Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <-----------ARR10                        <--------P                     --------->LBD16                     <---------MYB46(3)                    <---------ANAC58                                                                <     --------->GLK1(2)----------->GT1     <------MYB83                                              - -------YAB1        <---------ANAC58      <------MYB46(1)            <---------AHL20(2)          <--- --->ICU4           <---------ANAC46  --------->ZAT2              ------->TEIL         <XXXXXXXXXXXXX ----DOF2    <-----------GT1          <---------ZAT2    --------->ANAC46               <-----------GT1   atgagagtttctgttttacttagcgggtaaatctactctaagctaggtgttttcatccacttaacatgtattttataatctcatggttttcacaagtctt  11933100                <------MYB46(1)                <------MYB83                 --------->AHL20(1)       <---------ICU4                        <---------AHL20(2)      --------->ICU4       <-----------GT1   <---------AHL20(1) ---------------AtSPL8  <---------ICU4       --------->AHL20(2)                               <------ -------------->AtSPL8 --------->ICU4       --------->AHL20(2)                  <---------GLK1(2) ------AHL20(2)--------->MYB59    <----------DOF2                 --------->AHL20(2)    <---------ARR11(3) XXXXXXXMIR1888<---------AtMYB61  <---------MYB52(1)              <---------AHL20(2)    --------->ARR11(3)   aaattgtacttattagtttggtctaaatattactccctttgtttcattatattggatgttttagggattttattttgtttcagattataagatgttttac  11933200                    >>>>>>>>>>WRKY63              --------->AHL20(2)              <---------AHL20(2)             <---------AHL20(1)                                <---------AHL20(2)             --------->AHL20(1)                            --------->YAB1             <---------AHL20(2)                           <---------YAB1          <-----------GT1        --------->AHL20(2)                           --------->YAB1          --------->TOE2(3)        <---------AHL20(2)                          <---------YAB1         <---------ARR11(3)  --------->AHL20(2)<-----------GT1  <---------AHL20(2) <---------ICU4     --------->GLK1(2) -----GT1    --------->AHL20(2)      --------->AHL20(2)--------->ICU4<-----------GT1        ---------   aagtttaaatttaaatttaatttgactatttgtgactatttatattttgcagttttcattatcattttttttaacaaaatctaaatactattttttatat  11933300                <-----------GT1                ------->TEIL             --------->ANAC55(2)         ------>MYB46(1)     ---------->DOF2                                            <---------ARR14(2)         ------>MYB83     --------->TOE2(3)                <-------TEIL                 ------->TEIL       <---------MYB59    --------->TOE1(3)            <---------------AtSPL8           --------->ARR14(2) >AHL20(2)   <---------ANAC55(2)           <---------AHL20(2)               ----------->GT1   acaaaatgacctaatatgtatccatttaccttaaacctcttatattttaaaacagagtgagtacattcagtaagagaatggataaaaacgaatttggaat  11933400                                   <------------CBF                                  -------->ATHB1                               --------------->AGL15                               <---------------AGL15                              ---------->DOF2                <---------ANAC58  --------->ATHB51                          <------MYB83           --                <---------ANAC46  --------->ATHB12                          <------MYB46(1)       <--                <---------ANAC58 <---------YAB1                             ----------->GT1      <---         ---------->DOF2      <-----------------AGL3                       --------->MYB46(2)   <----        --------->YAB1        <-----------------AGL2                       --------->MYB111(1)  -----       <---------YAB1         ----------------->AGL3 <----------ID1        --------->MYB111(2)<------   acacaaactataaaagtttcttgagtactgtttctattattgggccataaacagtgagacaaacaggcccatagaagtaggtgaaaaaggcttattaaga  11933500                                        ------>ZmHOX2a(1)                                        <----------DOF2                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    <---------ARR11(3)                                    --------->ARR14(2)                                    <---------ARR14(2)                                 --------->HSFB2a(2)                                 <---------HSFB2a(2)                            <---------HSFC1(2)                            --------->HSFB2a(1)                            <---------HSFB2a(1)                            --------->HSFC1(2)                           --------->ARR11(3)                           <---------ARR14(2)                           --------->GLK1(2) ------->MYB52(1)          <-----------ARR10                                                 <------- -------WRKY12             --------->ARR14(2)                                             ------>ZmHOX2a(1) ---ZmHOX2a(2)             <---------ARR11(3)                                         <---------ALFIN1 -----ARR11(3)            *TSS  <---------LBD16    <---------At4g35610            -------->P -------- ---->ARR11(3)            <---------GLK1(2)        <---------ZAT2             --------->TOE2(3)<----- ---YAB1       <---------YAB1  ----------->RAV1(2) --------->At4g35610        --------->TOE1(3)------   tcaacggttctctcgttacgaatgcaaagaatcttctggatcctttttctctcagctactctctccatttatctaataaaccctaacccctcctcccaca  11933600                                                ------>ZmHOX2a(1)                                           --------->KAN4(2)                                          <---------HSFB2a(1)                                          <---------HSFC1(2)                                          --------->HSFC1(2)                                          <---------KAN4(1)                          <---------At4g35610                                  ------>MYB46(1)      --------->At4g35610           --------->At4g35610                                  ------>MYB83 --------->TOE2(3)                  --------->ATERF1(1)                     <---------ANAC58--------->HSFB2a(2)                          <------NtERF2                     --------->TOE2(3)    --------->KAN4(1)                      <---------SPL7        --------->ZAT6------>ZmHOX2a(1)   --------->HSFB2a(1)                   <---------ANAC46 --ALFIN1            <---------ANAC58<---------HSFB2a(2)        <----------DOF2 <---------ANAC58 --->RAV1(1)   <---------ALFIN1  --------->WOX13(1)  --------->DAG2             <---------RAP2.6(2) ----ALFIN1   --------->MYB46(3)--------->AtMYB61   ---------->DOF2             <---------ANAC58 --->ANAC46  -------->P      --------->ANAC46 ----------------->AGL3       <---------ICU4   ctattcgtttacactaaccacttccttatccacaccaatccagaacgttcctcaaaaagctccctccttttctctcaaaatggcgtctgcaaacgctctc  11933700             ------>ZmHOX2a(1)         --------------->AtSPL8         <-----------HVH21      <-------TEIL             --------->TOE2(3)      ------>NtERF2          ----------->GT1           ------>MYB46(1)      <---------ATERF1(1)    --------->At4g35610       ------>MYB83     --------->DEAR3(1)    <-----------RAV1(2)       <---------MYB59    --------->ATERF1(1)   <---------MYB52(1)      <-----------GT1      ---------->DOF2        -------   --------->LBD16       <-----------HVH21    <----------DOF2<---------At4g35610           <---------   ------>NtERF2         <-----------TGA1 ---------->ID1 --------->TOE1(3)             --------->YAB1   <---------ATERF1(1)  --------->ANAC46<---------MYB46(3)------>ZmHOX2a(1)          ------->TEIL   <   tcttccgcctccgtcctctgttcttcccgtcaggtacaaagtttgttcctttttaccttccttagctacttactaaagaagaaaatgaatcatctttcat  11933800                                                                --------->ATHB12                                                              <----------DOF2                       <                  <-----------GT1                           ----------->GT1                     -----          <---------WOX13(1)<---------ZAT6           --------------->AGL15             <---------WOX13(1) -->YAB1--------->ATHB12<---------ZAT14              <---------------AGL15           --------->ATHB12 -DOF2 <---------YAB1   --------->ZAT14              ================================================ ----------DOF2  ----------->HVH21                  <-----------------AGL2      ---------->DOF2<-----   tactttgttttgattggatttgacccttcagtgttatctattttcaaaaacctttctctatctggtttattgggtttttgaagaaagtgattgaatttga  11933900                                                     <------MYB46(1)                                                     <---------MYB46(3)                                                    --------->MYB111(2)                                                    <---------AtMYB61                                                    <---------MYB46(3)                                                    <---------DEAR3(1)                                                    --------->ALFIN1                                                    --------->MYB111(1)                                         <------MYB83<------MYB83                                         <------MYB46(1)                                  <---------------AGL15                                  --------------->AGL15                                 <-----------------AGL2                                 <-----------GT1    --------->MYB46(2)                                 <-----------------AGL3                 <---------YAB1                                 <-----------------AGL1                <---------AHL20(2)                                 ====================================================MADS_MADS                             <---------DAG2         --------->MYB55(2)<---------ICU4 <---------MYB52(1)          <----------DOF2       <--------P        <---------------AGL15 ----------DOF2             <---------ANAC58       <---------MYB55(1)--------------->AGL15 ----->ID1                  <---------ANAC58      <-------GAMYB     <-----------------AGL3        <-- =================================================MADS_MADS    ----------->GT1                 <----- ------GT1   <------------------------ANAC81  <---------LBD16 --------->DAG2                 --------   ccctttagtttgttctgtttcaattcaattgcttttctctatttggtttctgggttggtgagaaaaggttaatttttatgggaattagaagaaactgatt  11934000  Previous    Next  AGI:  At2g28000.1    Description:  CPN60A (chloroplast / 60 kDa chaperonin alpha subunit); ATP binding / protein binding / unfolded protein binding. Identical to RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor [Arabidopsis Thaliana] (GB:P21238;GB:Q42554); similar to EMB3007 (EMBRYO DEFECTIVE 3007), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G18820.1); similar to RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (GB:P34794); similar to RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subu Range:  from: 11933526    to: 11936466    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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