Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <-------GAMYB                                                                   <---------MYB46(3)                                                                <------MYB46(1)                      --------->ATHB12                          <------MYB83                   --------->YAB1                              --------->MYB111(1)                  <-------TEIL                  ------->TEIL   --------->MYB59             <---------WOX13(1)   <---------AHL20(2)         <---------MYB52(1)          <---------YAB1 <-------TEIL          <-----------GT1 --------->MYB46(2) <---------HSFB2a(2) <---------YAB1         --------------->AtSPL8 --------->MYB111(2)        <------ --------->HSFB2a(2) --------->ICU4   --------->ANAC55(2) <---------TOE2(3)----------->GT1    -------   ctactagaaaacatgatggattcatgattcatctatatatatgtaatatgtacctgttttgatgttaggttgttgagaggtaaacccaagtttgtgatca  11986500                                                                                           ------>ZmHOX2a(2)                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                                                                                        --------->YAB1                                             <---------TOE1(3)                      ------>ZmHOX2a(2)                                             <---------TOE2(3)                     --------->CCA1(2)                                      <---------TOE2(3)                            <------ZmHOX2a(2)                                      <---------TOE1(3)                           <---------ARR11(3)                                --------->DAG2                                    <---------ARR14(2)                        ---------->DOF2      <---------YAB1                       <---------AGP1 ----                     --------->ANAC58 <---------TOE1(2)                           --------->ARR11(3) ---YAB1      <---------ICU4   ---------->DOF2  <--------P                        --------->AGP1 <--- -->ICU4 <-------TEIL--------->ANAC58 <---------TOE2(2)        <----------DOF2    --------->ARR14(2)   tggattttagattcaaacatggcacgagaagcgaaaagcttaggtttatggttagtaagaagatgctttgatatggaagtagaagatctatgatcttgat  11986600                                                                   <---------ANAC58                                                     --------------->AGL15                                                     <---------------AGL15                                                    ================================MADS_MADS                                                    <-------TEIL   <---------ANAC58                                                    ----------------->AGL2                                                    ------>ZmHOX2a(2)                                                    ----------------->AGL3                                                  <---------ARR14(2)                 <-----------GT1                --------->ANAC58     <------ZmHOX2a(1)     ---------->ID1      <---------GLK1(2)       ---------->DOF2               ======================HOX2a_HOX2a         --------->ARR11(3)   --------->ETT(2)                  =====================HOX2a_HOX2a          <---------ARR11(3)   <---------ETT(2)   --------->AHL20(2)          --------->ARR14(2)          <---------RVE1(1) ----->YAB1     --------->ANAC58    ----------->GT1<------ZmHOX2a(2)<---------------AGL15 ------ICU4 ------------------------>ANAC81      <------ZmHOX2a(1) <---------ANAC46<-----------GT1   catggtcgacaaagaaggaagcaaaaaaatagagagtgaggataaaacagaggatccatttgtagtattgcttaaaacagagatttttctctgttcttct  11986700                                                          <-------GAMYB                                                         --------->MYB111(2)                                                         <---------MYB46(3)                                                         --------->MYB55(2)                                                        <--------P                                                       <-------GAMYB                                                      <---------MYB46(3)                                                   <---------At4g35610                                                   --------->At4g35610                                                   --------->ZAT2                                              <---------ANAC46                 <---------MYB46(3)                                     ------->TEIL  <---------ZAT2             <---------WOX13(1)                              --------->LBD16 <---------ANAC58             <---------YAB1         <---------bZIP60(1) <---------LBD16  <---------ANAC58        --------->HSFC1(2)         --------->bZIP60(1)<---------LBD16   ----------->RAV1(2)     <---------HSFC1(2) ----------->GT1   atgtttatgtgttgtcatcgttcttgtttctccgggatgaatcttatggcctgagctggttgttgaattcgaaacatctgattgttgggattagttaata  11986800                                                                                                    <                                                                                                    -                                                   <---------TOE1(3)                          -------                            --------->ALFIN1       <---------TOE2(3)                       <---------ICU4                 <------ZmHOX2a(1)     --------->DAG2                       <---------WOX13(1)<------        <------MYB46(1) <---------ANAC46  --------->ALFIN1        --------->ALFIN1  --------->ZAT6 --        <------MYB83   <---------LBD16---------->DOF2<------ZmHOX2a(1)    --------->ATHB12--------->ICU4   gggtttaagttggtgaagaggagttttcgggtttgggagataaagtggagattaaggaatagaagaaggtggagaaagattgatgaagactactaattaa  11986900                                                <---------AHL20(2)                                                <---------ICU4                                                --------->AHL20(2)                                                --------->ATHB51                                                <--------ATHB1                                               --------->ICU4                                            <---------YAB1                                          --------->YAB1          --------->WRKY38(1)           --------->AHL20(2) ----------DOF2                   --------->AtLEC2                                         <---------ANAC58 ----->ZmHOX2a(1)            --------->ANAC58  <---------YAB1                              <---------ANAC58 -->AHL20(2)                 --------->ANAC58--------->YAB1            <------MYB83<-----------GT1 ---AHL20(2)  *TSS     <---------ARR11(3)<---------AHL20(2)            <------MYB46(1)     <---------ANAC46 ------->TOE2(3)       --------->ARR11(3)--------->AHL20(2)   <-------GAMYB    <----------DOF2   tcctttaccttgttgactcttaagagatgttaagccattcaaatttataataatttcttcatttcgttgtatttggtgtttcttttttctgtttcttgtg  11987000              <-------MYC2              ------->MYC3                        <---------AHL20(2)                               <-              ------->MYC4                    <---------AHL20(2)                              -------              ------->MYC2                    --------->AHL20(2)               <---------ARR11(3) ---              <-------MYC3                <---------RVE1(1)                    --------->ARR11(3) <--         <---------AHL20(2)               <---------CCA1(1)             --------->AHL20(2)    <------     <---------YAB1   --------->DAG2     <---------ARR11(3)             <---------AHL20(2)    -------  <-----------GT1    ---------->DOF2     --------->ARR11(3)     --------->AHL20(1)           --------   gatttttctaattacatgtgccaaaaagtcgtatttttgtatagatatttatatatatgttagaaatatatgatataaatagatattccatacaatttta  11987100               ---------->DOF2            --------->ANAC46            --------->ANAC55(2)        <-----------GT1     ------->TEIL --------AHL20(2) -->AHL20(1)--------->ANAC55(1) ------>AHL20(2)                     ----------->GT1 -------AHL20(2)                   <---------ANAC46 ---AHL20(2)--------->ANAC58       <---------ANAC58                                                 - -->AHL20(2)--------->ANAC58       <---------AtLEC2        ---------->DOF2                      ----- ->AHL20(2) <---------ANAC55(2)    <---------ANAC58  --------->REM1(1)--------->YAB1<---------ARR14(2)   ttaaatgaatttacacgtaaagagactcaatctatttgcatgtaaaaaaaaacttacatctcaaagtgacaatgacaaattttgcatattttgtgaagtt  11987200                     <----------DOF2                     <---------DAG2                    <-----------------AGL3                     <---------TOE2(3)      ----------->HVH21       ---------->DOF2            ------>MYB83 <---------TOE2(3) <-------TEIL                        --------->TOE2(3)            --------->ATHB12 --------->DOF2 <---------ANAC58         <---------LBD16 ------>MYB46(1)       <------ZmHOX2a(1) ------>GT1     <---------ANAC58----------->GT1        <---------MYB59     <------ZmHOX2a(2)   gttaaagtatgacaccttaggtgctttatgtgaaaagtatattttcggactctcaaacctaatatgaggtttttgggatcaggacgttattggattaatg  11987300                                                                                --------->ICU4                                                                              <---------AHL20(2)                                                                              <---------ICU4                                                                             --------->AHL20(2)                     ---------->DOF2                                      <---------YAB1                   <---------AHL20(2)                            <---------AHL20(2)                 <---------YAB1               ---------->DOF2--------->ICU4--------->YAB1                --------->AHL20(1) ----------->TGA1        --------->YAB1--------->AHL20(2)               <---------AHL20(2)<---------ICU4           <---------YAB1--------->CCA1(2)               --------->AHL20(2)--------->YAB1         --------->YAB1 --------->ARR11(3)               --------->ATHB51 <---------ATHB12     --------->YAB1---------->DOF2 <---------YAB1<---            --------->YAB1<----------ID1---------->DOF2<---------YAB1  <---------ARR11(3)<-----------RAV1(1)   ctcatacaattcaagaattattttaaagaggccaaacatgacgaaagaaaaagaaccatgataatatttaaaagatataataaatatgaaaatgttggat  11987400  Previous    Next  AGI:  At2g28110.1    Description:  FRA8 (FRAGILE FIBER8); transferase. similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT5G22940.1); similar to secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] (GB:AAX33322.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) Range:  from: 11985021    to: 11986914    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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