20(2)          --------->ZAT14                              --------->ZAT18 -->TBP------>NtERF2<---------ZAT14                              <---------ZAT14          <---------ARR11(3) -AHL20(2)   <xxxxxxxxxxxxxxxxsmallRNA(i)                     --------->MYB52(2)          --------->ARR11(3) >TBP <---------ALFIN1    *TSS                              <---------MYB52(1)        ---------->DOF2   aagcagccccaccatcgtcttcttcactgcctctcttctctcttctcttctgtctctctcttgttagttcactccacataataaacaccaaagatttcat  12031300                                                                                                  <--                                                                                                  ---                                                                                                -----                                                                                             --------                                                                                            <--------                                                                                     <---------YAB1--                                                                                   --------------->AGL15                                   --------->MYB52(2)                             <-----------------AG                               <---------ANAC58                                   <-----------------AGL1                       =============================================================================MADS_MADS                      <---------ANAC58                                            ----------------->AG                      <---------ANAC58               --------------->AGL15        ----------------->AGL2                      <---------ANAC46               ===============================================MADS_MADS                  <---------HSFC1(2)                <---------ANAC58              <-----------------AGL3                  --------->HSFC1(2)       --------->ATHB12                       ----------------->AGL3                  <---------HSFB2a(1)   <---------ANAC58                          <-----------------AGL2                  --------->HSFB2a(1)   <---------ANAC58          <---------AtMYB61<---------------AGL15         --------->ATHB51      <---------ANAC58     <---------ANAC58            <-----------GT1<-----         <---------ICU4--------------->AGL15        <---------ANAC46      <----------DOF2   ---------   tctcttctccataatttcgaagtttcttgaattgggtttgtttcttgatttgtttcttgaattgggttttggtcttcttttcttactatatttggatatg  12031400                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                             <------NtERF2                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <--------                                                                                            <--------                                                                                           <---------bZIP60(1)                                                                                           <---------RAP2.3(2)                                                                                           <---------RAP2.3(3)                                                                                           <---------O2        --------->ICU4                                              --------->ARR11(3)     --------->ATERF1(2)     --------->WRKY18(1)                  ---------->DOF2           <---------ARR14(2)     <---------ANAC46  <---------MYB46(3)                    <---------YAB1          ---------->DOF2            <---------RRTF1(2) -------YAB1                   --------->ANAC58              ----------->RAV1(1)           <---------RRTF1(3) ------>ICU4                   --------->RAP2.6(2)          <----------ID1                 <---------RAP2.6(2) ---->YAB1                <---------At4g35610       --------->TOE1(2) ------>ZmHOX2a(2)    <---------DEAR3(1) ->CCA1(2)        <------MYB83 --------->ANAC58     --------->TOE2(2)<------ZmHOX2a(2)     <---------ATERF1(2) -ARR14(2)        <------MYB46(1)     --------->YAB1<---------SPL7  <---------ARR11(3)    --------->ATERF1(1) ------->ATHB12 <--------P--------->At4g35610<---------------------WRI1                 ----------->TGA1 ----YAB1       --------->ALFIN1     <---------ATHB12 --------->SPL7--------->ARR14(2)  ----------->HVH21 >ARR14(2)   <---------TOE2(3) --------->ANAC46   --------------->AtSPL3           --------->MYB52(2)   atgatgggtcaagatgaggttgggagtgatcagacgcaaatcataaaagggaaacgtacgaagcgacaaagatcgtcttcgacgtttgtggtgacggcgg  12031500  <---------ZAT14 ----------->RAV1(1) -----NtERF2 --->NtERF2 -------->RAV1(1) ----->DEAR3(1) ------->HVH21 ---->ATERF1(1) ---->RAP2.3(1) --NtERF2 ---->RRTF1(1) ----RRTF1(1) ----ORA47(2) ----ATERF1(1) >NtERF2 ----RAP2.6(1) ----DEAR4(2)                                                                            <---------MYB52(1) ----RAP2.3(1)                                                                          --------->LBD16 ----ERF1                      --------->ALFIN1                                         <---------At4g35610 ---RAP2.3(3)                <---------DEAR3(2)                                       <---------LBD16 ---RRTF1(3)                --------->MYB55(2)                                   <---------ANAC58 ---RAP2.3(2)               <---------DEAR3(1)                                   <---------ANAC58 ---DEAR3(1)                <---------MYB46(3)                               <-------GAMYB----------- -->DEAR3(1)                <---------ATERF1(2)                             <---------MYB46(3) ---ANAC46                  --------->ATERF1(2)                            <---------DEAR3(1) ->ATERF1(1)               <---------ORA47(1)                             <------NtERF2 --------->At4g35610 --ABI4(1)                 --------->SPL7                                ------------>AtMYB77 -ATERF1(1)              <---------SPL7 <---------ANAC46   <---------At4g35610--------->ARR14(2) -RRTF1(1)             --------->At4g35610   ---------->DOF2            <---------DEAR3(1)--------->WRKY38(1) -RAP2.3(1)            <---------At4g35610<------ZmHOX2a(1)--------->At4g35610<---------ARR14(2)  --- -ERF1              <-------TEIL     --------->ALFIN1    <-----------RAV1(2)<---------DEAR3(2)   <---   cgacaacagtgacttcaacaagttcatcggccggtggaagtggaggagaaagagctgtttcagatgaatacaactcggcggtttcgtctccggtgactac  12031600                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                           --------->GLK1(1)                                                                          <---------AGP1                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                          <-----------ARR10                                                                          <---------ARR11(3)                                                                         <---------ARR14(1)     --------->ANAC58                                      --------->ARR14(2)     --------->ARR11(3)     --------->ANAC46                                 <---------PCF2     <---------CCA1(2)     --------->ANAC58                             <-------PIF5          --------->LBD16            --  <---------SPL7                              <---------At4g35610      <---------TOE1(2)           <- >HVH21                                  <---------YAB1    <---------ARR14(2)     <---------ARR11(3) ------>ATHB12                         <---------ICU4----------->HVH21<---------LBD16           <---- ------YAB1   >>>>>>>>>TBF1      ---------->ID1   ------->PIF5      --------->DEAR3(1) <---------HSFB2a(2)   tgattgtacgcaagaagaagaagacatggcgatttgtctcatcatgttagctcgtgggacagttcttccatcgccggatctcaagaactcgagaaaaatt  12031700  Previous    Next  AGI:  At2g28200.1    Description:  nucleic acid binding / transcription factor/ zinc ion binding. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G04390.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64839.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 12031226    to: 12032383    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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