Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->ARR11(3)                                                                                      --------->GLK1(2)                               ------>ZmHOX2a(2)                                 ----------->ARR10                 <---------ZAT14                    <---------HSFB2a(1)        --------->REM1(2)                 --------->ZAT14                    --------->HSFC1(2)       --------->LBD16                ----------->HVH21           <-------GAMYB                    <------NtERF2              ----------->RAV1(2)----------->HVH21  <---------HSFC1(2)     <---------LBD16              <---------LBD16<---------ARR14(2)     --------->HSFB2a(1) <---------ANAC58    ---------->DOF2<---------ANAC46        <---------MYB46(3)           <---------ANAC58        -----   gcatcacaaagggttcccctgaagtggaatggatcgtgaccgtctcggttgccaaggttcccttggaataggttgtgtccgcgtagataatcttgtaatg  11942100                                                              <---------ANAC58                                                              <---------ANAC46                 <----------DOF2                              <---------ANAC58              ------->TEIL                                 <------ZmHOX2a(1)                 <-------TEIL         <-------GAMYB                        <---------HSFC1(2)                       --------->ANAC58   --------->GLK1(1)         <---------TOE2(3)--------->HSFB2a(1)              <---------MYB52(1)   <---------GLK1(1)    <----------DOF2       <---------HSFB2a(1)--------->ARR14(2)    --------->ANAC58 ---->YAB1<---------MYB52(1) <---------TOE1(3)--------->HSFC1(2) <---------ARR14(2)    --------->ANAC46   acaagagttcccgttgcatcttttttctttgaaggttgaagaattcgaagggtcgaatataggagcgtattggctgtagcagttagtacaaggcatacat  11942200                                                         --------->DEAR3(2)                    ============================HOX2a_HOX2a ------>MYB83                    ------>ZmHOX2a(1)               <---------------AtSPL8           <-----------HVH21              --------->HSFB2a(2)          <---------bZIP60(1)             <---------HSFB2a(2)<---------ANAC46          --------->bZIP60(1)            ==================HOX2a_HOX2a   <---------------AGL15                 ------>ZmHOX2a(2)<---------MYB59                        ----  ----------------->AGL3         --------->At4g35610<---------------AtSPL3                      -----  <-----------------AGL1         <---------At4g35610<------ZmHOX2a(1) <-------TEIL   <---------REM1(1)  ----------------->AGL1  <---------CCA1(2)  ---------->DOF2------>MYB46(1)      --------->ARR11(3)   tgtgtccatatgaggtcacttcctgtgtctatctccgcttcgatctcgaaaggaggagtaccgacttgtagtttcattagatagatgttgtagtcaaata  11942300                                                                                                    -          --------->DAG2                                                                          <--         --------->SPL7                                                                        <-----       <---------SPL7                                                                         <------      <---------ANAC46                                                                       <------- <---------ARR14(2)                                                                          <------- --------->ARR14(2)                          <---------HSFB2a(2)                       <---------REM1(1) --------->MYB52(1)        <---------At4g35610                                       --------->YAB1 - ----->DAG2            --------->AtLEC2      --------->HSFB2a(2)           <------ZmHOX2a(2) <------- ----->DOF2  --------->ALFIN1   <----------DOF2                 --------->SPL7   <---------WRKY12 <--   aagtatcggcgtaaggtgatgctccttgcaactgatttttggacagtcgagaagaagatgaattcgaacgacgctggatcaagtcaatggtgaagccgtg  11942400   <---------bZIP60(2) ---------->HVH21                                               <-------GAMYB -------At4g35610                              ---------->DOF2 <---------MYB46(3) ----MYB52(1)                       --------->ATHB12          <---------TOE2(3) -----HVH21                         <---------ICU4            <---------YAB1                     <--- --ANAC58   <---------MYB46(3)     --------->ICU4        --------->YAB1                      -------- --ANAC58  --------->ALFIN1        <---------ATHB12      <---------ICU4          <---------WOX13(1) -------->ALFIN1              --------->ANAC55(2)        --------->ATHB12       <------------CBF<---- --ANAC46  <---------AtMYB61  <---------ANAC55(2)       <---------YAB1         --------->ATHB12 ----- -------ANAC46    --------->REM1(2)<---------YAB1       <------ZmHOX2a(2)   <------------CBF --------   aggtgatgaggcagtggtcgtgaagagagaacatgtaatgatttgaagaaaaagaacgatcattgtggttgcaagagacattgattgatatcgaataata  11942500                                                                            --------->ICU4                                                                           <------------CBF                                                                         --------->ICU4                                                  <---------AHL20(2)     <---------YAB1 ------YAB1                                ------->TEIL          <----------DOF2 ->AHL20(2)                             --------->AtLEC2      <---------ARR11(3) -----AHL20(1)                   <---------AHL20(2)           --------->ARR11(3) ---->AHL20(1)                   --------->AHL20(2) <-----------GT1   ---------->ID1   ------------>CBF ->YAB1       ------------>CBF --------->TOE2(3)<-----------TBP <---------DAG2    <---------TOE2(3)   tttttggtttttcagacacaatgtaatgttcttcattaattcatgcacatatttatacatgttagaccttttgtcgtaattgttaagttttcaattttgt  11942600                           <---------ANAC58                           <---------ANAC55(2)                           <---------ANAC46                           --------->ANAC55(2)                           <---------ANAC55(1)                           <---------ANAC58                 <------------CBF        <---------ANAC46               <---------YAB1          --------->ALFIN1     <-----------GT1                 <--------      ------------>CBF  <---------MYB52(1)        <-----------GT1             <-----------GT1      <-   caacttcgttcaattttgttattgccattacgtcttctaacttgggggaattttacattttgttactactaagttttatttttctctctaggttttacat  11942700                 <---------------AGL15           <---------DAG2                                         <---------ANAC46      <---------WOX13(1)                                          <---------ANAC58     <------------CBF                                             <---------ANAC58    <<<<<<<<<RAP2.2                                             --------->ARR11(3)        <---------YAB1   <---------TOE2(3)--------->ICU4                              <---------AHL20(2)     --------->ARR11(3) ---GT1    <----------DOF2                                  <---------AHL20(2)      <---------TOE2(3) ---------DOF2   --------------->AGL15                  ----------->GT1            ---------->DOF2  -   tcttttagattgactttttgtattaatggaaattagatgatcaccttgctatagcaaaatgtataatttcttggaaattttagtctaaagttattgttga  11942800                                                                               ------>MYB83                                                                               ------>MYB46(1)  --------->TOE1(3)             <---------ARR11(3)                             -------->P  --------->TOE2(3)             --------->ARR11(3)                            ------>ZmHOX2a(1)  <---------MYB59     <---------YAB1                                <-----------GT1 ------>TEIL        <----------DOF2              --------->TOE2(3)---------->DOF2                 <--   tgaacctaaaattcaaaatatacttttatagatagatattggttttggataacttaatcttcttgccataaaaccatctcctacctatggtatctcacca  11942900                                                             <-----------GT1                                                          --------->YAB1                                                          <---------ICU4                                                         --------->ICU4                                                   ----------->GT1                    ---------->DOF2                                                  <------ZmHOX2a(1)                <----------DOF2                                             --------->MYB55(2)                  --------->ZAT18                                             <---------MYB46(3)                  <---------ZAT18                                  --------->MYB52(1)  <---------AHL20(2) <---------ANAC46          <---------YAB1     --------->ZAT18--------->ALFIN1 --------->YAB1<---------ZAT2 -------GLK1(2)    --------->TOE1(2)     <---------DEAR3(1) <---------YAB1 --------->ZAT2          --   gagtctgaagttatatttgaacatatgagagggctcaaacggctcggtgggaggagttaattatcacaacttgtggctgctagggctctaaagaggtttg  11943000  Previous    Next  AGI:  At2g28030.1    Description:  aspartyl protease family protein. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT2G28010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70772.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 11941285    to: 11942463    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version