Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------------AGL15                   --------------->AGL15                  <---------HSFB2a(2)      <---------ARR14(2)      --------->ARR14(2)          --------->TOE1(3)                                             -----     --------->GLK1(1)            --------->TOE2(3)                                          --------    <---------KAN4(2)     ----------->GT1                                      <---------YAB1--------   <---------GLK1(2) --------->AHL20(2)                                  ------->TEIL        -------- -------->DOF2    --------->HSFB2a(2)              <---------YAB1     <---------YAB1       --------->MYB52(1)   agaaagaatatccaattcttccaaaaaatagtaaaaccataaatgtccccattttcattttgtctatacaagatgaatgttatgctcgtttacaaacgaa  12001600                               <---------TOE2(3)                                                  <-- <---------GLK1(2)         --------->CCA1(2)                    --------------->AGL15             --- ---->MYB52(1)            <---------ARR11(3)                   ====================================== ->ANAC46       <---------ARR14(2)          <---------DAG2     ----------------->AG              ---- ->ANAC58       --------->ARR14(2)    <---------AtLEC2    <---------ICU4                    <-------- ->ANAC58 --------->YAB1  --------->ARR11(3)<----------DOF2  <-----------GT1                ---------   acagattagtaaacatagtattcggtgagatataatgtttccatgacttttttttgtcaatttttaccaaaaatgtttttgtctaagtctaacaaatatg  12001700                                                   --------->ARR11(3)                                                   <---------ARR11(3)                                                   <---------ARR14(3)                                                   --------->ARR14(3)                                                   <-----------ARR10                                                   --------->ARR14(2)     <---------ANAC55(2)                     --------->ANAC58     <---------TOE2(3)                       --------->ANAC46 -------------AGL15                          --------->ANAC58 ------------>AGL15                     --------->ARR14(2)                       <-----------GT1 =============MADS_MADS                 <---------ARR14(2)                   <---------AHL20(2) ------------->AGL1           <-----------------AGL1                        --------->AHL20(1) -ARR14(2)            <-------TEIL      <---------GLK1(2)         <---------AtLEC2              ----- >ARR14(2)      ---------->DOF2   --------->GLK1(2)<---------ARR14(2)       <---------AHL20(1) ------   ccctattaagtatgtccaaaaagatgcaagtttactaatctggatactcgcaatatcttctcgcatgagcatgacatatatatttactagtttagaataa  12001800                                                                                                  <--                                                                                                 <---                                                                                              <------                                                                                              -------                                                                                              <------                                                                                           <---------ICU4                                                                                        --------->YAB1                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(1)                                                                                      <---------AHL20(1)                                                                                <-----------GT1  <<<<                                                                           --------->ARR11(3)--------                                        --------->HSFC1(1)                 <---------ARR11(3)<-------    <-------TEIL                        <---------HSFB2a(2)             <---------TOE2(3) <---------YAB1 ---->DAG2         <-----------GT1      --------->HSFB2a(2)           ---------->DOF2 --------->AHL20(2) ---->DOF2 --------->YAB1               <---------HSFC1(1)   <-------TEIL <------ZmHOX2a(1)--------->YAB1   agttgatacgttctcatcatataacatattcaacgtctaattctagaatcgaggtcgaataagtccatggaataaaggatttttccaatataatcataat  12001900    <---------DOF5.7(2)                                                                 <---------ARR14(2)  <---------MYB52(1)                                                                    --------->ARR14(2)  --------->DOF5.7(2)                                                                   <---------ARR11(3) <-------GAMYB                                                                          <---------GLK1(2) --------->TOE1(3)                                                                      --------->ARR11(3) -------At5g28300                                                                   --------->YAB1 --------GT1                                                                        ---------->DOF2 --HAHB4                                                                  ---------->DOF2--------->ARR14(1) -->ATHB51                                                      ---------->DOF2    <---------ATHB12 ---ICU4                                                     --------->AHL20(2)------------>CBF <<<<<GT-2                                 ----------->GT1--------->AHL20(2) ----------->GT1 ->ICU4                        --------->AHL20(2)        <---------AHL20(2) --------->DAG2    <------ --YAB1      <----------DOF2   <---------AHL20(2)        --------->AHL20(2)--------->DAG2--------->GLK1(2)   taccgttaacgcgttctttttttgtttgtttgtttaatttgtattttgttataaaacaaataaataaaaaggaagaaaaaggtcaataaagattctcttt  12002000                                                                                      ------>MYB46(1)                                                                                    --------->MYB46(3)                                           *TSS            --------->ANAC58      <-----------GT1                                      -------->P           --------->ANAC58   --------->ATHB51                                     <---------ALFIN1    ---------->DOF2      <--------HAHB4                                    <---------ALFIN1  >>>>>>>>>RAP2.2         --------->YAB1                                 ---------->ID1     ------>MYB83              <---------ICU4                             <---------ANAC58       ------>MYB46(1)          <---------ATHB12                      <---------ANAC58------>MYB46(1) --------->TOE2(3)      --------->ICU4      <---------TOE2(3)      <---------ANAC58 ----------->HVH21            --------->ANAC46        -- ----DOF2             <---------ANAC58------>MYB83 --------->WOX13(1)  <-----------GT1------>MYB83<--   gatggaaaaaggtttcagacattttcttgagtcttgtcccaaccccttgtgaccaatctaaaagcaaatcaaattacccataattacccactaatacact  12002100                                    --------------->AGL15                             <-----------GT1                                    <---------------AGL15                  --------->At4g35610                                   --------->ANAC58         <------ZmHOX2a(1)----------->RAV1(1)                                   ----------------->AGL2 <---------TOE2(3)<---------At4g35610 ------->YAB1                      --------->ANAC58 ------>ZmHOX2a(2)      <---------ZAT2 -------YAB1 <-----------GT1<----------DOF2         ===============HOX2a_HOX2a--------->At4g35610   atcataagtcatatataactcactctctctctttctcaccctatttagaattgatccattgaggaagatggagagacagcagcaaaattatctacttagt  12002200                          ----------->GT1                         <---------TOE2(3)             <---------YAB1                  <---------ANAC46                     <---------AHL20(2)                  ----------->GT1               <----------DOF2                                     <                <---------ZAT14           ------>MYB46(1) <---------YAB1     ------>ZmHOX2a(1)     <-                --------->ZAT14           ------>MYB83 --------->AHL20(2)<---------ARR14(2)        <-               --------->ALFIN1      <-----------GT1<----------DOF2      --------->ARR14(2)   <------      --------->AtMYB61---------->DOF2   --------->WOX13(1)    --------->ATHB12           -----------   tggagtcaccaaaaccagtgtggtataaaggtaactaaatcaccaatctactttctttttattatcgattgctcaaatcctccaaactcaaactgtttat  12002300    <------MYB83    <------MYB46(1)  <--------P <---------ANAC58 <---------ANAC58                                                                        --------->ATHB12 <-------GAMYB                                                                       <---------ARR11(3) ---------MYB46(3)                                                                   --------->ARR11(3) --------YAB1                               <<<<<<<<<<<<<<<<<LFY               <---------------------WRI1 --------TOE2(3)                         --------->ANAC46                      <------NtERF2 ---AHL20(2)       --------->ARR11(3)    --------->ANAC58                  <------NtERF2 <---------ICU4 >GT1              <---------ARR11(3)    --------->ANAC58                <---------RAP2.6(2)    -----   tttggttggcagacaatagaagagcttagacattctcttcttcacacaacaatggagttagagcaaacaagaatggtggccagcgaagaactcattgcca  12002400                          ------>ZmHOX2a(2)                        --------->ARR14(2)                        <-----------ARR10                        --------->AGP1                        <---------ARR14(2)                        <---------ARR11(3)                        --------->ARR14(3)                        --------->ARR11(3)                        <---------ARR14(3)                    ---------->DOF2                                             --------->ARR14(2)                --------->ZAT2                                                  <---------ARR14(2)                <---------At4g35610                                             <---------GLK1(2)                <---------ZAT2                          ---------->DOF2        <------ZmHOX2a(1)                --------->At4g35610                    <---------REM1(1)   ---------->DOF2          ---------->DOF2<------ZmHOX2a(2)  ---------->DOF2             <-------TEIL<---------YAB1 ----->DOF2    ------->TEIL        ---------->DOF2---------->DOF2      --------->CCA1(2) <---------WRKY18(1)   aagacgaccagataatgcagctcaaagatcttctcaacaaagctatcaaagagaaagatgaagcacaagagagatacaaaaggattcttcttgaccaaaa  12002500  Previous    Next  AGI:  At2g28140.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16750.1); contains InterPro domain Protein of unknown function DUF1635 (InterPro:IPR012862) Range:  from: 12002043    to: 12003079    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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