Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->MYB52(1)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                                                 --------->ANAC55(2)                                                                                 <---------ANAC55(2)                                                                                <------NtERF2                                                                              <---------DEAR3(1)                                                                             --------->At4g35610                                                                             <---------At4g35610                                                                             <---------ZAT2                <-----------ARR10           --------->ALFIN1                 --------->ATERF1(1) ----                --------->ARR14(2)       --------->DAG2                     <---------ATERF1(1)  ---- ------->GT1    <---------ARR14(2)      ---------->DOF2                    <---------DEAR3(1)    <--- ----ARR14(2)   --------->GLK1(2) ---------->DOF2                          <---------RAP2.6(2)  ----- -ANAC46   <---------ZAT14 <---------MYB52(1)        <----------ID1       --------->RAP2.6(3) <------   agagaatagagactggagtatctgtctcggtttcttcaaaggaaaagtggagaagacgacgaaaatgggtttcagagacggctgcgtaacagaagggagt  11981300       <---------MYB46(3)      <---------AtMYB61      --------->ALFIN1    <------MYB83    <------MYB46(1)--------------->AtSPL3   <---------DEAR3(1)   --------->MYB111(2)      <----------DOF2                                               --------->ARR11(3)   <---------AtMYB61   <-------TEIL                     <---------DAG2                    <---------AHL20(1)   --------->ALFIN1------->TEIL                        <---------ANAC58                --------->AHL20(2) ----->ZAT14       --------------->AtSPL8              <---------ANAC58           <------ZmHOX2a(2) ----->REM1(2)   <---------ZAT14             --------->TOE2(3)                   --------->ARR11(3)<- ------ZAT14     --------->ZAT14         <----------DOF2<----------DOF2          <---------ARR11(3)<- ---->ALFIN1     <---------ZAT18<---------YAB1------>ZmHOX2a(1)                <---------YAB1      -- ---ANAC46     <---------------AtSPL3    ------>ZmHOX2a(1)               <---------YAB1<---------AHL20(2)   gtagggaggtggttcacagtgtacgtacaactttgttatagtcctttccttactcttgctttttctatttttgttttcattaagatcatttatatattca  11981400                                                  --------->AHL20(1)                                                  <---------AHL20(2)              --------->AHL20(2)         <---------AHL20(2)  --------->AHL20(2)                     --------->AHL20(2)                                      ----  <---------AHL20(2)                    --------->AHL20(2)                                   <------- --------AHL20(1)                      <---------YAB1                                 ----------->GT1 --------ARR11(3)                 ----------->GT1 --------->AHL20(2)      ------>ZmHOX2a(1)  -------- ------->AHL20(1)           --------->AHL20(2)   --------->AHL20(2)   --------->GLK1(2)  >>>>>>>>>GT-1   atatttttttaaaaaatgaaataagttctattaaacaggttattaaaaaaaaaaaattgttagtaatttgagattcctatttttgttttggttaataatg  11981500                                                                                    <---------YAB1                                                                                  --------->ATHB12                                                                                  <---------ICU4                                                                                  --------->YAB1                                  --------->AHL20(2)                              <--------HAHB4                                --------->ANAC58                                 <---------YAB1                                --------->ANAC58                                 <---------ATHB12                            --------->AtLEC2                                     --------->ICU4      <------MYB83        <---------ANAC58                                    <---------AHL20(2)      <------MYB46(1)     <---------ANAC58    <---------AHL20(2)       <---------ARR11(3) ------->GT1       --------->AHL20(2)        --------->YAB1          <---------AHL20(2) --ICU4            <---------AHL20(2)        --------->AHL20(2)     --------->AHL20(2) ->YAB1     --------->ZAT6<---------ANAC46--------->YAB1 --------->ICU4--------->ARR11(3)   tgtgaatttggtttacactaaaaaaatgtcgtgcaagaaaatactaataaaaatgagaaatgttgagaaaataaatctttttaatcattactagacagta  11981600                                                                                               <-----                                                ------------>CBF                               <-----                               --------->DAG2<---------AHL20(2)                                <-----                    --------->YAB1      --------->ICU4                                     <---------                   --------->AHL20(2)   <---------YAB1                                   <---------AHL20(2)       <----------DOF2    ----------->GT1<---------ICU4             ----------->GT1      <---------YAB1   gacatttttctttcaattccattaaaaatggaaaaattggtcatcatttattcaatgttatttagtcacatagttatactaaaaacaaatttttattgcg  11981700                                --------->TGA1a                                --------->O2                                --------->ANAC55(2)                                ===========================bZIP_DOF                                ===============bZIP_DOF                                --------->ANAC58                                ============================================bZIP_DOF                                <---------O2                                <---------TGA1a                      <---------YAB1                      --------->ICU4                    <---------ICU4                    --------->YAB1                   --------->ICU4               --------->MYB46(3)               <---------ATHB12 --------->ANAC46               <---------MYB55(2)               ------------>CBF <---------ANAC55(2)              --------->ANAC46  --------->ANAC58      <---------TOE2(3)         <---------bZIP60(1)  ========================================bZIP_DOF  <----------DOF2  <---------ATHB12     *TSS      --------->ANAC58 <---------AtLEC2  <---------ATHB51 ---------->DOF2                                        <--------- ----ANAC46   -------->P   <---------ICU4       ---------->DOF2                            --------->ANAC58 ----ANAC58   ------>MYB83 --------->YAB1      --------->AtMYB61                           --------->ANAC58 ----ANAC58   ============================MYC_MYB --------->ANAC58             ---------->DOF2 ---CBF       ------>MYB46(1)   --------->bZIP60(1)              ---------->DOF2   <------ZmHOX2a(1)   tttgcattaagtttccaaccaataatgaataatcacgtcaaagttagaaccaaagcaaaaaaaactaaaaagctcaagaagaaaaggatagagacgacaa  11981800                                                  ---------->DOF2                         >>>>>>>>>TBF1        <---------DOF5.7(2)                         <xxxxxxxxxxxxxxxxsmallRNA(i)                        <xxxxxxxxxxxxxxxxsmallRNA(i)                <---------YAB1                --------->MYB52(1)             --------------->AGL15          --------->ARR11(3)             --------->ICU4           --------->ANAC46                                    <----------          <---------ARR11(3)          --------->ANAC58        <---------ARR11(3)         <---------ATHB12 -ID1     --------->ARR11(3)          --------->ANAC58        --------->ARR11(3)------->TEIL   <-----   aactccattgaagaacttattagagaagaagaacaacaacaaggaagataacgaaagtcactaaaatctttcaagacccatgaactctcaaatcactctt  11981900                                                 <---------ICU4                                   ---                                                <---------YAB1                                   ----                                              <---------ICU4                                 ------>ZmHOX2a(1)                                              --------->YAB1                    <-----------GT1  ----    <<<<<<<<<TBF1                          --------->YAB1        --------->ANAC58            ======== <<<<<<<<<TBF1                     --------->TOE2(3)             --------->ANAC58            ======== -GT1  <<<<<<<<<TBF1            <---------CCA1(2)--------->ZAT6<---------ALFIN1 <---------At5g28300-- -----DOF2         ------>ZmHOX2a(1)      <-------TEIL       --------->AtMYB61 <-----------GT1-------   ttcttcttcttcttctcaatcctctccctctcccaaatctcaaattcatcatcactactaaaaccacacccatgtccaattttacccctcccatcctccc  11982000                                                             --------->MYB46(3)                                                             --------->DEAR3(1)                                                             --------->DREB2C(2)    --------->DAG2                                                    <---------ALFIN1               ---------->DOF2                     <-------TEIL                 ----------->RAV1(1)           --------->LBD16 <---------At4g35610 ======================HOX2a_HOX2a      --------->DEAR3(2)<------NtERF2 --------->At4g35610 ------>ZmHOX2a(2)            ------>MYB83                --------->At4g35610 ------->DOF2       =======================HOX2a_HOX2a  <-----------HVH21    --------->MYB52(1) ------->RAV1(1)    <------ZmHOX2a(2)             ------>MYB46(1)          --------->ZAT18 ----->MYB52(1)    <---------ARR14(2)           --------->MYB46(3)----------------->AGL1 ==========================HOX2a_HOX2a          <---------MYB59   <-----------------AGL1 ===========================HOX2a_HOX2a        --------->ANAC58------>MYB46(1)<---------LBD16 ------->MYB46(3)  --------->ARR14(2)          --------->ANAC58------>MYB83<---------ABI4(2) -->ANAC46   <---------ZAT2         ------>ZmHOX2a(1)  <----------DOF2 --------->ALFIN1   -------->P   aacagctccaatggcaactcggatccatggccatgttcctccattttggacccaacactttcaccgactccgaatggggcaccggaaaagctaacccatc  11982100                                                                                                 ----                                                                                                <----                                                                 --------->LBD16                -----                                                                --------->LBD16           --------->ICU4                                                               <---------LBD16            <---------YAB1                                  <---------PCF2              >>>>>>>>>>E2Ff        --------->MYB46(3)                            <---------WRKY12                  >>>>>>>>>>E2Fa       --------->ANAC58                      ------->GAMYB                           >>>>>>>>>>E2Fb       --------->ANAC58                     --------->ANAC58                         >>>>>>>>>>E2Fc   <---------At4g35610        --------->ANAC46 --------->ANAC58                     >>>>>>>>>>E2Fd   <---------ZAT2   <----        ----------->HVH21--------->ANAC58                 <----------DOF2      --------->At4g35610     -------->P      --------->ANAC46                <-----------RAV1(2)  ------>ZmHOX2a(1)--------->ATHB12    <-----------GT1  --------->ANAC58         ---------->DOF2 >>>>>>>>>>E2Fe   --------->ZAT2<-------   cattttcaacccgacccatctcaacgcaagtcaatgggtccaaatcgctaaagactcaggcttttcccgcgttatcctcacagctaagcaccatgatgga  11982200  Previous    Next  AGI:  At2g28100.1    Description:  ATFUC1 (ALPHA-L-FUCOSIDASE 1); alpha-L-fucosidase. Identical to Alpha-L-fucosidase 1 precursor (FUC1) [Arabidopsis Thaliana] (GB:Q8GW72;GB:Q9ZUV2); similar to unnamed protein product [Vitis vinifera] (GB:CAO16771.1); contains InterPro domain Glycoside hydrolase, family 29 (alpha-L-fucosidase); (InterPro:IPR000933); contains InterPro domain Galactose-binding like (InterPro:IPR008979); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 11981740    to: 11983677    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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